© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g7526.t1 |
| Gene name | |
| Location | scaffold_053:126061..128769 |
| Strand | - |
| Gene length (bp) | 2708 |
| Transcript length (bp) | 2649 |
| Coding sequence length (bp) | 2649 |
| Protein length (aa) | 883 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00628 | PHD | PHD-finger | 1.8E-10 | 488 | 536 |
| Orthofinder run ID | 3 |
| Orthogroup | 7759 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g7526.t1 MAGTTQAPGDPNQVDSRVANQGSTNPYETNPDLLPNDDLFLARSIHYGRYAPRDTDFKPRYNHWCEPDPEVTSYW EGIVKELCTAENSLNVSGNREVFAAGSVVIRVDREPSVGAAAEKYSCANANELSAARKAEDTLKEMSIAVPVIYF CGTIDGKNVTVESRIPGVTLEVAWRYLTAEQIDMFKQQCRRVSQHLGGIDASPDRPSYVCSGLNSQASPDALEPE KNILFRERKEDEHVCLVHNNLVPSNIVIGDDKVIGITGWRQSGYFGFERADEIHRRFRILVASAIHGDKSTDLRA WSDLYEGLDAAGVVRPTSKQDTPIPLVKTEPLNTNLDKVPLNEESESKPPVSSLDGPAADHLTPKNIASLKNRGS SRASSSDRSSPATSTKPGPTRKSATAATKKGTGRKSTTKKRKANELESDNVDGGRSNTPSSTRAGKPANKKRNST SHTNSPAPDSKRKGSKNVEQDEIEEEEEDDSDDNDEIFCICRKPDNHTWMIGCDGGCEDWFHGKCVNIDPRDADL IDKYICPNCKEQGKGWTTWKPMCRLKECRKPARVNQKIPSKYCSDEHGREFMLQRTKLLLGTGTRAKTTAAGRAT TNGINSSESNSRDGTATPDRRDPDDLGSRGGVLTTGDLKAVVMGVSSAKEFRKLGESIISIPAKEESTTITTTDP ETETKNEKKIGLDFDVDWLTYSPDEASKLQKLRKQRDDLLHRKEMLRARNTFMTLVRQRSKSILEHLKQTDPKGG WKDICGFDSRLAWSDEEFDEWRLSEIGAKALEDGSPEALASSYPDASTDADGDTAMDDNNEDDFEKLSRGVCTKK RCERHKQWLKVQQQDAVFEENTLALDLSKCEKEAKNVVERAVLRMWAESDNAQIGGQ* |
| Coding | >Ani_SJS100_1|g7526.t1 ATGGCTGGGACTACGCAGGCGCCTGGCGATCCAAATCAGGTGGATAGTCGCGTTGCCAATCAAGGGTCGACAAAC CCATACGAAACAAATCCCGATCTCCTCCCAAACGATGACCTATTCCTCGCCCGGAGTATACACTATGGCCGCTAC GCGCCTCGCGACACTGACTTCAAGCCTCGATATAACCACTGGTGCGAACCGGATCCAGAGGTAACCTCATATTGG GAAGGGATTGTCAAAGAACTCTGTACAGCAGAAAATTCTCTGAATGTCTCGGGGAACCGGGAGGTCTTCGCTGCT GGCAGCGTTGTCATTCGCGTTGATCGTGAACCTTCAGTTGGCGCCGCTGCTGAGAAATACTCGTGTGCCAACGCC AATGAATTGAGTGCCGCAAGGAAGGCTGAGGATACGCTCAAGGAGATGTCTATCGCCGTGCCGGTCATTTACTTT