© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g7683.t1 |
| Gene name | |
| Location | scaffold_055:112064..114101 |
| Strand | - |
| Gene length (bp) | 2037 |
| Transcript length (bp) | 1839 |
| Coding sequence length (bp) | 1839 |
| Protein length (aa) | 613 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06398 | Pex24p | Integral peroxisomal membrane peroxin | 1.8E-104 | 55 | 425 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 71 | 93 | 22 |
| 2 | 108 | 130 | 22 |
| 3 | 213 | 235 | 22 |
| Orthofinder run ID | 3 |
| Orthogroup | 7918 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g7683.t1 MAALEDIPWIDSMAPSSSTQDHADSQPPTVAAFSPTTISGSSVTSRQRSSIIVHRKSPLLVATPPQITRALAYSH PFILPLNKLVGLLTWTTGDGWQSFLLVAGFWTLVLYGDVIVTWTGPLLVVISLILGMYWRRYSPLSSRAHLSEKQ GHQRAASETFPHRHETLDEIVETLRTFTTRCNILLEPLVEFTDFLSTQRTATSATTRPALTTLFFRILFVTPIWI ALTLPPLYLITTRRVIMTLGTIILTYHSRPARVSRVILWRSLTIRRICSIITGLSFSSTVDKAQSLLMQSQGHAM SIATRRRGDSSGVRFTFVIYENQRRWLGIGWTYSLFPSERAAWTDEHLNHVPSKEEFELPGVANGNAQWRWVEGS DWRIEGADESGKSDAKADGGGWVYYDNKWNDGRRGQDGWDRYTRRRKWCRDAELVEIPSAGESTSVETKSGIAQS LEQEKAANAHEKEISSTVDADAESLAPSTSSKSRKRRWFGSTKSVSDKASSISSAPPTSTNNSSVDLGKLKSATP TGSYTPTGKSTATATRPISIPHARKMSNHSGGSASHSSSFGREGSIREKEMSLAQDRLDRWGTRATGGTERAERE MGLGDEVNMGLS* |
| Coding | >Ani_SJS100_1|g7683.t1 ATGGCAGCTCTCGAAGATATTCCGTGGATAGATTCCATGGCCCCATCATCATCCACGCAGGACCATGCTGACTCT CAGCCTCCGACGGTCGCTGCTTTCTCCCCCACCACCATCTCAGGCTCGTCCGTGACATCGAGACAGCGCTCCAGC ATCATCGTGCATCGCAAATCGCCGCTACTGGTGGCCACGCCCCCTCAGATCACCCGGGCATTGGCCTACTCGCAT CCGTTTATTCTCCCCTTGAACAAGCTCGTTGGATTGCTCACATGGACGACCGGAGACGGTTGGCAGAGCTTCCTG CTGGTAGCGGGATTCTGGACGCTGGTTCTCTATGGCGACGTGATCGTTACTTGGACCGGGCCACTCCTCGTGGTC ATTAGCCTTATTCTGGGCATGTACTGGAGACGCTACTCCCCGCTGTCGTCGAGGGCTCACTTGAGTGAGAAGCAA GGCCATCAGAGGGCTGCTTCGGAGACATTTCCTCATCGGCATGAAACGTTGGACGAAATAGTCGAGACGCTACGG ACATTTACCACACGTTGCAATATTCTCCTGGAGCCACTCGTTGAATTTACCGACTTCTTATCCACGCAGAGGACG GCGACTTCTGCCACTACCCGACCAGCTCTTACGACATTATTCTTTCGAATCCTCTTCGTGACCCCAATCTGGATC GCCTTGACTCTTCCGCCGTTGTATCTGATCACCACTCGCCGAGTCATCATGACACTCGGCACCATCATTCTCACC TATCACTCTCGCCCGGCAAGAGTATCTCGTGTCATTCTTTGGCGATCGTTAACAATCCGCCGGATATGCTCTATA ATTACGGGGCTATCCTTCTCTTCTACTGTTGATAAGGCGCAGTCGCTGTTAATGCAGAGCCAGGGCCATGCAATG AGCATTGCGACAAGACGTCGAGGAGACTCCTCCGGTGTACGATTTACCTTTGTCATCTATGAAAACCAACGTCGT TGGCTTGGGATCGGCTGGACGTACTCTCTGTTCCCTTCCGAGCGAGCTGCTTGGACAGACGAGCATTTAAATCAC GTCCCGTCGAAGGAGGAATTCGAGTTACCCGGTGTCGCAAACGGCAATGCTCAGTGGCGCTGGGTCGAAGGGAGT