Protein ID | Ani_SJS100_1|g7544.t1 |
Gene name | |
Location | scaffold_053:191331..193283 |
Strand | - |
Gene length (bp) | 1952 |
Transcript length (bp) | 1662 |
Coding sequence length (bp) | 1662 |
Protein length (aa) | 554 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01545 | Cation_efflux | Cation efflux family | 1.7E-23 | 267 | 455 |
PF16916 | ZT_dimer | Dimerisation domain of Zinc Transporter | 4.2E-07 | 479 | 538 |
GO Term | Description | Terminal node |
---|---|---|
GO:0055085 | transmembrane transport | Yes |
GO:0006812 | cation transport | Yes |
GO:0016021 | integral component of membrane | Yes |
GO:0008324 | cation transmembrane transporter activity | Yes |
GO:0051179 | localization | No |
GO:0003674 | molecular_function | No |
GO:0022857 | transmembrane transporter activity | No |
GO:0006810 | transport | No |
GO:0006811 | ion transport | No |
GO:0005215 | transporter activity | No |
GO:0009987 | cellular process | No |
GO:0015075 | ion transmembrane transporter activity | No |
GO:0110165 | cellular anatomical entity | No |
GO:0051234 | establishment of localization | No |
GO:0031224 | intrinsic component of membrane | No |
GO:0005575 | cellular_component | No |
GO:0008150 | biological_process | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 264 | 286 | 22 |
2 | 290 | 312 | 22 |
3 | 333 | 355 | 22 |
4 | 370 | 389 | 19 |
5 | 409 | 431 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g7544.t1 MFEPARPRLRLKNAVRVPPSLTRSTKSSLPPSQNASSSINTVPPMLTSSPRSDSFIRARQPSLDLEHDLLSTRGQ RLGGLIRRRSLSVQSADNPYDSERLEDSIQDRGDRPVAFERARRLIGESRPIYRWQHFYQDPTTLKKMPKAMREY YERNNDLISQYVFIDRLLDSSLPHRLIVDYHSNQPGEPPVSTNGRAYDATSYGTGDTKASGKIKRTPRNLYRIPS ENETSPLLPPMIEERVASPPDIIPTNDEFVDSSDRIVTVAIYVNFIANVLLLVAKIIAMTMTNSLSVLASLVDGA LDFLSTAIVWITTTLIRRQDRSRYPISRRRLEPLSVLVFAVVMVTSFVQVALTSFTRLISSDRSVVDLSLPSIAV MASTVIVKLICWFWCRLIKNSSVQALAQDAMTDVIFNLFSILFPLIGSLTTTWYIDPLGGLLLSLYIIYNWSATA SEHIGHLTGAAASPKDHSILLYMTMRFSKAILKIQDLKAYYAGDRLNVEVDIVLDPKTRLQDSHDVGESLQYMVE SVPTVDRAFVHIDYDPWNIPSHMNQIEG* |
Coding | >Ani_SJS100_1|g7544.t1 ATGTTTGAGCCCGCGCGCCCCAGACTCCGATTGAAGAATGCCGTCAGGGTCCCACCAAGCTTGACTCGGTCGACC AAGTCATCGCTGCCGCCTAGTCAGAATGCTTCTTCATCCATTAATACTGTGCCACCAATGCTTACCTCTTCGCCG CGATCGGATTCATTCATCCGGGCGAGACAACCAAGTCTTGACTTAGAACACGATCTTCTCTCCACCCGTGGCCAA CGCCTCGGGGGACTAATACGACGGCGCTCTCTCAGCGTCCAAAGCGCCGATAATCCTTATGACAGTGAAAGGCTT GAAGATTCCATTCAAGATCGCGGGGATAGGCCTGTTGCTTTTGAGCGCGCTAGGCGACTCATCGGCGAGAGCAGG CCTATTTATCGTTGGCAACATTTCTATCAGGACCCTACTACGCTGAAGAAAATGCCAAAGGCCATGCGCGAGTAT