© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g7574.t1 |
| Gene name | |
| Location | scaffold_054:24656..26313 |
| Strand | - |
| Gene length (bp) | 1657 |
| Transcript length (bp) | 1497 |
| Coding sequence length (bp) | 1497 |
| Protein length (aa) | 499 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02417 | Chromate_transp | Chromate transporter | 1.4E-28 | 22 | 185 |
| PF02417 | Chromate_transp | Chromate transporter | 5.0E-36 | 307 | 487 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0015109 | chromate transmembrane transporter activity | Yes |
| GO:0015703 | chromate transport | Yes |
| GO:0015698 | inorganic anion transport | No |
| GO:0008509 | anion transmembrane transporter activity | No |
| GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0006820 | anion transport | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0005215 | transporter activity | No |
| GO:0006811 | ion transport | No |
| GO:0006810 | transport | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0015103 | inorganic anion transmembrane transporter activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 14 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 87 | 109 | 22 |
| 2 | 124 | 146 | 22 |
| 3 | 159 | 181 | 22 |
| 4 | 274 | 296 | 22 |
| 5 | 309 | 331 | 22 |
| 6 | 346 | 368 | 22 |
| 7 | 380 | 402 | 22 |
| 8 | 417 | 439 | 22 |
| 9 | 472 | 494 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g7574.t1 MPAQPTRHAQKSPLLERLGEVVRHTWYLGFTSFGGPPVHFQIFHARFVEQEKWVDEQTYQELFAICQGLPGPGST KMLFCLTLLHAGFIPAILAFVLWCLPGAVGMYALSLGVQRIDETLPAAVYALLSGLNASTVGIVALAAVQLAEKA IRDKIARILVIFGACAGLCYSALWYFPVLMVAGGVTTALWDGWIYQQILRAKMAWKNRNRQPEPEGDEPGSAGRE SSSMQSPEQGARTEMLRMRKSGAEASSPNSTNIQAPEGGEAAPAWEHIIRIRVGAAILIFFFASFIAILVTRAKL SAPPLSLELFANMYLAGTVIFGGGPVVIPLLRSYVVDPGWVSSRDFLIGLAIIQAFPGPNFNFAVFLGALAVRTT SYPTVFGAFLCGLGIFFPGITLAVAIQSFWRVLRKQKYIVDFLRGVNASAVGLVFTAVYRLWEIGYLTPQDRDGQ SLAKEPWWVVIAAVTYAQSAWFKVPPAVAIVLGAVLGLCWYEVVSPAW* |
