Protein ID | Ani_SJS100_1|g7590.t1 |
Gene name | |
Location | scaffold_054:62986..65476 |
Strand | + |
Gene length (bp) | 2490 |
Transcript length (bp) | 1623 |
Coding sequence length (bp) | 1623 |
Protein length (aa) | 541 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF14099 | Polysacc_lyase | Polysaccharide lyase | 2.6E-14 | 76 | 216 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 20 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 216 | 238 | 22 |
2 | 314 | 336 | 22 |
3 | 346 | 365 | 19 |
4 | 385 | 407 | 22 |
5 | 433 | 455 | 22 |
6 | 511 | 533 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g7590.t1 MISILSLLSLSLFHNLAHAGTIYHSNFTSSLSPFSACNVESPSYSTATDGNLTVYFDESYYDGTRDRKGAEICVF EDGTSTNVPQMTKEGWQGFSIYVPSDTYPTDKSAIIAQQFCPGGCSSWCGTVEIVNNTLQTTHRAACSTGTTATL VDDIERDAWHSVVVHMRVSEESEGAYEVWWDGEQVYSVEDIDVGFGTWDDNDTLTTGWYFKNGEYCFGIFLVFFT VFAFGLAINWVAYTCAEVIATLAAIEDPNSNSTPYIHLDNETTNPDDPELSTITTSKPITSDFRTAINHLRTLGG GGFFSTFRGFRMYLAFIWLDAGLALLIPMFIPVPIHMGLVSFMTDFIGRMFLATWQTAWVHVVIADKSPMVSYRR MLGYQHWRRIAPVAVLHNVVMSVTYSVNLAASRFVGRVIWVILGGEHGKGSSGGNAEGGIGVVLLIMFFLLLTVP VKAIFTRVAASMLPEGLDPILPFDRRFGGKVIPEGGSETLSIMEAWTTFEWSARVRYFKVFLKALALEVALGVLG GLLVIGELKWLLYSH* |
Coding | >Ani_SJS100_1|g7590.t1 ATGATCTCCATTCTCTCGCTACTATCCCTCTCTCTCTTCCACAACCTCGCCCATGCAGGCACCATCTATCACAGC AACTTCACCTCTTCCCTATCCCCCTTCTCCGCCTGCAATGTAGAATCCCCATCCTACTCCACCGCCACTGACGGA AACCTGACCGTCTACTTCGACGAGTCCTACTACGACGGTACCCGCGATCGCAAAGGCGCTGAGATATGCGTCTTT GAGGACGGCACTAGCACCAACGTGCCCCAAATGACCAAGGAAGGCTGGCAGGGCTTTTCTATCTATGTGCCGTCG GACACGTACCCGACGGACAAGAGCGCCATCATTGCGCAGCAATTCTGCCCCGGCGGGTGCTCCTCGTGGTGTGGC ACCGTCGAGATCGTGAATAATACTCTACAGACTACACACCGCGCAGCTTGTTCCACTGGCACGACGGCGACTCTT GTGGATGATATTGAGAGAGATGCTTGGCATAGTGTTGTGGTGCATATGCGTGTGTCTGAGGAAAGTGAAGGGGCT TATGAGGTTTGGTGGGATGGGGAGCAGGTGTATAGTGTGGAGGATATTGATGTGGGATTTGGTACTTGGGATGAT AATGATACGTTGACCACCGGGTGGTATTTTAAGAATGGGGAGTATTGTTTTGGCATCTTTCTCGTCTTCTTCACT GTTTTTGCTTTCGGCCTTGCAATAAATTGGGTCGCCTACACCTGCGCGGAAGTCATCGCAACCCTAGCCGCAATC GAAGACCCCAACTCCAACTCAACTCCCTACATCCACCTCGACAACGAAACTACCAACCCCGATGACCCCGAACTC AGCACCATCACAACCTCCAAGCCAATAACCAGCGACTTCCGCACAGCAATCAACCACCTCCGAACGCTCGGCGGC GGCGGTTTCTTCTCAACCTTCCGCGGATTCCGAATGTATCTCGCCTTCATCTGGCTAGACGCAGGCTTAGCCCTT TTAATCCCAATGTTCATCCCCGTTCCCATCCACATGGGCCTCGTCTCTTTCATGACCGACTTTATCGGCAGAATG TTCCTCGCTACGTGGCAAACGGCATGGGTTCATGTAGTCATTGCTGATAAATCCCCTATGGTCAGCTATCGACGA