TACGAGCGCAACAACGATCTGATATCGCAATATGTCTTTATTGACAGATTGCTGGACTCCTCTCTCCCCCATCGT CTGATTGTGGACTATCACAGCAACCAGCCAGGAGAGCCCCCAGTCTCAACCAACGGCCGGGCATATGACGCAACC TCCTACGGCACAGGAGATACCAAAGCATCCGGTAAAATCAAGAGAACTCCCCGAAATCTCTATCGCATTCCCAGC GAGAACGAGACATCTCCACTCCTGCCCCCGATGATCGAAGAACGAGTAGCATCACCCCCAGACATCATCCCCACA AACGATGAGTTCGTCGACAGCAGCGACCGTATAGTCACTGTAGCAATATACGTCAACTTCATCGCCAACGTCCTC CTCCTAGTCGCAAAGATTATTGCTATGACCATGACAAACTCTCTATCCGTCCTGGCCAGCTTAGTCGACGGGGCA CTGGACTTCCTCAGCACAGCCATAGTCTGGATCACAACCACCTTGATCCGTCGACAAGACCGCTCCCGATACCCG ATCAGCCGTCGCCGACTCGAACCACTCAGCGTATTAGTCTTCGCCGTCGTAATGGTGACATCTTTCGTCCAAGTC GCACTCACATCCTTCACACGCCTCATTTCTTCCGACCGCTCCGTCGTCGATCTATCCCTCCCTTCCATCGCTGTC ATGGCCAGCACAGTTATCGTCAAGCTCATCTGCTGGTTCTGGTGTCGACTGATTAAGAACTCGAGCGTCCAAGCA CTAGCACAAGACGCCATGACGGACGTAATCTTCAACTTGTTCAGTATTCTCTTCCCTCTCATCGGCTCCCTGACC ACAACCTGGTACATCGACCCGTTAGGCGGTCTTCTCCTGTCCCTGTACATAATCTACAACTGGAGCGCCACAGCC AGCGAACACATCGGCCATCTAACAGGCGCCGCAGCATCACCCAAAGACCACAGTATTCTGCTGTACATGACGATG CGGTTCTCGAAAGCAATTCTCAAGATCCAAGATCTAAAGGCCTATTACGCAGGAGATCGGCTCAACGTCGAGGTG GATATTGTCCTGGACCCGAAGACCAGACTCCAAGATAGTCATGATGTTGGGGAGAGTCTGCAGTATATGGTGGAG AGTGTGCCTACGGTGGATAGGGCATTCGTGCATATTGATTACGATCCGTGGAATATTCCGAGTCATATGAACCAG ATTGAGGGGTGA |
Transcript | >Ani_SJS100_1|g7544.t1 ATGTTTGAGCCCGCGCGCCCCAGACTCCGATTGAAGAATGCCGTCAGGGTCCCACCAAGCTTGACTCGGTCGACC AAGTCATCGCTGCCGCCTAGTCAGAATGCTTCTTCATCCATTAATACTGTGCCACCAATGCTTACCTCTTCGCCG CGATCGGATTCATTCATCCGGGCGAGACAACCAAGTCTTGACTTAGAACACGATCTTCTCTCCACCCGTGGCCAA CGCCTCGGGGGACTAATACGACGGCGCTCTCTCAGCGTCCAAAGCGCCGATAATCCTTATGACAGTGAAAGGCTT GAAGATTCCATTCAAGATCGCGGGGATAGGCCTGTTGCTTTTGAGCGCGCTAGGCGACTCATCGGCGAGAGCAGG CCTATTTATCGTTGGCAACATTTCTATCAGGACCCTACTACGCTGAAGAAAATGCCAAAGGCCATGCGCGAGTAT TACGAGCGCAACAACGATCTGATATCGCAATATGTCTTTATTGACAGATTGCTGGACTCCTCTCTCCCCCATCGT CTGATTGTGGACTATCACAGCAACCAGCCAGGAGAGCCCCCAGTCTCAACCAACGGCCGGGCATATGACGCAACC TCCTACGGCACAGGAGATACCAAAGCATCCGGTAAAATCAAGAGAACTCCCCGAAATCTCTATCGCATTCCCAGC GAGAACGAGACATCTCCACTCCTGCCCCCGATGATCGAAGAACGAGTAGCATCACCCCCAGACATCATCCCCACA AACGATGAGTTCGTCGACAGCAGCGACCGTATAGTCACTGTAGCAATATACGTCAACTTCATCGCCAACGTCCTC CTCCTAGTCGCAAAGATTATTGCTATGACCATGACAAACTCTCTATCCGTCCTGGCCAGCTTAGTCGACGGGGCA CTGGACTTCCTCAGCACAGCCATAGTCTGGATCACAACCACCTTGATCCGTCGACAAGACCGCTCCCGATACCCG ATCAGCCGTCGCCGACTCGAACCACTCAGCGTATTAGTCTTCGCCGTCGTAATGGTGACATCTTTCGTCCAAGTC GCACTCACATCCTTCACACGCCTCATTTCTTCCGACCGCTCCGTCGTCGATCTATCCCTCCCTTCCATCGCTGTC ATGGCCAGCACAGTTATCGTCAAGCTCATCTGCTGGTTCTGGTGTCGACTGATTAAGAACTCGAGCGTCCAAGCA