Protein ID | Ani_SJS100_1|g7543.t1 |
Gene name | |
Location | scaffold_053:188462..190349 |
Strand | - |
Gene length (bp) | 1887 |
Transcript length (bp) | 1734 |
Coding sequence length (bp) | 1734 |
Protein length (aa) | 578 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00046 | Homeodomain | Homeodomain | 1.7E-14 | 54 | 110 |
GO Term | Description | Terminal node |
---|---|---|
GO:0003677 | DNA binding | Yes |
GO:0003676 | nucleic acid binding | No |
GO:0005488 | binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 41 | 0.45 |
Transcription Factor Class (based on PFAM domains) |
---|
Homeodomain |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g7543.t1 MSDPEPSSAPCSSSPPSTQASDSTAALNYAFLVHSQKTLTQNLPPRVDNKLLARQKRRRTSPEDHAILEAEYQRN PKPDKTARASIVSRVSLGEKEVQIWFQNRRQNDRRKSKPLQPHELLAPRSDVSDASKRVADDNLPTKPGSSSGTE QSEGNCQDRNVATQSPDHASFESDVVHGDNNELEQSGLSSQTSLATEAVEDSQRASDETMPEQQPPPVHDETHLD DSNPASVKRKRSFSETRGNRPFMQGTSTPMKSPPSLRISLSFDGEAMVRKEDELTPSPPKGRNALRIAMSSDGKA VIRADGEPSPSKNRISMFSARKPRLAGLRRSNSAAAFSTPRGGSMETEKLFGRSRDPRNWESFFDTDARSALSTP TSSQSAPNAGSPALFRARGQRSLTRSMSARHSNAFNSSEYLNTPVPKPTGDKRRKISRTVSSLGRLETGRATLGD KLSNSKTISTKDDDLELQWGDSDKENWIPGTRVSHVRRRTTSHHHSRRSILREANSRDAKANRDLASGGRYSRVS HPHQRVSGVIDKDVPEMDAEVSAFMNGGGGASQEEDLDCIQGLLSLSQGAWR* |
Coding | >Ani_SJS100_1|g7543.t1 ATGTCTGATCCGGAGCCCTCTTCTGCACCATGCTCCTCCTCGCCGCCCTCAACCCAGGCGTCTGACTCTACTGCT GCCCTCAATTACGCCTTCCTAGTACACTCCCAAAAGACCTTAACTCAGAACCTTCCTCCACGCGTCGACAATAAA TTGCTGGCACGGCAAAAGCGGCGTCGGACTAGCCCCGAAGACCACGCAATCCTTGAAGCCGAGTATCAACGGAAC CCGAAGCCAGACAAAACGGCCCGAGCCAGTATAGTCAGTCGCGTCTCGTTGGGCGAGAAGGAAGTGCAAATCTGG TTCCAAAATCGTCGTCAAAATGATCGCCGGAAATCGAAACCATTGCAACCTCATGAGCTTCTCGCGCCTCGGTCG GACGTGTCCGACGCGTCAAAACGGGTAGCCGATGACAACCTTCCGACGAAGCCAGGATCTTCGAGCGGGACAGAG CAATCAGAGGGCAACTGCCAGGACAGGAACGTTGCTACACAATCACCCGACCATGCGTCTTTTGAATCGGACGTG GTGCATGGAGACAATAATGAGCTGGAGCAGTCAGGGTTAAGCTCTCAAACCAGCCTGGCTACTGAAGCTGTGGAG GATTCGCAGAGAGCTTCAGACGAGACGATGCCGGAACAACAACCGCCCCCGGTGCACGATGAAACTCATCTCGAT GATTCCAACCCAGCTTCTGTTAAGAGGAAACGATCATTTTCTGAGACCCGTGGCAATCGGCCGTTTATGCAGGGA ACATCAACACCTATGAAGTCTCCTCCATCCTTGCGGATATCGCTCTCGTTTGACGGAGAAGCTATGGTACGCAAA GAAGACGAGCTCACGCCATCTCCTCCGAAAGGACGAAATGCCCTGCGGATCGCCATGTCCTCTGATGGAAAAGCC GTGATCCGTGCTGATGGCGAGCCGTCTCCGTCAAAGAACCGCATTTCTATGTTCTCAGCGCGTAAGCCCAGGCTT