TGCGGGACAATTGATGGGAAGAATGTCACTGTGGAATCTAGAATCCCTGGCGTTACTCTCGAGGTAGCCTGGCGA TACCTCACAGCTGAGCAGATCGACATGTTCAAACAGCAGTGCCGTCGTGTATCGCAACATTTGGGCGGAATAGAC GCATCCCCCGATCGCCCTTCCTACGTTTGCAGTGGACTCAACTCACAAGCGTCACCTGATGCCCTGGAACCAGAG AAGAATATACTTTTTCGTGAAAGGAAGGAGGACGAACATGTCTGTCTGGTACACAACAACCTGGTACCGTCGAAC ATTGTTATCGGCGATGATAAGGTGATCGGGATAACTGGTTGGCGACAGAGCGGGTACTTCGGCTTTGAAAGGGCA GATGAGATACATCGACGCTTTAGGATACTGGTGGCATCTGCCATACATGGAGACAAATCTACTGACCTGCGAGCG TGGTCTGACTTATATGAAGGACTTGATGCCGCAGGAGTGGTTAGACCCACAAGCAAGCAAGATACGCCCATTCCT CTAGTCAAGACTGAGCCTCTCAACACGAATCTGGATAAAGTCCCTCTCAATGAAGAGTCGGAATCCAAGCCACCG GTTTCTTCACTTGACGGCCCGGCTGCGGACCATCTCACTCCAAAGAACATTGCGAGTCTCAAGAATAGGGGGTCT TCTAGAGCGTCGTCTTCTGACCGCTCCTCGCCAGCTACGTCCACGAAACCTGGCCCGACCCGGAAATCTGCTACT GCTGCAACCAAGAAAGGGACTGGGCGAAAATCGACAACCAAAAAGAGGAAAGCAAACGAATTGGAAAGCGATAAT GTTGATGGCGGTCGTTCCAACACTCCATCTTCGACTCGTGCTGGCAAGCCCGCGAACAAAAAGCGGAATTCTACC TCGCACACCAACTCACCGGCCCCGGATAGCAAAAGGAAAGGGAGCAAGAACGTTGAACAGGATGAGATAGAAGAA GAGGAAGAAGATGACTCTGATGATAACGATGAAATATTCTGCATCTGCCGCAAACCTGATAATCATACATGGATG ATCGGGTGTGATGGTGGATGTGAGGATTGGTTTCACGGGAAGTGCGTCAACATCGACCCGAGAGACGCAGACCTC ATTGACAAGTACATCTGTCCGAATTGCAAAGAGCAAGGCAAAGGATGGACCACATGGAAACCTATGTGCCGGCTA AAGGAATGCCGCAAGCCCGCCCGAGTCAACCAGAAAATCCCTAGCAAATACTGCTCAGACGAACATGGCCGGGAG TTCATGCTTCAGCGAACTAAGCTTCTCCTGGGTACGGGAACGAGAGCAAAGACGACCGCAGCAGGCCGAGCAACC ACCAATGGCATCAATTCGAGCGAAAGCAATAGTCGTGATGGGACCGCTACACCAGACAGACGAGATCCGGATGAT TTAGGAAGTCGAGGTGGAGTCCTTACAACAGGCGATCTCAAAGCCGTCGTAATGGGCGTCAGCTCAGCTAAAGAA TTCCGCAAACTAGGCGAAAGCATCATATCGATCCCAGCCAAAGAGGAAAGCACCACCATTACCACCACCGATCCC GAAACAGAGACCAAGAATGAAAAGAAGATTGGTTTGGATTTCGACGTGGACTGGCTCACGTACTCACCCGACGAA GCATCCAAACTACAGAAGCTCCGTAAGCAACGGGACGACCTACTCCATCGCAAAGAGATGCTCCGCGCCCGAAAC ACATTCATGACACTGGTGCGCCAGCGATCCAAGAGCATCCTGGAGCACCTAAAACAAACCGACCCGAAAGGCGGA