ATGCTGGGCTATCAGCATTGGAGAAGAATCGCTCCTGTTGCTGTTCTGCATAATGTTGTCATGTCTGTGACTTAC TCGGTGAATCTGGCTGCCTCTAGGTTTGTTGGGAGGGTTATTTGGGTCATTCTTGGTGGTGAGCATGGGAAGGGG TCGAGTGGTGGAAATGCAGAGGGAGGGATTGGCGTTGTTCTCCTGATAATGTTCTTTTTATTGCTTACTGTGCCT GTTAAGGCGATATTCACTCGTGTGGCTGCTTCGATGTTGCCTGAGGGACTTGATCCGATTTTGCCGTTTGATCGG CGGTTTGGTGGTAAGGTGATACCGGAGGGTGGGAGCGAGACTCTGAGTATCATGGAGGCGTGGACAACGTTTGAA TGGTCTGCTCGAGTTCGATATTTTAAGGTTTTTCTCAAGGCGCTTGCTCTTGAGGTCGCACTTGGTGTTCTTGGA GGTCTCTTGGTTATTGGGGAGTTGAAGTGGTTGCTTTATTCTCACTGA |
Transcript | >Ani_SJS100_1|g7590.t1 ATGATCTCCATTCTCTCGCTACTATCCCTCTCTCTCTTCCACAACCTCGCCCATGCAGGCACCATCTATCACAGC AACTTCACCTCTTCCCTATCCCCCTTCTCCGCCTGCAATGTAGAATCCCCATCCTACTCCACCGCCACTGACGGA AACCTGACCGTCTACTTCGACGAGTCCTACTACGACGGTACCCGCGATCGCAAAGGCGCTGAGATATGCGTCTTT GAGGACGGCACTAGCACCAACGTGCCCCAAATGACCAAGGAAGGCTGGCAGGGCTTTTCTATCTATGTGCCGTCG GACACGTACCCGACGGACAAGAGCGCCATCATTGCGCAGCAATTCTGCCCCGGCGGGTGCTCCTCGTGGTGTGGC ACCGTCGAGATCGTGAATAATACTCTACAGACTACACACCGCGCAGCTTGTTCCACTGGCACGACGGCGACTCTT GTGGATGATATTGAGAGAGATGCTTGGCATAGTGTTGTGGTGCATATGCGTGTGTCTGAGGAAAGTGAAGGGGCT TATGAGGTTTGGTGGGATGGGGAGCAGGTGTATAGTGTGGAGGATATTGATGTGGGATTTGGTACTTGGGATGAT AATGATACGTTGACCACCGGGTGGTATTTTAAGAATGGGGAGTATTGTTTTGGCATCTTTCTCGTCTTCTTCACT GTTTTTGCTTTCGGCCTTGCAATAAATTGGGTCGCCTACACCTGCGCGGAAGTCATCGCAACCCTAGCCGCAATC GAAGACCCCAACTCCAACTCAACTCCCTACATCCACCTCGACAACGAAACTACCAACCCCGATGACCCCGAACTC AGCACCATCACAACCTCCAAGCCAATAACCAGCGACTTCCGCACAGCAATCAACCACCTCCGAACGCTCGGCGGC GGCGGTTTCTTCTCAACCTTCCGCGGATTCCGAATGTATCTCGCCTTCATCTGGCTAGACGCAGGCTTAGCCCTT TTAATCCCAATGTTCATCCCCGTTCCCATCCACATGGGCCTCGTCTCTTTCATGACCGACTTTATCGGCAGAATG TTCCTCGCTACGTGGCAAACGGCATGGGTTCATGTAGTCATTGCTGATAAATCCCCTATGGTCAGCTATCGACGA ATGCTGGGCTATCAGCATTGGAGAAGAATCGCTCCTGTTGCTGTTCTGCATAATGTTGTCATGTCTGTGACTTAC TCGGTGAATCTGGCTGCCTCTAGGTTTGTTGGGAGGGTTATTTGGGTCATTCTTGGTGGTGAGCATGGGAAGGGG TCGAGTGGTGGAAATGCAGAGGGAGGGATTGGCGTTGTTCTCCTGATAATGTTCTTTTTATTGCTTACTGTGCCT GTTAAGGCGATATTCACTCGTGTGGCTGCTTCGATGTTGCCTGAGGGACTTGATCCGATTTTGCCGTTTGATCGG CGGTTTGGTGGTAAGGTGATACCGGAGGGTGGGAGCGAGACTCTGAGTATCATGGAGGCGTGGACAACGTTTGAA TGGTCTGCTCGAGTTCGATATTTTAAGGTTTTTCTCAAGGCGCTTGCTCTTGAGGTCGCACTTGGTGTTCTTGGA GGTCTCTTGGTTATTGGGGAGTTGAAGTGGTTGCTTTATTCTCACTGA |
