Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g7556.t1
Gene name
Locationscaffold_053:218490..219376
Strand+
Gene length (bp)886
Transcript length (bp)675
Coding sequence length (bp)675
Protein length (aa) 225

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g7556.t1
MKFTGIAASLALAGTVSAAAIPVVDTTVQSTLSQLTGVLGKVDNVVGGLVGCASTDLTGLKDELSTIEGKLTQLL
PSNKRDLTGTVGGVATPVVGIAGDAAGTVGGVTGGAVNTVGHVVDGAVNTVEGVASPVVKTAGAAVNSVASPVVN
VAGGAVGTVKGAASGVVSADVNLKRDITDLSGLSETLVAKIQSGDLTAGALENILGLLSQNGGLANLQSVLSLL*
Coding >Ani_SJS100_1|g7556.t1
ATGAAGTTCACTGGAATTGCTGCTTCTCTTGCCCTCGCTGGCACTGTCTCTGCCGCTGCTATCCCAGTTGTAGAT
ACTACCGTTCAGTCTACGCTTAGCCAGCTGACTGGCGTTCTCGGGAAAGTCGACAATGTTGTCGGTGGTCTTGTT
GGCTGCGCTAGCACCGACCTCACTGGTCTGAAAGACGAACTTTCCACCATTGAAGGCAAGCTGACCCAGCTGCTT
CCCTCCAACAAGCGTGACCTTACTGGCACTGTCGGTGGCGTTGCTACACCTGTGGTCGGAATCGCCGGTGATGCC
GCTGGCACCGTTGGGGGTGTTACCGGCGGTGCTGTTAACACTGTTGGACACGTCGTTGATGGAGCCGTCAACACC
GTCGAAGGTGTTGCTTCGCCCGTTGTCAAGACAGCTGGTGCTGCTGTCAACTCTGTCGCCTCCCCTGTCGTCAAC
GTGGCTGGCGGAGCCGTCGGCACTGTCAAGGGAGCAGCCAGCGGCGTTGTCTCTGCTGACGTCAACCTGAAGCGC
GACATCACCGACCTTTCTGGTCTTTCCGAGACTCTTGTCGCCAAGATCCAGAGCGGTGACCTGACCGCCGGCGCC
CTTGAGAACATCCTGGGCCTCCTCAGCCAGAACGGTGGTCTCGCCAACCTTCAGTCTGTCCTTTCCCTTCTGTAA
Transcript >Ani_SJS100_1|g7556.t1
ATGAAGTTCACTGGAATTGCTGCTTCTCTTGCCCTCGCTGGCACTGTCTCTGCCGCTGCTATCCCAGTTGTAGAT
ACTACCGTTCAGTCTACGCTTAGCCAGCTGACTGGCGTTCTCGGGAAAGTCGACAATGTTGTCGGTGGTCTTGTT
GGCTGCGCTAGCACCGACCTCACTGGTCTGAAAGACGAACTTTCCACCATTGAAGGCAAGCTGACCCAGCTGCTT
CCCTCCAACAAGCGTGACCTTACTGGCACTGTCGGTGGCGTTGCTACACCTGTGGTCGGAATCGCCGGTGATGCC
GCTGGCACCGTTGGGGGTGTTACCGGCGGTGCTGTTAACACTGTTGGACACGTCGTTGATGGAGCCGTCAACACC
GTCGAAGGTGTTGCTTCGCCCGTTGTCAAGACAGCTGGTGCTGCTGTCAACTCTGTCGCCTCCCCTGTCGTCAAC
GTGGCTGGCGGAGCCGTCGGCACTGTCAAGGGAGCAGCCAGCGGCGTTGTCTCTGCTGACGTCAACCTGAAGCGC
GACATCACCGACCTTTCTGGTCTTTCCGAGACTCTTGTCGCCAAGATCCAGAGCGGTGACCTGACCGCCGGCGCC
CTTGAGAACATCCTGGGCCTCCTCAGCCAGAACGGTGGTCTCGCCAACCTTCAGTCTGTCCTTTCCCTTCTGTAA
Gene >Ani_SJS100_1|g7556.t1
ATGAAGTTCACTGGAATTGCTGCTTCTCTTGCCCTCGCTGGCACTGTCTCTGCCGCTGCTATCCCAGTTGTAGAT
ACTACCGTTCAGTCTACGCTTAGCCAGCTGACTGGCGTTCTCGGGAAAGTCGACAATGTTGTCGGTGGTCTTGTT
GGCTGCGCTAGCACCGACCTCACTGGTCTGAAAGACGGTATGCTACCTATGACCGTGAACCTCTGCTAGGGAGAC
CCACTGATATAAAGATATGTAGAACTTTCCACCATTGAAGGCAAGCTGACCCAGCTGCTTCCCTCCAACAAGCGT
GACCTTACTGGCACTGTCGGTGGCGTTGCTACACCTGTGGTCGGAATCGCCGGTGATGCCGCTGGCACCGTTGGG
GGTGTTACCGGCGGTGCTGTTAACACTGTTGGACACGTCGTTGATGGAGCCGTCAACACCGTCGAAGGTGTTGCT
TCGCCCGTTGTCAAGACAGCTGGTGCTGCTGTCAACTCTGTCGCCTCCCCTGTCGTCAACGTGGCTGGCGGAGCC
GTCGGCACTGTCAAGGGAGCAGCCAGCGGCGTTGTCTCTGCTGGTATGTATAGATACCTAGATTCATGTACAATA
ACTAACGGTATACCAGACGTCAACCTGAAGCGCGACATCACCGACCTTTCTGGTCTTTCCGAGACTCTTGTCGCC
AAGATCCAGAGCGGTAAGTGACATTCTGAGCATGAATAGTAAAGTAAGCTTACTGACCCTTCCAAGGTGACCTGA
CCGCCGGCGCCCTTGAGAACATCCTGGGCCTCCTCAGCCAGAACGGTGAGTTGATCCGAAAAGGTTTGAAGAGAA
CATCGCTGACAATAGCCTAGGTGGTCTCGCCAACCTTCAGTCTGTCCTTTCCCTTCTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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