TGGAAAGATATCTGCGGTTTCGACAGCAGACTTGCATGGTCGGACGAAGAATTTGATGAATGGCGGTTATCCGAA ATTGGCGCGAAAGCACTCGAGGATGGCTCGCCCGAAGCTCTGGCATCAAGCTATCCCGACGCTTCCACGGACGCC GATGGCGACACCGCCATGGATGACAACAACGAAGATGACTTCGAGAAACTCTCACGTGGTGTCTGTACTAAGAAG CGTTGCGAGAGACATAAACAATGGCTCAAGGTCCAACAGCAAGATGCTGTATTCGAGGAAAACACCCTCGCTCTG GATCTAAGCAAATGCGAGAAGGAAGCGAAGAATGTCGTGGAGAGGGCCGTTCTTAGGATGTGGGCCGAATCAGAC AATGCGCAAATTGGTGGCCAGTAA |
| Transcript | >Ani_SJS100_1|g7526.t1 ATGGCTGGGACTACGCAGGCGCCTGGCGATCCAAATCAGGTGGATAGTCGCGTTGCCAATCAAGGGTCGACAAAC CCATACGAAACAAATCCCGATCTCCTCCCAAACGATGACCTATTCCTCGCCCGGAGTATACACTATGGCCGCTAC GCGCCTCGCGACACTGACTTCAAGCCTCGATATAACCACTGGTGCGAACCGGATCCAGAGGTAACCTCATATTGG GAAGGGATTGTCAAAGAACTCTGTACAGCAGAAAATTCTCTGAATGTCTCGGGGAACCGGGAGGTCTTCGCTGCT GGCAGCGTTGTCATTCGCGTTGATCGTGAACCTTCAGTTGGCGCCGCTGCTGAGAAATACTCGTGTGCCAACGCC AATGAATTGAGTGCCGCAAGGAAGGCTGAGGATACGCTCAAGGAGATGTCTATCGCCGTGCCGGTCATTTACTTT TGCGGGACAATTGATGGGAAGAATGTCACTGTGGAATCTAGAATCCCTGGCGTTACTCTCGAGGTAGCCTGGCGA TACCTCACAGCTGAGCAGATCGACATGTTCAAACAGCAGTGCCGTCGTGTATCGCAACATTTGGGCGGAATAGAC GCATCCCCCGATCGCCCTTCCTACGTTTGCAGTGGACTCAACTCACAAGCGTCACCTGATGCCCTGGAACCAGAG AAGAATATACTTTTTCGTGAAAGGAAGGAGGACGAACATGTCTGTCTGGTACACAACAACCTGGTACCGTCGAAC ATTGTTATCGGCGATGATAAGGTGATCGGGATAACTGGTTGGCGACAGAGCGGGTACTTCGGCTTTGAAAGGGCA GATGAGATACATCGACGCTTTAGGATACTGGTGGCATCTGCCATACATGGAGACAAATCTACTGACCTGCGAGCG TGGTCTGACTTATATGAAGGACTTGATGCCGCAGGAGTGGTTAGACCCACAAGCAAGCAAGATACGCCCATTCCT CTAGTCAAGACTGAGCCTCTCAACACGAATCTGGATAAAGTCCCTCTCAATGAAGAGTCGGAATCCAAGCCACCG GTTTCTTCACTTGACGGCCCGGCTGCGGACCATCTCACTCCAAAGAACATTGCGAGTCTCAAGAATAGGGGGTCT TCTAGAGCGTCGTCTTCTGACCGCTCCTCGCCAGCTACGTCCACGAAACCTGGCCCGACCCGGAAATCTGCTACT GCTGCAACCAAGAAAGGGACTGGGCGAAAATCGACAACCAAAAAGAGGAAAGCAAACGAATTGGAAAGCGATAAT GTTGATGGCGGTCGTTCCAACACTCCATCTTCGACTCGTGCTGGCAAGCCCGCGAACAAAAAGCGGAATTCTACC