Protein ID | Ani_SJS100_1|g7683.t1 |
Gene name | |
Location | scaffold_055:112064..114101 |
Strand | - |
Gene length (bp) | 2037 |
Transcript length (bp) | 1839 |
Coding sequence length (bp) | 1839 |
Protein length (aa) | 613 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF06398 | Pex24p | Integral peroxisomal membrane peroxin | 1.8E-104 | 55 | 425 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 20 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 71 | 93 | 22 |
2 | 108 | 130 | 22 |
3 | 213 | 235 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g7683.t1 MAALEDIPWIDSMAPSSSTQDHADSQPPTVAAFSPTTISGSSVTSRQRSSIIVHRKSPLLVATPPQITRALAYSH PFILPLNKLVGLLTWTTGDGWQSFLLVAGFWTLVLYGDVIVTWTGPLLVVISLILGMYWRRYSPLSSRAHLSEKQ GHQRAASETFPHRHETLDEIVETLRTFTTRCNILLEPLVEFTDFLSTQRTATSATTRPALTTLFFRILFVTPIWI ALTLPPLYLITTRRVIMTLGTIILTYHSRPARVSRVILWRSLTIRRICSIITGLSFSSTVDKAQSLLMQSQGHAM SIATRRRGDSSGVRFTFVIYENQRRWLGIGWTYSLFPSERAAWTDEHLNHVPSKEEFELPGVANGNAQWRWVEGS DWRIEGADESGKSDAKADGGGWVYYDNKWNDGRRGQDGWDRYTRRRKWCRDAELVEIPSAGESTSVETKSGIAQS LEQEKAANAHEKEISSTVDADAESLAPSTSSKSRKRRWFGSTKSVSDKASSISSAPPTSTNNSSVDLGKLKSATP TGSYTPTGKSTATATRPISIPHARKMSNHSGGSASHSSSFGREGSIREKEMSLAQDRLDRWGTRATGGTERAERE MGLGDEVNMGLS* |
Coding | >Ani_SJS100_1|g7683.t1 ATGGCAGCTCTCGAAGATATTCCGTGGATAGATTCCATGGCCCCATCATCATCCACGCAGGACCATGCTGACTCT CAGCCTCCGACGGTCGCTGCTTTCTCCCCCACCACCATCTCAGGCTCGTCCGTGACATCGAGACAGCGCTCCAGC ATCATCGTGCATCGCAAATCGCCGCTACTGGTGGCCACGCCCCCTCAGATCACCCGGGCATTGGCCTACTCGCAT CCGTTTATTCTCCCCTTGAACAAGCTCGTTGGATTGCTCACATGGACGACCGGAGACGGTTGGCAGAGCTTCCTG CTGGTAGCGGGATTCTGGACGCTGGTTCTCTATGGCGACGTGATCGTTACTTGGACCGGGCCACTCCTCGTGGTC ATTAGCCTTATTCTGGGCATGTACTGGAGACGCTACTCCCCGCTGTCGTCGAGGGCTCACTTGAGTGAGAAGCAA GGCCATCAGAGGGCTGCTTCGGAGACATTTCCTCATCGGCATGAAACGTTGGACGAAATAGTCGAGACGCTACGG ACATTTACCACACGTTGCAATATTCTCCTGGAGCCACTCGTTGAATTTACCGACTTCTTATCCACGCAGAGGACG GCGACTTCTGCCACTACCCGACCAGCTCTTACGACATTATTCTTTCGAATCCTCTTCGTGACCCCAATCTGGATC GCCTTGACTCTTCCGCCGTTGTATCTGATCACCACTCGCCGAGTCATCATGACACTCGGCACCATCATTCTCACC TATCACTCTCGCCCGGCAAGAGTATCTCGTGTCATTCTTTGGCGATCGTTAACAATCCGCCGGATATGCTCTATA ATTACGGGGCTATCCTTCTCTTCTACTGTTGATAAGGCGCAGTCGCTGTTAATGCAGAGCCAGGGCCATGCAATG AGCATTGCGACAAGACGTCGAGGAGACTCCTCCGGTGTACGATTTACCTTTGTCATCTATGAAAACCAACGTCGT TGGCTTGGGATCGGCTGGACGTACTCTCTGTTCCCTTCCGAGCGAGCTGCTTGGACAGACGAGCATTTAAATCAC GTCCCGTCGAAGGAGGAATTCGAGTTACCCGGTGTCGCAAACGGCAATGCTCAGTGGCGCTGGGTCGAAGGGAGT