GACTGGCGTATTGAAGGGGCCGACGAGTCAGGAAAGTCGGATGCCAAAGCCGATGGCGGAGGCTGGGTCTACTAT GACAATAAGTGGAATGACGGTCGTCGTGGCCAAGATGGTTGGGATCGATACACCCGTCGTCGGAAGTGGTGTCGT GACGCCGAACTAGTTGAGATTCCATCAGCGGGCGAGAGCACCTCAGTGGAGACTAAATCGGGGATCGCTCAATCA TTGGAGCAGGAAAAGGCAGCTAACGCCCACGAAAAAGAAATCTCATCTACGGTCGACGCCGACGCAGAAAGTCTC GCCCCGTCAACCTCATCCAAGTCCCGCAAACGACGTTGGTTTGGGAGTACGAAGAGTGTAAGCGACAAAGCCAGC AGCATCTCCTCTGCTCCACCAACGTCCACGAATAACTCCTCCGTAGATCTCGGAAAATTAAAGTCCGCCACCCCT ACCGGCAGCTACACGCCAACTGGGAAGTCCACCGCAACTGCAACCCGACCCATCAGTATTCCGCACGCCCGGAAG ATGTCCAATCACTCGGGAGGCAGCGCCAGTCACAGCAGCAGCTTCGGCCGTGAGGGAAGTATCAGGGAGAAAGAG ATGTCTCTTGCTCAGGATCGTCTGGACCGCTGGGGCACTCGCGCCACGGGGGGTACTGAACGAGCCGAGCGAGAG ATGGGGTTAGGTGATGAGGTCAATATGGGATTGAGCTGA |
| Transcript | >Ani_SJS100_1|g7683.t1 ATGGCAGCTCTCGAAGATATTCCGTGGATAGATTCCATGGCCCCATCATCATCCACGCAGGACCATGCTGACTCT CAGCCTCCGACGGTCGCTGCTTTCTCCCCCACCACCATCTCAGGCTCGTCCGTGACATCGAGACAGCGCTCCAGC ATCATCGTGCATCGCAAATCGCCGCTACTGGTGGCCACGCCCCCTCAGATCACCCGGGCATTGGCCTACTCGCAT CCGTTTATTCTCCCCTTGAACAAGCTCGTTGGATTGCTCACATGGACGACCGGAGACGGTTGGCAGAGCTTCCTG CTGGTAGCGGGATTCTGGACGCTGGTTCTCTATGGCGACGTGATCGTTACTTGGACCGGGCCACTCCTCGTGGTC ATTAGCCTTATTCTGGGCATGTACTGGAGACGCTACTCCCCGCTGTCGTCGAGGGCTCACTTGAGTGAGAAGCAA GGCCATCAGAGGGCTGCTTCGGAGACATTTCCTCATCGGCATGAAACGTTGGACGAAATAGTCGAGACGCTACGG ACATTTACCACACGTTGCAATATTCTCCTGGAGCCACTCGTTGAATTTACCGACTTCTTATCCACGCAGAGGACG GCGACTTCTGCCACTACCCGACCAGCTCTTACGACATTATTCTTTCGAATCCTCTTCGTGACCCCAATCTGGATC GCCTTGACTCTTCCGCCGTTGTATCTGATCACCACTCGCCGAGTCATCATGACACTCGGCACCATCATTCTCACC TATCACTCTCGCCCGGCAAGAGTATCTCGTGTCATTCTTTGGCGATCGTTAACAATCCGCCGGATATGCTCTATA ATTACGGGGCTATCCTTCTCTTCTACTGTTGATAAGGCGCAGTCGCTGTTAATGCAGAGCCAGGGCCATGCAATG AGCATTGCGACAAGACGTCGAGGAGACTCCTCCGGTGTACGATTTACCTTTGTCATCTATGAAAACCAACGTCGT TGGCTTGGGATCGGCTGGACGTACTCTCTGTTCCCTTCCGAGCGAGCTGCTTGGACAGACGAGCATTTAAATCAC GTCCCGTCGAAGGAGGAATTCGAGTTACCCGGTGTCGCAAACGGCAATGCTCAGTGGCGCTGGGTCGAAGGGAGT GACTGGCGTATTGAAGGGGCCGACGAGTCAGGAAAGTCGGATGCCAAAGCCGATGGCGGAGGCTGGGTCTACTAT GACAATAAGTGGAATGACGGTCGTCGTGGCCAAGATGGTTGGGATCGATACACCCGTCGTCGGAAGTGGTGTCGT GACGCCGAACTAGTTGAGATTCCATCAGCGGGCGAGAGCACCTCAGTGGAGACTAAATCGGGGATCGCTCAATCA TTGGAGCAGGAAAAGGCAGCTAACGCCCACGAAAAAGAAATCTCATCTACGGTCGACGCCGACGCAGAAAGTCTC GCCCCGTCAACCTCATCCAAGTCCCGCAAACGACGTTGGTTTGGGAGTACGAAGAGTGTAAGCGACAAAGCCAGC AGCATCTCCTCTGCTCCACCAACGTCCACGAATAACTCCTCCGTAGATCTCGGAAAATTAAAGTCCGCCACCCCT ACCGGCAGCTACACGCCAACTGGGAAGTCCACCGCAACTGCAACCCGACCCATCAGTATTCCGCACGCCCGGAAG ATGTCCAATCACTCGGGAGGCAGCGCCAGTCACAGCAGCAGCTTCGGCCGTGAGGGAAGTATCAGGGAGAAAGAG ATGTCTCTTGCTCAGGATCGTCTGGACCGCTGGGGCACTCGCGCCACGGGGGGTACTGAACGAGCCGAGCGAGAG ATGGGGTTAGGTGATGAGGTCAATATGGGATTGAGCTGA |