TCGCACACCAACTCACCGGCCCCGGATAGCAAAAGGAAAGGGAGCAAGAACGTTGAACAGGATGAGATAGAAGAA GAGGAAGAAGATGACTCTGATGATAACGATGAAATATTCTGCATCTGCCGCAAACCTGATAATCATACATGGATG ATCGGGTGTGATGGTGGATGTGAGGATTGGTTTCACGGGAAGTGCGTCAACATCGACCCGAGAGACGCAGACCTC ATTGACAAGTACATCTGTCCGAATTGCAAAGAGCAAGGCAAAGGATGGACCACATGGAAACCTATGTGCCGGCTA AAGGAATGCCGCAAGCCCGCCCGAGTCAACCAGAAAATCCCTAGCAAATACTGCTCAGACGAACATGGCCGGGAG TTCATGCTTCAGCGAACTAAGCTTCTCCTGGGTACGGGAACGAGAGCAAAGACGACCGCAGCAGGCCGAGCAACC ACCAATGGCATCAATTCGAGCGAAAGCAATAGTCGTGATGGGACCGCTACACCAGACAGACGAGATCCGGATGAT TTAGGAAGTCGAGGTGGAGTCCTTACAACAGGCGATCTCAAAGCCGTCGTAATGGGCGTCAGCTCAGCTAAAGAA TTCCGCAAACTAGGCGAAAGCATCATATCGATCCCAGCCAAAGAGGAAAGCACCACCATTACCACCACCGATCCC GAAACAGAGACCAAGAATGAAAAGAAGATTGGTTTGGATTTCGACGTGGACTGGCTCACGTACTCACCCGACGAA GCATCCAAACTACAGAAGCTCCGTAAGCAACGGGACGACCTACTCCATCGCAAAGAGATGCTCCGCGCCCGAAAC ACATTCATGACACTGGTGCGCCAGCGATCCAAGAGCATCCTGGAGCACCTAAAACAAACCGACCCGAAAGGCGGA TGGAAAGATATCTGCGGTTTCGACAGCAGACTTGCATGGTCGGACGAAGAATTTGATGAATGGCGGTTATCCGAA ATTGGCGCGAAAGCACTCGAGGATGGCTCGCCCGAAGCTCTGGCATCAAGCTATCCCGACGCTTCCACGGACGCC GATGGCGACACCGCCATGGATGACAACAACGAAGATGACTTCGAGAAACTCTCACGTGGTGTCTGTACTAAGAAG CGTTGCGAGAGACATAAACAATGGCTCAAGGTCCAACAGCAAGATGCTGTATTCGAGGAAAACACCCTCGCTCTG GATCTAAGCAAATGCGAGAAGGAAGCGAAGAATGTCGTGGAGAGGGCCGTTCTTAGGATGTGGGCCGAATCAGAC AATGCGCAAATTGGTGGCCAGTAA |
| Gene | >Ani_SJS100_1|g7526.t1 ATGGCTGGGACTACGCAGGCGCCTGGCGATCCAAATCAGGTGGATAGTCGCGTTGCCAATCAAGGGTCGACAAAC CCATACGAAACAAATCCCGATCTCCTCCCAAACGATGACCTATTCCTCGCCCGGAGTATACACTATGGCCGCTAC GCGCCTCGCGACACTGACTTCAAGCCTCGATATAACCACTGGTGCGAACCGGATCCAGAGGTAACCTCATATTGG GAAGGGATTGTCAAAGAACTCTGTACAGCAGAAAATTCTCTGAATGTCTCGGGGAACCGGGAGGTCTTCGCTGCT GGCAGCGTTGTCATTCGCGTTGATCGTGAACCTTCAGTTGGCGCCGCTGCTGAGAAATACTCGTGTGCCAACGCC AATGAATTGAGTGCCGCAAGGAAGGCTGAGGATACGCTCAAGGAGATGTCTATCGCCGTGCCGGTCATTTACTTT TGCGGGACAATTGATGGGAAGAATGTCACTGTGGAATCTAGAATCCCTGGCGTTACTCTCGAGGTAGCCTGGCGA