| Coding | >Ani_SJS100_1|g7574.t1 ATGCCGGCGCAACCGACCCGGCACGCGCAGAAGAGCCCCCTTCTTGAACGCTTGGGCGAGGTCGTGCGACATACC TGGTATCTGGGATTTACGTCTTTTGGGGGTCCGCCGGTTCATTTCCAGATTTTTCACGCGCGGTTTGTCGAGCAG GAAAAGTGGGTTGATGAGCAGACGTACCAAGAACTTTTCGCTATCTGTCAGGGCCTGCCGGGACCGGGTTCGACC AAGATGCTATTCTGCTTGACGTTGCTTCACGCTGGTTTCATCCCGGCCATACTGGCATTTGTCCTATGGTGTCTT CCCGGCGCAGTCGGTATGTATGCCCTCTCTCTCGGCGTGCAACGGATCGACGAAACACTGCCCGCGGCAGTCTAC GCTCTTCTCTCCGGTCTAAATGCCTCGACAGTAGGCATTGTTGCCCTCGCTGCCGTCCAGCTAGCTGAAAAGGCG ATCCGTGATAAGATTGCCCGCATCCTGGTTATTTTCGGTGCATGCGCAGGCCTCTGCTATAGCGCGCTCTGGTAT TTCCCAGTTCTTATGGTTGCGGGCGGTGTTACTACGGCACTGTGGGATGGTTGGATATATCAACAAATTCTCAGG GCAAAGATGGCTTGGAAAAATAGGAATCGGCAGCCCGAACCGGAGGGTGACGAGCCTGGATCGGCAGGCCGCGAG AGTTCGTCCATGCAAAGCCCAGAACAGGGTGCTAGAACAGAGATGCTACGGATGAGGAAGTCAGGTGCAGAGGCA TCCTCCCCGAACTCAACCAATATCCAGGCCCCGGAAGGAGGGGAAGCCGCACCTGCATGGGAGCATATCATTCGG ATCCGTGTAGGGGCTGCAATTCTTATCTTCTTCTTTGCGTCCTTCATCGCCATTCTTGTCACAAGAGCCAAACTC TCCGCACCGCCTCTATCTCTCGAACTCTTCGCGAATATGTACTTAGCTGGCACTGTGATCTTCGGCGGCGGCCCC GTCGTTATCCCCTTGCTCCGGTCATACGTCGTAGACCCGGGTTGGGTTTCCAGTCGAGACTTCCTCATCGGCCTT GCAATCATTCAGGCCTTCCCCGGCCCAAACTTCAACTTTGCAGTCTTTCTCGGTGCTCTTGCCGTCCGAACAACA TCCTACCCGACAGTCTTCGGTGCCTTCCTCTGTGGGCTAGGGATCTTCTTTCCTGGAATTACCCTCGCCGTCGCA ATCCAGTCCTTTTGGCGTGTTCTGCGGAAACAGAAGTATATTGTTGACTTCCTCCGAGGCGTGAATGCATCAGCT GTTGGATTAGTGTTTACAGCTGTGTACCGGCTTTGGGAAATCGGATATCTAACTCCACAGGATCGTGATGGGCAG AGTCTGGCGAAGGAGCCCTGGTGGGTTGTTATTGCCGCTGTTACATATGCCCAGAGTGCATGGTTCAAGGTCCCG CCTGCGGTTGCAATTGTGCTAGGTGCTGTGCTTGGGTTGTGTTGGTATGAAGTCGTTAGTCCTGCCTGGTGA |
| Transcript | >Ani_SJS100_1|g7574.t1 ATGCCGGCGCAACCGACCCGGCACGCGCAGAAGAGCCCCCTTCTTGAACGCTTGGGCGAGGTCGTGCGACATACC TGGTATCTGGGATTTACGTCTTTTGGGGGTCCGCCGGTTCATTTCCAGATTTTTCACGCGCGGTTTGTCGAGCAG GAAAAGTGGGTTGATGAGCAGACGTACCAAGAACTTTTCGCTATCTGTCAGGGCCTGCCGGGACCGGGTTCGACC AAGATGCTATTCTGCTTGACGTTGCTTCACGCTGGTTTCATCCCGGCCATACTGGCATTTGTCCTATGGTGTCTT CCCGGCGCAGTCGGTATGTATGCCCTCTCTCTCGGCGTGCAACGGATCGACGAAACACTGCCCGCGGCAGTCTAC GCTCTTCTCTCCGGTCTAAATGCCTCGACAGTAGGCATTGTTGCCCTCGCTGCCGTCCAGCTAGCTGAAAAGGCG ATCCGTGATAAGATTGCCCGCATCCTGGTTATTTTCGGTGCATGCGCAGGCCTCTGCTATAGCGCGCTCTGGTAT TTCCCAGTTCTTATGGTTGCGGGCGGTGTTACTACGGCACTGTGGGATGGTTGGATATATCAACAAATTCTCAGG GCAAAGATGGCTTGGAAAAATAGGAATCGGCAGCCCGAACCGGAGGGTGACGAGCCTGGATCGGCAGGCCGCGAG AGTTCGTCCATGCAAAGCCCAGAACAGGGTGCTAGAACAGAGATGCTACGGATGAGGAAGTCAGGTGCAGAGGCA TCCTCCCCGAACTCAACCAATATCCAGGCCCCGGAAGGAGGGGAAGCCGCACCTGCATGGGAGCATATCATTCGG ATCCGTGTAGGGGCTGCAATTCTTATCTTCTTCTTTGCGTCCTTCATCGCCATTCTTGTCACAAGAGCCAAACTC TCCGCACCGCCTCTATCTCTCGAACTCTTCGCGAATATGTACTTAGCTGGCACTGTGATCTTCGGCGGCGGCCCC