GCAGGGCTTCGAAGGAGCAACAGTGCCGCGGCATTTAGTACGCCACGTGGTGGTTCCATGGAGACTGAAAAGTTG TTTGGAAGATCAAGAGATCCTCGCAACTGGGAATCGTTCTTTGACACCGATGCAAGAAGTGCACTTTCTACTCCG ACCAGCTCCCAAAGCGCACCGAACGCTGGCTCTCCCGCTTTGTTCCGCGCACGTGGTCAGCGTTCACTAACGAGG AGCATGTCGGCAAGGCATAGCAATGCCTTCAATTCTTCGGAATATCTTAATACCCCTGTTCCTAAGCCGACTGGC GACAAAAGACGGAAGATCTCCCGCACGGTCTCCTCATTGGGCCGGCTGGAGACAGGCCGTGCGACCCTTGGTGAT AAACTGTCTAACTCGAAGACGATATCGACAAAAGACGATGACCTGGAGTTACAGTGGGGTGACTCTGATAAGGAG AACTGGATACCAGGCACACGAGTCTCCCATGTTCGCCGGCGGACCACTTCGCATCATCACTCGCGGCGTTCAATA CTTAGAGAGGCCAACAGCAGGGATGCCAAAGCCAACAGGGATCTGGCATCAGGCGGAAGATACTCACGGGTGTCC CACCCGCACCAACGAGTGAGCGGGGTAATCGACAAGGATGTGCCTGAGATGGACGCCGAGGTGTCGGCTTTCATG AATGGCGGGGGAGGTGCAAGTCAGGAAGAAGACCTTGACTGCATTCAAGGCTTGTTGTCTCTGAGCCAAGGGGCA TGGAGATGA |
Transcript | >Ani_SJS100_1|g7543.t1 ATGTCTGATCCGGAGCCCTCTTCTGCACCATGCTCCTCCTCGCCGCCCTCAACCCAGGCGTCTGACTCTACTGCT GCCCTCAATTACGCCTTCCTAGTACACTCCCAAAAGACCTTAACTCAGAACCTTCCTCCACGCGTCGACAATAAA TTGCTGGCACGGCAAAAGCGGCGTCGGACTAGCCCCGAAGACCACGCAATCCTTGAAGCCGAGTATCAACGGAAC CCGAAGCCAGACAAAACGGCCCGAGCCAGTATAGTCAGTCGCGTCTCGTTGGGCGAGAAGGAAGTGCAAATCTGG TTCCAAAATCGTCGTCAAAATGATCGCCGGAAATCGAAACCATTGCAACCTCATGAGCTTCTCGCGCCTCGGTCG GACGTGTCCGACGCGTCAAAACGGGTAGCCGATGACAACCTTCCGACGAAGCCAGGATCTTCGAGCGGGACAGAG CAATCAGAGGGCAACTGCCAGGACAGGAACGTTGCTACACAATCACCCGACCATGCGTCTTTTGAATCGGACGTG GTGCATGGAGACAATAATGAGCTGGAGCAGTCAGGGTTAAGCTCTCAAACCAGCCTGGCTACTGAAGCTGTGGAG GATTCGCAGAGAGCTTCAGACGAGACGATGCCGGAACAACAACCGCCCCCGGTGCACGATGAAACTCATCTCGAT GATTCCAACCCAGCTTCTGTTAAGAGGAAACGATCATTTTCTGAGACCCGTGGCAATCGGCCGTTTATGCAGGGA ACATCAACACCTATGAAGTCTCCTCCATCCTTGCGGATATCGCTCTCGTTTGACGGAGAAGCTATGGTACGCAAA GAAGACGAGCTCACGCCATCTCCTCCGAAAGGACGAAATGCCCTGCGGATCGCCATGTCCTCTGATGGAAAAGCC GTGATCCGTGCTGATGGCGAGCCGTCTCCGTCAAAGAACCGCATTTCTATGTTCTCAGCGCGTAAGCCCAGGCTT GCAGGGCTTCGAAGGAGCAACAGTGCCGCGGCATTTAGTACGCCACGTGGTGGTTCCATGGAGACTGAAAAGTTG TTTGGAAGATCAAGAGATCCTCGCAACTGGGAATCGTTCTTTGACACCGATGCAAGAAGTGCACTTTCTACTCCG ACCAGCTCCCAAAGCGCACCGAACGCTGGCTCTCCCGCTTTGTTCCGCGCACGTGGTCAGCGTTCACTAACGAGG AGCATGTCGGCAAGGCATAGCAATGCCTTCAATTCTTCGGAATATCTTAATACCCCTGTTCCTAAGCCGACTGGC GACAAAAGACGGAAGATCTCCCGCACGGTCTCCTCATTGGGCCGGCTGGAGACAGGCCGTGCGACCCTTGGTGAT AAACTGTCTAACTCGAAGACGATATCGACAAAAGACGATGACCTGGAGTTACAGTGGGGTGACTCTGATAAGGAG AACTGGATACCAGGCACACGAGTCTCCCATGTTCGCCGGCGGACCACTTCGCATCATCACTCGCGGCGTTCAATA CTTAGAGAGGCCAACAGCAGGGATGCCAAAGCCAACAGGGATCTGGCATCAGGCGGAAGATACTCACGGGTGTCC CACCCGCACCAACGAGTGAGCGGGGTAATCGACAAGGATGTGCCTGAGATGGACGCCGAGGTGTCGGCTTTCATG AATGGCGGGGGAGGTGCAAGTCAGGAAGAAGACCTTGACTGCATTCAAGGCTTGTTGTCTCTGAGCCAAGGGGCA TGGAGATGA |