| Gene | >Ani_SJS100_1|g7683.t1 ATGGCAGCTCTCGGTAGGTGATACAAACAAATGCACTTTCTGACTCTGACAACTCTCCACTTCTTACATCCTTCG AATACCTGGTCCACGTGGACGAGCCGCTCTCATCCCACTACCGCCCCGAATACTAATGTCGCGACAGAAGATATT CCGTGGATAGATTCCATGGCCCCATCATCATCCACGCAGGACCATGCTGACTCTCAGCCTCCGACGGTCGCTGCT TTCTCCCCCACCACCATCTCAGGCTCGTCCGTGACATCGAGACAGCGCTCCAGCATCATCGTGCATCGCAAATCG CCGCTACTGGTGGCCACGCCCCCTCAGATCACCCGGGCATTGGCCTACTCGCATCCGTTTATTCTCCCCTTGAAC AAGCTCGTTGGATTGCTCACATGGACGACCGGAGACGGTTGGCAGAGCTTCCTGCTGGTAGCGGGATTCTGGACG CTGGTTCTCTATGGCGACGTGATCGTTACTTGGACCGGGCCACTCCTCGTGGTCATTAGCCTTATTCTGGGCATG TACTGGAGACGCTACTCCCCGCTGTCGTCGAGGGCTCACTTGAGTGAGAAGCAAGGCCATCAGAGGGCTGCTTCG GAGACATTTCCTCATCGGCATGAAACGTTGGACGAAATAGTCGAGACGCTACGGACATTTACCACACGTTGCAAT ATTCTCCTGGAGCCACTCGTTGAATTTACCGACTTCTTATCCACGCAGAGGACGGCGACTTCTGCCACTACCCGA CCAGCTCTTACGACATTATTCTTTCGAATCCTCTTCGTGACCCCAATCTGGATCGCCTTGACTCTTCCGCCGTTG TATCTGATCACCACTCGCCGAGTCATCATGACACTCGGCACCATCATTCTCACCTATCACTCTCGCCCGGCAAGA GTATCTCGTGTCATTCTTTGGCGATCGTTAACAATCCGCCGGATATGCTCTATAATTACGGGGCTATCCTTCTCT TCTACTGTTGATAAGGCGCAGTCGCTGTTAATGCAGAGCCAGGGCCATGCAATGAGCATTGCGACAAGACGTCGA GGAGACTCCTCCGGTGTACGATTTACCTTTGTCATCTATGAAAACCAACGTCGTTGGCTTGGGATCGGCTGGACG TACTCTCTGTTCCCTTCCGAGCGAGCTGCTTGGACAGACGAGCATTTAAATCACGTCCCGTCGAAGGAGGAATTC GAGTTACCCGGTGTCGCAAACGGCAATGCTCAGTGGCGCTGGGTCGAAGGGAGTGACTGGCGTATTGAAGGGGCC GACGAGTCAGGAAAGTCGGATGCCAAAGCCGATGGCGGAGGCTGGGTCTACTATGACAATAAGGTGGGACACATT GTTTCCCATTTTCTGACAAATGTCCAGGTTCCAGGGTTACTAACAGCATGGGAACAGTGGAATGACGGTCGTCGT GGCCAAGATGGTTGGGATCGATACACCCGTCGTCGGAAGTGGTGTCGTGACGCCGAACTAGTTGAGATTCCATCA GCGGGCGAGAGCACCTCAGTGGAGACTAAATCGGGGATCGCTCAATCATTGGAGCAGGAAAAGGCAGCTAACGCC CACGAAAAAGAAATCTCATCTACGGTCGACGCCGACGCAGAAAGTCTCGCCCCGTCAACCTCATCCAAGTCCCGC AAACGACGTTGGTTTGGGAGTACGAAGAGTGTAAGCGACAAAGCCAGCAGCATCTCCTCTGCTCCACCAACGTCC ACGAATAACTCCTCCGTAGATCTCGGAAAATTAAAGTCCGCCACCCCTACCGGCAGCTACACGCCAACTGGGAAG TCCACCGCAACTGCAACCCGACCCATCAGTATTCCGCACGCCCGGAAGATGTCCAATCACTCGGGAGGCAGCGCC AGTCACAGCAGCAGCTTCGGCCGTGAGGGAAGTATCAGGGAGAAAGAGATGTCTCTTGCTCAGGATCGTCTGGAC CGCTGGGGCACTCGCGCCACGGGGGGTACTGAACGAGCCGAGCGAGAGATGGGGTTAGGTGATGAGGTCAATATG GGATTGAGCTGA |