Gene | >Ani_SJS100_1|g7590.t1 ATGATCTCCATTCTCTCGCTACTATCCCTCTCTCTCTTCCACAACCTCGCCCATGCAGGCACCATCTATCACAGC AACTTCACCTCTTCCCTATCCCCCTTCTCCGCCTGCAATGTAGAATCCCCATCCTACTCCACCGCCACTGACGGA AACCTGACCGTCTACTTCGACGAGTCCTACTACGACGGTACCCGCGATCGCAAAGGCGCTGAGATATGCGTCTTT GAGGACGGCACTAGCACCAACGTGCCCCAAATGACCAAGGAAGGCTGGCAGGGCTTTTCTATCTATGTGCCGTCG GACACGTACCCGACGGACAAGAGCGCCATCATTGCGCAGCAATTCTGCCCCGGCGGGTGCTCCTCGTGGTGTGGC ACCGTCGAGATCGTGAATAATACTCTACAGACTACACACCGCGCAGCTTGTTCCACTGGCACGACGGCGACTCTT GTGGATGATATTGAGAGAGATGCTTGGCATAGTGTTGTGGTGCATATGCGTGTGTCTGAGGAAAGTGAAGGGGCT TATGAGGTTTGGTGGGATGGGGAGCAGGTGTATAGTGTGGAGGATATTGATGTGGGATTTGGTACTTGGGATGAT AATGATACGTTGACCACCGGGTGGTATTTTAAGAATGGGGAGTATTGTTTTGGTGAGTTGGTTGATGAGATGACC TAGGGTTGTGGTTACACTTGCTGACTTTTCAATTTACTCTTAGATGTCGACGCATACACTAATGAGACTAGGACG CTCTACTTTGATAACATCACTTGGTATGAGACTGATGATGGGAGTGATGATGGGTATGAGACGGTTTATCCTTGA TCAGGGCCTATCTTAAGGGAAATGCGTGTAGTAGTGCTATGTGGTTTGCGTTGGCAAAATCGACTGTGTTTGATA AAGGTGTATCAGCGAGTTGTTAATATACCGAGAAGATAATCTCCCCTTAAAAATTCGAAGCAGAATCTACTTCTG CGCGCTGTTACAGCATTGACCAAGCAAAATGCTCCATCAGGTGGGAGTGGGACCAGCGCACTGACATCGATCTTC ATACTAACTTCATACTACCACTGCGTGGCACCTGGAGTGTCTTGTCCTCTTCCGTTTTGAGACCATGTGCCCTAT GACCTCGAGTCTTGCTAGGAGCTTCTTTCTAACAGAATCCAAGATCACAACAAGTGAGACAAATGTAAATGTCCC GCACTACGGCCTTGGCGAAGCAGAATTAGGTGAGATCCCCGCACTTTTATGGTTCAAATCTGAGACATTATAGCC TGAACTTAGAGTGGCGATTTATATAAAATCAATGATTCCCTCATTTTCGCCTACTTTTGACATACAATTTTAATG TATCTCAGCCAAAAACATGTCATCTATAAGCGCTGCTCTCGTACGCCGAGGCACCGAAGTCATATCGGCTCGGCT TCAGACCAGCCAACAGCCTCTCATTAAAGAATGCATAGGCATCTTTCTCGTCTTCTTCACTGTTTTTGCTTTCGG CCTTGCAATAAATTGGGTGAGTCCATAGTGATATCAGAAAAAAACAAGTACTATACTCATCAAAGAGAACAGGTC GCCTACACCTGCGCGGAAGTCATCGCAACCCTAGCCGCAATCGAAGACCCCAACTCCAACTCAACTCCCTACATC CACCTCGACAACGAAACTACCAACCCCGATGACCCCGAACTCAGCACCATCACAACCTCCAAGCCAATAACCAGC GACTTCCGCACAGCAATCAACCACCTCCGAACGCTCGGCGGCGGCGGTTTCTTCTCAACCTTCCGCGGATTCCGA ATGTATCTCGCCTTCATCTGGCTAGACGCAGGCTTAGCCCTTTTAATCCCAATGTTCATCCCCGTTCCCATCCAC ATGGGCCTCGTCTCTTTCATGACCGACTTTATCGGCAGAATGTTCCTCGCTACGTGGCAAACGGCATGGGTTCAT GTAGTCATTGCTGATAAATCCCCTATGGTCAGCTATCGACGAATGCTGGGCTATCAGCATTGGAGAAGAATCGCT CCTGTTGCTGTTCTGCATAATGTTGTCATGTCTGTGACTTACTCGGTGAATCTGGCTGCCTCTAGGTTTGTTGGG AGGGTTATTTGGGTCATTCTTGGTGGTGAGCATGGGAAGGGGTCGAGTGGTGGAAATGCAGAGGGAGGGATTGGC GTTGTTCTCCTGATAATGTTCTTTTTATTGCTTACTGTGCCTGTTAAGGCGATATTCACTCGTGTGGCTGCTTCG ATGTTGCCTGAGGGACTTGATCCGATTTTGCCGTTTGATCGGCGGTTTGGTGGTAAGGTGATACCGGAGGGTGGG AGCGAGACTCTGAGTATCATGGAGGCGTGGACAACGTTTGAATGGTCTGCTCGAGTTCGATATTTTAAGGTTTTT CTCAAGGCGCTTGCTCTTGAGGTCGCACTTGGTGTTCTTGGAGGTCTCTTGGTTATTGGGGAGTTGAAGTGGTTG CTTTATTCTCACTGA |