Protein ID | Ani_SJS100_1|g7672.t1 |
Gene name | |
Location | scaffold_055:87693..89226 |
Strand | + |
Gene length (bp) | 1533 |
Transcript length (bp) | 1218 |
Coding sequence length (bp) | 1218 |
Protein length (aa) | 406 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03124 | EXS | EXS family | 3.2E-98 | 16 | 382 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016021 | integral component of membrane | Yes |
GO:0005575 | cellular_component | No |
GO:0110165 | cellular anatomical entity | No |
GO:0031224 | intrinsic component of membrane | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 17 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 12 | 34 | 22 |
2 | 65 | 87 | 22 |
3 | 100 | 122 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g7672.t1 MGVDQHAQLDRFSLFLPFPYRVAVILLAGFWGWGVNLQYLLKANIDVPSLIKYPARQSSSQRPHYASTYQLSTLL TIPLAISLLIFWPATHGSAERVEAVEFIPQSYFFIGLFILILPFHRIARSGRYRFFMTLKRISLGGLAEAQDGKF GDILLADALTSYSRVFADLVVTFCMFFTTDVSSTSKPTRKCRTNDYVVPLIIAFPSIIRLRQCLIEYLRVRRATQ RSQGAGSQGGQHLANALKYATAFPVIILAAKLKNYNPLDFYGYSEMSLSRLLFFFTFINSAYSFYWDITKDWDLT LFTPARRSHEHPYGLRRHRYFTNRQYYLAIIIDLAIRFSWLSRYVPGFVWMSETEFGIFVLMFSEVARRWMWVFL RVEAEWIRNSRGPAPDDILLGEFGGKLDAD* |
Coding | >Ani_SJS100_1|g7672.t1 ATGGGTGTCGATCAACATGCTCAATTGGATCGCTTCAGTCTCTTCCTTCCCTTCCCCTATCGTGTGGCGGTAATA CTGCTGGCTGGTTTCTGGGGTTGGGGTGTTAATCTGCAGTACCTCCTAAAGGCAAATATTGATGTCCCTTCCCTG ATTAAATACCCTGCTCGACAATCCTCCAGTCAACGCCCGCATTATGCCTCGACATACCAGCTGTCCACTCTCCTG ACCATCCCGCTCGCCATCTCCCTCCTTATCTTCTGGCCCGCCACCCATGGCTCCGCGGAACGCGTCGAGGCGGTG GAATTTATTCCGCAATCATACTTCTTCATAGGACTGTTTATCCTCATCCTGCCCTTTCATCGAATCGCGCGCTCG GGCCGATATCGGTTCTTCATGACCCTGAAGCGCATCAGTCTTGGAGGTCTGGCGGAAGCGCAAGATGGCAAATTC GGGGATATTCTGCTGGCAGATGCTCTGACAAGTTATTCTAGAGTCTTCGCGGACTTGGTTGTTACCTTCTGCATG TTCTTTACCACGGACGTCTCCAGCACGTCCAAGCCCACCCGCAAGTGTCGCACGAACGACTACGTCGTTCCCTTG ATCATCGCTTTCCCCAGTATCATTCGACTGCGCCAATGTCTCATTGAATACTTGCGTGTGCGTCGGGCTACCCAG CGTAGCCAAGGCGCGGGCAGCCAGGGTGGCCAGCACTTGGCTAACGCCCTGAAGTACGCCACCGCGTTTCCAGTC ATCATCCTGGCAGCCAAGTTGAAGAACTACAACCCTCTGGATTTTTACGGCTACAGTGAGATGAGCCTTTCGCGG CTTTTGTTCTTCTTCACATTCATCAACTCCGCATACTCCTTCTATTGGGACATCACCAAGGATTGGGATTTGACC CTTTTTACTCCGGCACGCCGTAGCCACGAACACCCATACGGACTGCGCCGCCATCGCTACTTCACCAACCGACAG TACTACCTCGCGATCATCATTGATCTGGCCATCCGTTTCTCCTGGCTCTCTAGATATGTGCCCGGATTTGTCTGG ATGAGTGAGACCGAATTTGGAATTTTTGTCCTCATGTTCTCCGAGGTCGCCCGTCGGTGGATGTGGGTTTTCCTC CGCGTCGAGGCCGAGTGGATACGGAACAGCCGCGGTCCTGCCCCAGACGATATCCTCCTTGGCGAGTTTGGCGGC AAATTGGACGCAGACTGA |