GTCGTTATCCCCTTGCTCCGGTCATACGTCGTAGACCCGGGTTGGGTTTCCAGTCGAGACTTCCTCATCGGCCTT GCAATCATTCAGGCCTTCCCCGGCCCAAACTTCAACTTTGCAGTCTTTCTCGGTGCTCTTGCCGTCCGAACAACA TCCTACCCGACAGTCTTCGGTGCCTTCCTCTGTGGGCTAGGGATCTTCTTTCCTGGAATTACCCTCGCCGTCGCA ATCCAGTCCTTTTGGCGTGTTCTGCGGAAACAGAAGTATATTGTTGACTTCCTCCGAGGCGTGAATGCATCAGCT GTTGGATTAGTGTTTACAGCTGTGTACCGGCTTTGGGAAATCGGATATCTAACTCCACAGGATCGTGATGGGCAG AGTCTGGCGAAGGAGCCCTGGTGGGTTGTTATTGCCGCTGTTACATATGCCCAGAGTGCATGGTTCAAGGTCCCG CCTGCGGTTGCAATTGTGCTAGGTGCTGTGCTTGGGTTGTGTTGGTATGAAGTCGTTAGTCCTGCCTGGTGA |
| Gene | >Ani_SJS100_1|g7574.t1 ATGCCGGCGCAACCGACCCGGCACGCGCAGAAGAGCCCCCTTCTTGAACGCTTGGGCGAGGTCGTGCGACATACC TGGTATCTGGGATTTACGTCTTTTGGGGGTCCGCCGGTTCATTTCCAGATTTTTCACGCGCGGTTTGTCGAGCAG GAAAAGTGGGTTGATGAGCAGACGGTAGGGATGCATGAATAACGTCCAGGATCGTCAGGCGCTAACAGGTAAAAG TACCAAGAACTTTTCGCTATCTGTCAGGGCCTGCCGGGACCGGGTTCGACCAAGATGCTATTCTGCTTGACGTTG CTTCACGCTGGTTTCATCCCGGCCATACTGGCATTTGTCCTATGGTGGTATGTCTACTGCTTTAATTGCGGAATG ATGGGCTGATCAGATTTACTAGTCTTCCCGGCGCAGTCGGTATGTATGCCCTCTCTCTCGGCGTGCAACGGATCG ACGAAACACTGCCCGCGGCAGTCTACGCTCTTCTCTCCGGTCTAAATGCCTCGACAGTAGGCATTGTTGCCCTCG CTGCCGTCCAGCTAGCTGAAAAGGCGATCCGTGATAAGATTGCCCGCATCCTGGTTATTTTCGGTGCATGCGCAG GCCTCTGCTATAGCGCGCTCTGGTATTTCCCAGTTCTTATGGTTGCGGGCGGTGTTACTACGGCACTGTGGGATG GTTGGATATATCAACAAATTCTCAGGGCAAAGATGGCTTGGAAAAATAGGAATCGGCAGCCCGAACCGGAGGGTG ACGAGCCTGGATCGGCAGGCCGCGAGAGTTCGTCCATGCAAAGCCCAGAACAGGGTGCTAGAACAGAGATGCTAC GGATGAGGAAGTCAGGTGCAGAGGCATCCTCCCCGAACTCAACCAATATCCAGGCCCCGGAAGGAGGGGAAGCCG CACCTGCATGGGAGCATATCATTCGGATCCGTGTAGGGGCTGCAATTCTTATCTTCTTCTTTGGTAAGCTTCCGT GTGAGAATTTGCATTATCGCTGAATGAAGGCTGACCCCGAACCATAGCGTCCTTCATCGCCATTCTTGTCACAAG AGCCAAACTCTCCGCACCGCCTCTATCTCTCGAACTCTTCGCGAATATGTACTTAGCTGGCACTGTGATCTTCGG CGGCGGCCCCGTCGTTATCCCCTTGCTCCGGTCATACGTCGTAGACCCGGGTTGGGTTTCCAGTCGAGACTTCCT CATCGGCCTTGCAATCATTCAGGCCTTCCCCGGCCCAAACTTCAACTTTGCAGTCTTTCTCGGTGCTCTTGCCGT CCGAACAACATCCTACCCGACAGTCTTCGGTGCCTTCCTCTGTGGGCTAGGGATCTTCTTTCCTGGAATTACCCT CGCCGTCGCAATCCAGTCCTTTTGGCGTGTTCTGCGGAAACAGAAGTATATTGTTGACTTCCTCCGAGGCGTGAA TGCATCAGCTGTTGGATTAGTGTTTACAGCTGTGTACCGGCTTTGGGAAATCGGATATCTAACTCCACAGGATCG TGATGGGCAGAGTCTGGCGAAGGAGCCCTGGTGGGTTGTTATTGCCGCTGTTACATATGCCCAGAGTGCATGGTT CAAGGTCCCGCCTGCGGTTGCAATTGTGCTAGGTGCTGTGCTTGGGTTGTGTTGGTATGAAGTCGTTAGTCCTGC CTGGTGA |