CTAGCACAAGACGCCATGACGGACGTAATCTTCAACTTGTTCAGTATTCTCTTCCCTCTCATCGGCTCCCTGACC ACAACCTGGTACATCGACCCGTTAGGCGGTCTTCTCCTGTCCCTGTACATAATCTACAACTGGAGCGCCACAGCC AGCGAACACATCGGCCATCTAACAGGCGCCGCAGCATCACCCAAAGACCACAGTATTCTGCTGTACATGACGATG CGGTTCTCGAAAGCAATTCTCAAGATCCAAGATCTAAAGGCCTATTACGCAGGAGATCGGCTCAACGTCGAGGTG GATATTGTCCTGGACCCGAAGACCAGACTCCAAGATAGTCATGATGTTGGGGAGAGTCTGCAGTATATGGTGGAG AGTGTGCCTACGGTGGATAGGGCATTCGTGCATATTGATTACGATCCGTGGAATATTCCGAGTCATATGAACCAG ATTGAGGGGTGA |
Gene | >Ani_SJS100_1|g7544.t1 ATGTTTGAGGTGAGAAAGTTCTGTCGGACTCCATCTCATAATGGTGAGCTAACAGCTCGGCCCAGCCCGCGCGCC CCAGACTCCGATTGAAGAATGCCGTCAGGGTCCCACCAAGCTTGACTCGGTCGACCAAGTCATCGCTGCCGCCTA GTCAGAATGCTTCTTCATCCATTAAGTTTATACGCCATTCAATGCAAGGGAAGGGAAGATGTCCTCGACACCTCG GTCTAGTACTGTGCCACCAATGCTTACCTCTTCGCCGCGATCGGATTCATTCATCCGGGCGAGACAACCAAGTCT TGACTTAGAACACGATCTTCTCTCCACCCGTGGCCAACGCCTCGGGGGACTAATACGACGGCGCTCTCTCAGCGT CCAAAGCGCCGATAATCCTTATGACAGTGAAAGGCTTGAAGATTCCATTCAAGATCGCGGGGATAGGCCTGTTGC TTTTGAGCGCGCTAGGCGACTCATCGGCGAGAGCAGGCCTATTTATCGTTGGTATGCCATTTCCCCTCGTTTCAC AGCTTAGTTAATATGTACTAAAGGGGAAATGCAGGCAACATTTCTATCAGGACCCTACTACGCTGAAGAAAATGC CAAAGGCCATGTACGTCCCCGTCTATGGCTCCAACGCTGTGCGATCTGACACGGCAACAGGCGCGAGTATTACGA GCGCAACAACGATCTGATATCGCAATATGTCTTTATTGACAGATTGCTGGACTCCTCTCTCCCCCATCGTCTGAT TGTGGACTATCACAGCAACCAGCCAGGAGAGCCCCCAGTCTCAACCAACGGCCGGGCATATGACGCAACCTCCTA CGGCACAGGAGATACCAAAGCATCCGGTAAAATCAAGAGAACTCCCCGAAATCTCTATCGCATTCCCAGCGAGAA CGAGACATCTCCACTCCTGCCCCCGATGATCGAAGAACGAGTAGCATCACCCCCAGACATCATCCCCACAAACGA TGAGTTCGTCGACAGCAGCGACCGTATAGTCACTGTAGCAATATACGTCAACTTCATCGCCAACGTCCTCCTCCT AGTCGCAAAGATTATTGCTATGACCATGACAAACTCTCTATCCGTCCTGGCCAGCTTAGTCGACGGGGCACTGGA CTTCCTCAGCACAGCCATAGTCTGGATCACAACCACCTTGATCCGTCGACAAGACCGCTCCCGATACCCGATCAG CCGTCGCCGACTCGAACCACTCAGCGTATTAGTCTTCGCCGTCGTAATGGTGACATCTTTCGTCCAAGTCGCACT CACATCCTTCACACGCCTCATTTCTTCCGACCGCTCCGTCGTCGATCTATCCCTCCCTTCCATCGCTGTCATGGC CAGCACAGTTATCGTCAAGCTCATCTGCTGGTTCTGGTGTCGACTGATTAAGAACTCGAGCGTCCAAGCACTAGC ACAAGACGCCATGACGGACGTAATCTTCAACTTGTTCAGTATTCTCTTCCCTCTCAGTAAGTTCTTCCTGCCCTC ACCCTAACTTCTCTCAACCCAAACCACACCACTAACCAATACAACAAAAAGTCGGCTCCCTGACCACAACCTGGT ACATCGACCCGTTAGGCGGTCTTCTCCTGTCCCTGTACATAATCTACAACTGGAGCGCCACAGCCAGCGAACACA TCGGCCATCTAACAGGCGCCGCAGCATCACCCAAAGACCACAGTATTCTGCTGTACATGACGATGCGGTTCTCGA AAGCAATTCTCAAGATCCAAGATCTAAAGGCCTATTACGCAGGAGATCGGCTCAACGTCGAGGTGGATATTGTCC TGGACCCGAAGACCAGACTCCAAGATAGTCATGATGTTGGGGAGAGTCTGCAGTATATGGTGGAGAGTGTGCCTA CGGTGGATAGGGCATTCGTGCATATTGATTACGATCCGTGGAATATTCCGAGTCATATGAACCAGATTGAGGGGT GA |