Transcript | >Ani_SJS100_1|g7672.t1 ATGGGTGTCGATCAACATGCTCAATTGGATCGCTTCAGTCTCTTCCTTCCCTTCCCCTATCGTGTGGCGGTAATA CTGCTGGCTGGTTTCTGGGGTTGGGGTGTTAATCTGCAGTACCTCCTAAAGGCAAATATTGATGTCCCTTCCCTG ATTAAATACCCTGCTCGACAATCCTCCAGTCAACGCCCGCATTATGCCTCGACATACCAGCTGTCCACTCTCCTG ACCATCCCGCTCGCCATCTCCCTCCTTATCTTCTGGCCCGCCACCCATGGCTCCGCGGAACGCGTCGAGGCGGTG GAATTTATTCCGCAATCATACTTCTTCATAGGACTGTTTATCCTCATCCTGCCCTTTCATCGAATCGCGCGCTCG GGCCGATATCGGTTCTTCATGACCCTGAAGCGCATCAGTCTTGGAGGTCTGGCGGAAGCGCAAGATGGCAAATTC GGGGATATTCTGCTGGCAGATGCTCTGACAAGTTATTCTAGAGTCTTCGCGGACTTGGTTGTTACCTTCTGCATG TTCTTTACCACGGACGTCTCCAGCACGTCCAAGCCCACCCGCAAGTGTCGCACGAACGACTACGTCGTTCCCTTG ATCATCGCTTTCCCCAGTATCATTCGACTGCGCCAATGTCTCATTGAATACTTGCGTGTGCGTCGGGCTACCCAG CGTAGCCAAGGCGCGGGCAGCCAGGGTGGCCAGCACTTGGCTAACGCCCTGAAGTACGCCACCGCGTTTCCAGTC ATCATCCTGGCAGCCAAGTTGAAGAACTACAACCCTCTGGATTTTTACGGCTACAGTGAGATGAGCCTTTCGCGG CTTTTGTTCTTCTTCACATTCATCAACTCCGCATACTCCTTCTATTGGGACATCACCAAGGATTGGGATTTGACC CTTTTTACTCCGGCACGCCGTAGCCACGAACACCCATACGGACTGCGCCGCCATCGCTACTTCACCAACCGACAG TACTACCTCGCGATCATCATTGATCTGGCCATCCGTTTCTCCTGGCTCTCTAGATATGTGCCCGGATTTGTCTGG ATGAGTGAGACCGAATTTGGAATTTTTGTCCTCATGTTCTCCGAGGTCGCCCGTCGGTGGATGTGGGTTTTCCTC CGCGTCGAGGCCGAGTGGATACGGAACAGCCGCGGTCCTGCCCCAGACGATATCCTCCTTGGCGAGTTTGGCGGC AAATTGGACGCAGACTGA |
Gene | >Ani_SJS100_1|g7672.t1 ATGGGTGTCGATCAACATGCTCAATTGGATCGCTTCAGTCTCTTCCTTCCCTTCCCCTATCGTGTGGCGGTAATA CTGCTGGCTGGTATGCTACCCCCCCTTGGATGATCCCCCCCTCCTCTTATCCCCGGCATTTCATTCTGGCTAACA TTCGTTATCGATAGGTTTCTGGGGTTGGGGTGTTAATCTGCAGTACCTCCTAAAGGCAAATATTGTGGGTGATGC CCCTCCTTCTCCCTCCTCATCCTCCTTCCCTCCGCCTTCTTTTTTCTCTATAGTTATATACTTTCGCTGACTGGC ATCTCTTAGGATGTCCCTTCCCTGATTAAATACCCTGCTCGACAATCCTCCAGTCAACGCCCGCATTATGCCTCG ACATACCAGCTGTCCACTCTCCTGACCATCCCGCTCGCCATCTCCCTCCTTATCTTCTGGCCCGCCACCCATGGC TCCGCGGAACGCGTCGAGGCGGTGGAATTTATTCCGCAATCATACTTCTTCATAGGACTGTTTATCCTCATCCTG CCCTTTCATCGAATCGCGCGCTCGGGCCGATATCGGTTCTTCATGACCCTGAAGCGCATCAGTCTTGGAGGTCTG GCGGAAGCGCAAGATGGCAAATTCGGGGATATTCTGCTGGCAGATGCTCTGACAAGTTATTCTAGAGTCTTCGCG GACTTGGTTGTTACCTTCTGCATGTTCTTTACCACGGACGTCTCCAGCACGTCCAAGCCCACCCGCAAGTGTCGC ACGAACGACTACGTCGTTCCCTTGATCATCGCTTTCCCCAGTATCATTCGACTGCGCCAATGTCTCATTGAATAC TTGCGTGTGCGTCGGGCTACCCAGCGTAGCCAAGGCGCGGGCAGCCAGGGTGGCCAGCACTTGGCTAACGCCCTG AAGTACGCCACCGCGTTTCCAGTCATCATCCTGGCAGCCAAGTTGAAGAACTACAACCCTCTGGATTTTTACGGC TACAGTGAGATGAGCCTTTCGCGGCTTTTGTACGTGCTTTACATCTGTTTCCCGTCTTCTGCCAGTGGCTCCTGC TAACCGCGCTCTTTCAACTACAGGTTCTTCTTCACATTCATCAACTCCGCATACTCCTTCTATTGGGACATCACC AAGGATTGGGATTTGACCCTTTTTACTCCGGCACGCCGTAGCCACGAACACCCATACGGACTGCGCCGCCATCGC TACTTCACCAACCGACAGTACTACCTCGCGATCATCATTGATCTGGCCATCCGTTTCTCCTGGCTCTCTAGATAT GTGCCCGGATTTGTCTGGATGAGTGAGACCGAATTTGGAATTTTTGTCCTCATGTTCTCCGAGGTCGCCCGTCGG TGGATGTGGGTTTTCCTCCGCGTCGAGGCCGAGTGGAGTAAGTCACCCATCCATCTCACAAGCACGTTACCGTGG CACCTTTCAACTGACTCGTGGCAATCAACAACAGTACGGAACAGCCGCGGTCCTGCCCCAGACGATATCCTCCTT GGCGAGTTTGGCGGCAAATTGGACGCAGACTGA |