© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g7674.t1 |
| Gene name | |
| Location | scaffold_055:92346..93445 |
| Strand | - |
| Gene length (bp) | 1099 |
| Transcript length (bp) | 861 |
| Coding sequence length (bp) | 861 |
| Protein length (aa) | 287 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF20520 | Ac45-VOA1_TM | V0 complex accessory subunit Ac45/VOA1 transmembrane domain | 1.3E-17 | 236 | 275 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 19 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 242 | 264 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g7674.t1 MRLGSISLLALGATTASAIRDTSPFFLASTSQIPSTSAQLRTAPAILEDLSTGLSGCPSDYYVIASQPGVHSTDF ATRQSAPRLGAKMTGKDKNIRAKMIVNEVVGEIEAKDVQKLLEKECGAESTVIDASSDSYSADFAAESRIIVVDL PVLTVGSERKKQLSNNDGLLFNVIDQLPESKGYTILYVTSPRELEDTGSDFYQAEQDPLHMDLKRDYSAHDSQTP SSNKTLFQEYQFFTPGIWMGILATLVFLMIFYVGLAALLSLEVPYAAFEKDTSAAVQKKQQ* |
| Coding | >Ani_SJS100_1|g7674.t1 ATGCGTTTGGGAAGCATTTCGCTGCTCGCTCTGGGAGCGACGACGGCGAGCGCAATCCGCGACACCTCTCCCTTT TTCCTTGCATCGACCTCCCAGATCCCTTCTACGTCGGCACAGCTTCGGACTGCTCCCGCTATTCTAGAAGATCTT TCCACGGGGCTGAGCGGCTGCCCTTCCGACTACTATGTCATTGCTTCCCAGCCCGGTGTGCACAGCACCGACTTC GCTACCCGCCAGTCCGCACCGCGCCTCGGTGCGAAGATGACAGGAAAGGACAAGAACATCCGGGCAAAGATGATT GTGAATGAAGTAGTGGGCGAGATAGAGGCGAAGGATGTCCAGAAGCTGCTCGAGAAGGAGTGCGGGGCTGAATCG ACCGTGATCGACGCTTCCTCTGATTCTTACTCTGCCGATTTTGCTGCGGAGTCCCGTATCATCGTTGTTGACTTG CCCGTCCTGACTGTGGGATCTGAGCGGAAGAAGCAGCTTTCGAACAACGATGGCTTGCTCTTCAATGTCATTGAT CAACTCCCGGAATCCAAGGGCTACACGATCCTCTACGTCACGTCCCCGAGGGAACTTGAAGACACCGGTTCCGAT TTCTACCAAGCGGAGCAGGATCCCCTCCACATGGACCTCAAGCGCGACTACTCCGCTCATGACAGTCAAACCCCT TCGTCCAACAAGACGCTTTTCCAGGAATACCAATTCTTCACCCCAGGCATTTGGATGGGAATTCTTGCAACCTTG GTTTTCCTGATGATTTTCTATGTTGGACTGGCTGCTCTTCTGAGCTTGGAGGTTCCCTATGCAGCATTCGAGAAG GACACATCGGCCGCCGTGCAGAAGAAGCAGCAGTGA |
| Transcript | >Ani_SJS100_1|g7674.t1 ATGCGTTTGGGAAGCATTTCGCTGCTCGCTCTGGGAGCGACGACGGCGAGCGCAATCCGCGACACCTCTCCCTTT TTCCTTGCATCGACCTCCCAGATCCCTTCTACGTCGGCACAGCTTCGGACTGCTCCCGCTATTCTAGAAGATCTT TCCACGGGGCTGAGCGGCTGCCCTTCCGACTACTATGTCATTGCTTCCCAGCCCGGTGTGCACAGCACCGACTTC GCTACCCGCCAGTCCGCACCGCGCCTCGGTGCGAAGATGACAGGAAAGGACAAGAACATCCGGGCAAAGATGATT GTGAATGAAGTAGTGGGCGAGATAGAGGCGAAGGATGTCCAGAAGCTGCTCGAGAAGGAGTGCGGGGCTGAATCG ACCGTGATCGACGCTTCCTCTGATTCTTACTCTGCCGATTTTGCTGCGGAGTCCCGTATCATCGTTGTTGACTTG CCCGTCCTGACTGTGGGATCTGAGCGGAAGAAGCAGCTTTCGAACAACGATGGCTTGCTCTTCAATGTCATTGAT CAACTCCCGGAATCCAAGGGCTACACGATCCTCTACGTCACGTCCCCGAGGGAACTTGAAGACACCGGTTCCGAT TTCTACCAAGCGGAGCAGGATCCCCTCCACATGGACCTCAAGCGCGACTACTCCGCTCATGACAGTCAAACCCCT TCGTCCAACAAGACGCTTTTCCAGGAATACCAATTCTTCACCCCAGGCATTTGGATGGGAATTCTTGCAACCTTG GTTTTCCTGATGATTTTCTATGTTGGACTGGCTGCTCTTCTGAGCTTGGAGGTTCCCTATGCAGCATTCGAGAAG GACACATCGGCCGCCGTGCAGAAGAAGCAGCAGTGA |
| Gene | >Ani_SJS100_1|g7674.t1 ATGCGTTTGGGAAGCATTTCGCTGCTCGCTCTGGGAGCGACGACGGCGAGCGCAATCCGCGACACCTCTCCCTTT TTCCTTGCATCGACCTCCCAGTATGCGTGACACTTGCTCGATTGCGGGACGCCCGTAGAATGTCCAGCTAATCAG TATCTATAGGATCCCTTCTACGTCGGCACAGCTTCGGACTGCTCCCGCTATTCTAGAAGATCTTTCCACGGGGCT GAGCGGCTGCCCTTCCGACTACTATGTCATTGCTTCCCAGCCCGGTGTGCACAGCACCGACTTCGCTACCCGCCA GTCCGCACCGCGCCTCGGTGCGAAGATGACAGGAAAGGACAAGAACATCCGGGCAAAGATGATTGTGAATGAAGT AGTGGGCGAGATAGAGGCGAAGGATGTCCAGAAGCTGCTCGAGAAGGAGTGCGGGGCTGAATCGACCGTGATCGA CGCTTCCTGTAGGTGCTCCTTTGTGTATGAATGGTCGACAGATGAAGGGCGTGACTGACGGCAAATAATTAGCTG ATTCTTACTCTGCCGATTTTGCTGCGGAGTCCCGTATCATCGTTGTTGACTTGCCCGTCCTGACTGTGGGATCTG AGCGGAAGAAGCAGCTTTCGAACAACGGTAGGTGCTCCAAACATCTAGACTACTTGCCAGAGAGATGCTTATTGT CTTTGCAGATGGCTTGCTCTTCAATGTCATTGATCAACTCCCGGAATCCAAGGGCTACACGATCCTCTACGTCAC GTCCCCGAGGGAACTTGAAGACACCGGTTCCGATTTCTACCAAGCGGAGCAGGATCCCCTCCACATGGACCTCAA GCGCGACTACTCCGCTCATGACAGTCAAACCCCTTCGTCCAACAAGACGCTTTTCCAGGAATACCAATTCTTCAC CCCAGGTATGTGGAGCCGAAAATTGAGTTACTGTAGGACAATAACCTGACCGTTTACAGGCATTTGGATGGGAAT TCTTGCAACCTTGGTTTTCCTGATGATTTTCTATGTTGGACTGGCTGCTCTTCTGAGCTTGGAGGTTCCCTATGC AGCATTCGAGAAGGACACATCGGCCGCCGTGCAGAAGAAGCAGCAGTGA |