Gene | >Ani_SJS100_1|g7543.t1 ATGTCTGATCCGGAGCCCTCTTCTGCACCATGCTCCTCCTCGCCGCCCTCAACCCAGGCGTCTGACTCTACTGCT GCCCTCAATTACGCCTTCCTAGTACACTCCCAAAAGACCTTAACTCAGAACCTTCCTCCACGCGTCGACAATAAA TTGCTGGCACGGCAAAAGCGGCGTCGGACTAGGTATGCACGGAAACCAATTCCAGTCCTCATTGGCCCAATGGGT CTCGCTGCCAGTAGATCGCTAACACGTCACTGCTGTGGCCGTATAGCCCCGAAGACCACGCAATCCTTGAAGCCG AGTATCAACGGAACCCGAAGCCAGACAAAACGGCCCGAGCCAGTATAGTCAGTCGCGTCTCGTTGGGCGAGAAGG AAGTGCAAGTATGTCTGCAATATCCATGTAATACCTACACCTGATGTGCAATCTAATGTGTCTGAAAATCAGATC TGGTTCCAAAATCGTCGTCAAAATGATCGCCGGAAATCGAAACCATTGCAACCTCATGAGCTTCTCGCGCCTCGG TCGGACGTGTCCGACGCGTCAAAACGGGTAGCCGATGACAACCTTCCGACGAAGCCAGGATCTTCGAGCGGGACA GAGCAATCAGAGGGCAACTGCCAGGACAGGAACGTTGCTACACAATCACCCGACCATGCGTCTTTTGAATCGGAC GTGGTGCATGGAGACAATAATGAGCTGGAGCAGTCAGGGTTAAGCTCTCAAACCAGCCTGGCTACTGAAGCTGTG GAGGATTCGCAGAGAGCTTCAGACGAGACGATGCCGGAACAACAACCGCCCCCGGTGCACGATGAAACTCATCTC GATGATTCCAACCCAGCTTCTGTTAAGAGGAAACGATCATTTTCTGAGACCCGTGGCAATCGGCCGTTTATGCAG GGAACATCAACACCTATGAAGTCTCCTCCATCCTTGCGGATATCGCTCTCGTTTGACGGAGAAGCTATGGTACGC AAAGAAGACGAGCTCACGCCATCTCCTCCGAAAGGACGAAATGCCCTGCGGATCGCCATGTCCTCTGATGGAAAA GCCGTGATCCGTGCTGATGGCGAGCCGTCTCCGTCAAAGAACCGCATTTCTATGTTCTCAGCGCGTAAGCCCAGG CTTGCAGGGCTTCGAAGGAGCAACAGTGCCGCGGCATTTAGTACGCCACGTGGTGGTTCCATGGAGACTGAAAAG TTGTTTGGAAGATCAAGAGATCCTCGCAACTGGGAATCGTTCTTTGACACCGATGCAAGAAGTGCACTTTCTACT CCGACCAGCTCCCAAAGCGCACCGAACGCTGGCTCTCCCGCTTTGTTCCGCGCACGTGGTCAGCGTTCACTAACG AGGAGCATGTCGGCAAGGCATAGCAATGCCTTCAATTCTTCGGAATATCTTAATACCCCTGTTCCTAAGCCGACT GGCGACAAAAGACGGAAGATCTCCCGCACGGTCTCCTCATTGGGCCGGCTGGAGACAGGCCGTGCGACCCTTGGT GATAAACTGTCTAACTCGAAGACGATATCGACAAAAGACGATGACCTGGAGTTACAGTGGGGTGACTCTGATAAG GAGAACTGGATACCAGGCACACGAGTCTCCCATGTTCGCCGGCGGACCACTTCGCATCATCACTCGCGGCGTTCA ATACTTAGAGAGGCCAACAGCAGGGATGCCAAAGCCAACAGGGATCTGGCATCAGGCGGAAGATACTCACGGGTG TCCCACCCGCACCAACGAGTGAGCGGGGTAATCGACAAGGATGTGCCTGAGATGGACGCCGAGGTGTCGGCTTTC ATGAATGGCGGGGGAGGTGCAAGTCAGGAAGAAGACCTTGACTGCATTCAAGGCTTGTTGTCTCTGAGCCAAGGG GCATGGAGATGA |