© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g7626.t1 |
| Gene name | |
| Location | scaffold_054:183712..184701 |
| Strand | - |
| Gene length (bp) | 989 |
| Transcript length (bp) | 828 |
| Coding sequence length (bp) | 828 |
| Protein length (aa) | 276 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 66 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 29 | 51 | 22 |
| 2 | 64 | 86 | 22 |
| 3 | 108 | 130 | 22 |
| 4 | 143 | 165 | 22 |
| 5 | 201 | 223 | 22 |
| 6 | 236 | 258 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g7626.t1 MPGGLHPPLSVMESWPARNTFNPESHGSASIVLPAIFGSIAVTAVILRLWARCVIQRQGKLDDFFIALALIPAIG LNISFPLGAYNYGENHHVWDNTLPQLLQSRKLAIAQELFYILASCFTKISVLLFYRRMGHRTTISPRFLNIIYLS IASVAAYTLAFFIVIWVACRPFSAYWMEVDPEYTATHKYKCYNEPVHLITATFISLLQDILATTLPAVLCWGLQM RLRQKVLLNGVVFGLGYLAAVVAGLGGLVLLGAGDVGSGCCGGVFVFAGG* |
| Coding | >Ani_SJS100_1|g7626.t1 ATGCCAGGGGGCCTGCATCCACCGCTGTCGGTCATGGAGTCATGGCCCGCGCGCAACACCTTCAACCCGGAATCC CATGGTTCAGCGTCCATTGTGCTTCCTGCTATCTTCGGATCCATCGCCGTCACGGCAGTCATACTTCGCCTCTGG GCACGCTGCGTCATTCAGCGACAGGGAAAACTTGATGACTTCTTCATCGCATTAGCACTCATCCCAGCCATCGGG CTCAACATCAGCTTCCCCCTCGGAGCCTACAACTACGGCGAAAACCACCACGTATGGGACAACACGCTCCCCCAA CTCCTCCAGTCGCGCAAACTCGCCATCGCGCAAGAACTCTTCTACATCCTCGCCTCGTGCTTCACCAAGATCTCC GTGCTACTTTTCTACCGCCGCATGGGCCACCGCACCACCATCTCCCCTCGCTTCCTCAACATCATCTACCTCAGC ATCGCCAGCGTAGCAGCCTACACGCTCGCCTTCTTCATAGTAATCTGGGTCGCCTGTCGTCCGTTCTCAGCTTAC TGGATGGAAGTCGACCCCGAGTATACCGCCACGCACAAGTACAAATGTTACAATGAACCTGTGCATTTGATCACC GCGACGTTTATAAGTCTTCTGCAGGATATTCTGGCCACGACACTGCCGGCGGTGCTTTGCTGGGGCTTGCAGATG AGGTTGAGGCAGAAGGTGTTGTTGAATGGGGTGGTGTTTGGGTTGGGGTATTTGGCTGCTGTTGTGGCTGGGTTG GGAGGTTTGGTATTGTTGGGTGCTGGCGATGTTGGAAGTGGATGTTGCGGTGGGGTGTTCGTGTTTGCCGGGGGT TAA |
| Transcript | >Ani_SJS100_1|g7626.t1 ATGCCAGGGGGCCTGCATCCACCGCTGTCGGTCATGGAGTCATGGCCCGCGCGCAACACCTTCAACCCGGAATCC CATGGTTCAGCGTCCATTGTGCTTCCTGCTATCTTCGGATCCATCGCCGTCACGGCAGTCATACTTCGCCTCTGG GCACGCTGCGTCATTCAGCGACAGGGAAAACTTGATGACTTCTTCATCGCATTAGCACTCATCCCAGCCATCGGG CTCAACATCAGCTTCCCCCTCGGAGCCTACAACTACGGCGAAAACCACCACGTATGGGACAACACGCTCCCCCAA CTCCTCCAGTCGCGCAAACTCGCCATCGCGCAAGAACTCTTCTACATCCTCGCCTCGTGCTTCACCAAGATCTCC GTGCTACTTTTCTACCGCCGCATGGGCCACCGCACCACCATCTCCCCTCGCTTCCTCAACATCATCTACCTCAGC ATCGCCAGCGTAGCAGCCTACACGCTCGCCTTCTTCATAGTAATCTGGGTCGCCTGTCGTCCGTTCTCAGCTTAC TGGATGGAAGTCGACCCCGAGTATACCGCCACGCACAAGTACAAATGTTACAATGAACCTGTGCATTTGATCACC GCGACGTTTATAAGTCTTCTGCAGGATATTCTGGCCACGACACTGCCGGCGGTGCTTTGCTGGGGCTTGCAGATG AGGTTGAGGCAGAAGGTGTTGTTGAATGGGGTGGTGTTTGGGTTGGGGTATTTGGCTGCTGTTGTGGCTGGGTTG GGAGGTTTGGTATTGTTGGGTGCTGGCGATGTTGGAAGTGGATGTTGCGGTGGGGTGTTCGTGTTTGCCGGGGGT TAA |
| Gene | >Ani_SJS100_1|g7626.t1 ATGCCAGGGGGCCTGCATCCACCGCTGTCGGTCATGGAGTCATGGCCCGCGCGCAACACCTTCAACCCGGAATCC CATGGTTCAGCGTCCATTGTGCTTCCTGCTATCTTCGGATCCATCGCCGTCACGGCAGTCATACTTCGCCTCTGG GCACGCTGCGTCATTCAGCGACAGGGAAAACTTGATGACTTCTTCATCGCATTAGCACTCGTAAGCCAACCCTCT CCTAACACAACCCAACACCTTCTAACCAACAATCCCCAGATCCCAGCCATCGGGCTCAACATCAGCTTCCCCCTC GGTACCTACACCACCTGTCCCACCAACCCAACCCCCAACTAACAAAATACTCTTAAAGGAGCCTACAACTACGGC GAAAACCACCACGTATGGGACAACACGCTCCCCCAACTCCTCCAGTCGCGCAAACTCGCCATCGCGCAAGAACTC TTCTACATCCTCGCCTCGTGCTTCACCAAGATCTCCGTGCTACTTTTCTACCGCCGCATGGGCCACCGCACCACC ATCTCCCCTCGCTTCCTCAACATCATCTACCTCAGCATCGCCAGCGTAGCAGCCTACACGCTCGCCTTCTTCATA GTAATCTGGGTCGCCTGTCGTCCGTTCTCAGCTTACTGGATGGAAGTCGACCCCGAGTATACCGCCACGCACAAG TACAAATGTTACAATGAACCTGTGCATTTGATCACCGCGACGTTTATAAGTCTTCTGCAGGATATTCTGGCCACG ACACTGCCGGCGGTGCTTTGCTGGGGCTTGCAGATGAGGTTGAGGCAGAAGGTGTTGTTGAATGGGGTGGTGTTT GGGTTGGGGTATTTGGCTGCTGTTGTGGCTGGGGTTAGGGTGTGGTTTTTGTATCGCATGTTTTATGTCAGTTAC GATACTAGTTGGGAGGTTTGGTATTGTTGGGTGCTGGCGATGTTGGAAGTGGATGTTGCGGTGGGGTGTTCGTGT TTGCCGGGGGTTAA |