GACTGGCGTATTGAAGGGGCCGACGAGTCAGGAAAGTCGGATGCCAAAGCCGATGGCGGAGGCTGGGTCTACTAT GACAATAAGTGGAATGACGGTCGTCGTGGCCAAGATGGTTGGGATCGATACACCCGTCGTCGGAAGTGGTGTCGT GACGCCGAACTAGTTGAGATTCCATCAGCGGGCGAGAGCACCTCAGTGGAGACTAAATCGGGGATCGCTCAATCA TTGGAGCAGGAAAAGGCAGCTAACGCCCACGAAAAAGAAATCTCATCTACGGTCGACGCCGACGCAGAAAGTCTC GCCCCGTCAACCTCATCCAAGTCCCGCAAACGACGTTGGTTTGGGAGTACGAAGAGTGTAAGCGACAAAGCCAGC AGCATCTCCTCTGCTCCACCAACGTCCACGAATAACTCCTCCGTAGATCTCGGAAAATTAAAGTCCGCCACCCCT ACCGGCAGCTACACGCCAACTGGGAAGTCCACCGCAACTGCAACCCGACCCATCAGTATTCCGCACGCCCGGAAG ATGTCCAATCACTCGGGAGGCAGCGCCAGTCACAGCAGCAGCTTCGGCCGTGAGGGAAGTATCAGGGAGAAAGAG ATGTCTCTTGCTCAGGATCGTCTGGACCGCTGGGGCACTCGCGCCACGGGGGGTACTGAACGAGCCGAGCGAGAG ATGGGGTTAGGTGATGAGGTCAATATGGGATTGAGCTGA |
Transcript | >Ani_SJS100_1|g7683.t1 ATGGCAGCTCTCGAAGATATTCCGTGGATAGATTCCATGGCCCCATCATCATCCACGCAGGACCATGCTGACTCT CAGCCTCCGACGGTCGCTGCTTTCTCCCCCACCACCATCTCAGGCTCGTCCGTGACATCGAGACAGCGCTCCAGC ATCATCGTGCATCGCAAATCGCCGCTACTGGTGGCCACGCCCCCTCAGATCACCCGGGCATTGGCCTACTCGCAT CCGTTTATTCTCCCCTTGAACAAGCTCGTTGGATTGCTCACATGGACGACCGGAGACGGTTGGCAGAGCTTCCTG CTGGTAGCGGGATTCTGGACGCTGGTTCTCTATGGCGACGTGATCGTTACTTGGACCGGGCCACTCCTCGTGGTC ATTAGCCTTATTCTGGGCATGTACTGGAGACGCTACTCCCCGCTGTCGTCGAGGGCTCACTTGAGTGAGAAGCAA GGCCATCAGAGGGCTGCTTCGGAGACATTTCCTCATCGGCATGAAACGTTGGACGAAATAGTCGAGACGCTACGG ACATTTACCACACGTTGCAATATTCTCCTGGAGCCACTCGTTGAATTTACCGACTTCTTATCCACGCAGAGGACG GCGACTTCTGCCACTACCCGACCAGCTCTTACGACATTATTCTTTCGAATCCTCTTCGTGACCCCAATCTGGATC GCCTTGACTCTTCCGCCGTTGTATCTGATCACCACTCGCCGAGTCATCATGACACTCGGCACCATCATTCTCACC TATCACTCTCGCCCGGCAAGAGTATCTCGTGTCATTCTTTGGCGATCGTTAACAATCCGCCGGATATGCTCTATA ATTACGGGGCTATCCTTCTCTTCTACTGTTGATAAGGCGCAGTCGCTGTTAATGCAGAGCCAGGGCCATGCAATG AGCATTGCGACAAGACGTCGAGGAGACTCCTCCGGTGTACGATTTACCTTTGTCATCTATGAAAACCAACGTCGT TGGCTTGGGATCGGCTGGACGTACTCTCTGTTCCCTTCCGAGCGAGCTGCTTGGACAGACGAGCATTTAAATCAC GTCCCGTCGAAGGAGGAATTCGAGTTACCCGGTGTCGCAAACGGCAATGCTCAGTGGCGCTGGGTCGAAGGGAGT GACTGGCGTATTGAAGGGGCCGACGAGTCAGGAAAGTCGGATGCCAAAGCCGATGGCGGAGGCTGGGTCTACTAT GACAATAAGTGGAATGACGGTCGTCGTGGCCAAGATGGTTGGGATCGATACACCCGTCGTCGGAAGTGGTGTCGT GACGCCGAACTAGTTGAGATTCCATCAGCGGGCGAGAGCACCTCAGTGGAGACTAAATCGGGGATCGCTCAATCA TTGGAGCAGGAAAAGGCAGCTAACGCCCACGAAAAAGAAATCTCATCTACGGTCGACGCCGACGCAGAAAGTCTC GCCCCGTCAACCTCATCCAAGTCCCGCAAACGACGTTGGTTTGGGAGTACGAAGAGTGTAAGCGACAAAGCCAGC AGCATCTCCTCTGCTCCACCAACGTCCACGAATAACTCCTCCGTAGATCTCGGAAAATTAAAGTCCGCCACCCCT ACCGGCAGCTACACGCCAACTGGGAAGTCCACCGCAACTGCAACCCGACCCATCAGTATTCCGCACGCCCGGAAG ATGTCCAATCACTCGGGAGGCAGCGCCAGTCACAGCAGCAGCTTCGGCCGTGAGGGAAGTATCAGGGAGAAAGAG ATGTCTCTTGCTCAGGATCGTCTGGACCGCTGGGGCACTCGCGCCACGGGGGGTACTGAACGAGCCGAGCGAGAG ATGGGGTTAGGTGATGAGGTCAATATGGGATTGAGCTGA |
Gene | >Ani_SJS100_1|g7683.t1 ATGGCAGCTCTCGGTAGGTGATACAAACAAATGCACTTTCTGACTCTGACAACTCTCCACTTCTTACATCCTTCG AATACCTGGTCCACGTGGACGAGCCGCTCTCATCCCACTACCGCCCCGAATACTAATGTCGCGACAGAAGATATT CCGTGGATAGATTCCATGGCCCCATCATCATCCACGCAGGACCATGCTGACTCTCAGCCTCCGACGGTCGCTGCT TTCTCCCCCACCACCATCTCAGGCTCGTCCGTGACATCGAGACAGCGCTCCAGCATCATCGTGCATCGCAAATCG CCGCTACTGGTGGCCACGCCCCCTCAGATCACCCGGGCATTGGCCTACTCGCATCCGTTTATTCTCCCCTTGAAC AAGCTCGTTGGATTGCTCACATGGACGACCGGAGACGGTTGGCAGAGCTTCCTGCTGGTAGCGGGATTCTGGACG CTGGTTCTCTATGGCGACGTGATCGTTACTTGGACCGGGCCACTCCTCGTGGTCATTAGCCTTATTCTGGGCATG TACTGGAGACGCTACTCCCCGCTGTCGTCGAGGGCTCACTTGAGTGAGAAGCAAGGCCATCAGAGGGCTGCTTCG GAGACATTTCCTCATCGGCATGAAACGTTGGACGAAATAGTCGAGACGCTACGGACATTTACCACACGTTGCAAT ATTCTCCTGGAGCCACTCGTTGAATTTACCGACTTCTTATCCACGCAGAGGACGGCGACTTCTGCCACTACCCGA CCAGCTCTTACGACATTATTCTTTCGAATCCTCTTCGTGACCCCAATCTGGATCGCCTTGACTCTTCCGCCGTTG TATCTGATCACCACTCGCCGAGTCATCATGACACTCGGCACCATCATTCTCACCTATCACTCTCGCCCGGCAAGA GTATCTCGTGTCATTCTTTGGCGATCGTTAACAATCCGCCGGATATGCTCTATAATTACGGGGCTATCCTTCTCT TCTACTGTTGATAAGGCGCAGTCGCTGTTAATGCAGAGCCAGGGCCATGCAATGAGCATTGCGACAAGACGTCGA GGAGACTCCTCCGGTGTACGATTTACCTTTGTCATCTATGAAAACCAACGTCGTTGGCTTGGGATCGGCTGGACG TACTCTCTGTTCCCTTCCGAGCGAGCTGCTTGGACAGACGAGCATTTAAATCACGTCCCGTCGAAGGAGGAATTC GAGTTACCCGGTGTCGCAAACGGCAATGCTCAGTGGCGCTGGGTCGAAGGGAGTGACTGGCGTATTGAAGGGGCC GACGAGTCAGGAAAGTCGGATGCCAAAGCCGATGGCGGAGGCTGGGTCTACTATGACAATAAGGTGGGACACATT GTTTCCCATTTTCTGACAAATGTCCAGGTTCCAGGGTTACTAACAGCATGGGAACAGTGGAATGACGGTCGTCGT GGCCAAGATGGTTGGGATCGATACACCCGTCGTCGGAAGTGGTGTCGTGACGCCGAACTAGTTGAGATTCCATCA GCGGGCGAGAGCACCTCAGTGGAGACTAAATCGGGGATCGCTCAATCATTGGAGCAGGAAAAGGCAGCTAACGCC CACGAAAAAGAAATCTCATCTACGGTCGACGCCGACGCAGAAAGTCTCGCCCCGTCAACCTCATCCAAGTCCCGC AAACGACGTTGGTTTGGGAGTACGAAGAGTGTAAGCGACAAAGCCAGCAGCATCTCCTCTGCTCCACCAACGTCC ACGAATAACTCCTCCGTAGATCTCGGAAAATTAAAGTCCGCCACCCCTACCGGCAGCTACACGCCAACTGGGAAG TCCACCGCAACTGCAACCCGACCCATCAGTATTCCGCACGCCCGGAAGATGTCCAATCACTCGGGAGGCAGCGCC AGTCACAGCAGCAGCTTCGGCCGTGAGGGAAGTATCAGGGAGAAAGAGATGTCTCTTGCTCAGGATCGTCTGGAC CGCTGGGGCACTCGCGCCACGGGGGGTACTGAACGAGCCGAGCGAGAGATGGGGTTAGGTGATGAGGTCAATATG GGATTGAGCTGA |