TACCTCACAGCTGAGCAGATCGACATGTTCAAACAGCAGTGCCGTCGTGTATCGCAACATTTGGGCGGAATAGAC GCATCCCCCGATCGCCCTTCCTACGTTTGCAGTGGACTCAACTCACAAGCGTCACCTGATGCCCTGGAACCAGAG AAGAATATACTTTTTCGTGAAAGGAAGGAGGACGAACATGTCTGTCTGGTACACAACAACCTGGTACCGTCGAAC ATTGTTATCGGCGATGATAAGGTGATCGGGATAACTGGTTGGCGACAGAGCGGGTACTTCGGCTTTGAAAGGGCA GATGAGATACATCGACGCTTTAGGATACTGGTGGCATCTGCCATACATGGAGACAAATCTACTGACCTGCGAGCG TGGTCTGACTTATATGAAGGACTTGATGCCGCAGGAGTGGTTAGACCCACAAGCAAGCAAGATACGCCCATTCCT CTAGTCAAGACTGAGCCTCTCAACACGAATCTGGATAAAGTCCCTCTCAATGAAGAGTCGGAATCCAAGCCACCG GTTTCTTCACTTGACGGCCCGGCTGCGGACCATCTCACTCCAAAGAACATTGCGAGTCTCAAGAATAGGGGGTCT TCTAGAGCGTCGTCTTCTGACCGCTCCTCGCCAGCTACGTCCACGAAACCTGGCCCGACCCGGAAATCTGCTACT GCTGCAACCAAGAAAGGGACTGGGCGAAAATCGACAACCAAAAAGAGGAAAGCAAACGAATTGGAAAGCGATAAT GTTGATGGCGGTCGTTCCAACACTCCATCTTCGACTCGTGCTGGCAAGCCCGCGAACAAAAAGCGGAATTCTACC TCGCACACCAACTCACCGGCCCCGGATAGCAAAAGGAAAGGGAGCAAGAACGTTGAACAGGATGAGATAGAAGAA GAGGAAGAAGATGACTCTGATGATAACGATGAAATATTCTGCATCTGCCGCAAACCTGATAATCATACATGGATG ATCGGGTGTGATGGTGGATGTGAGGATTGGTTTCACGGGAAGTGCGTCAACATCGACCCGAGAGACGCAGACCTC ATTGACAAGTACATCTGTATGACATCCTTTTGATATGCCACGCATAATCTATACCCGTGCACTAACACTACGCAG GTCCGAATTGCAAAGAGCAAGGCAAAGGATGGACCACATGGAAACCTATGTGCCGGCTAAAGGAATGCCGCAAGC CCGCCCGAGTCAACCAGAAAATCCCTAGCAAATACTGCTCAGACGAACATGGCCGGGAGTTCATGCTTCAGCGAA CTAAGCTTCTCCTGGGTACGGGAACGAGAGCAAAGACGACCGCAGCAGGCCGAGCAACCACCAATGGCATCAATT CGAGCGAAAGCAATAGTCGTGATGGGACCGCTACACCAGACAGACGAGATCCGGATGATTTAGGAAGTCGAGGTG GAGTCCTTACAACAGGCGATCTCAAAGCCGTCGTAATGGGCGTCAGCTCAGCTAAAGAATTCCGCAAACTAGGCG AAAGCATCATATCGATCCCAGCCAAAGAGGAAAGCACCACCATTACCACCACCGATCCCGAAACAGAGACCAAGA ATGAAAAGAAGATTGGTTTGGATTTCGACGTGGACTGGCTCACGTACTCACCCGACGAAGCATCCAAACTACAGA AGCTCCGTAAGCAACGGGACGACCTACTCCATCGCAAAGAGATGCTCCGCGCCCGAAACACATTCATGACACTGG TGCGCCAGCGATCCAAGAGCATCCTGGAGCACCTAAAACAAACCGACCCGAAAGGCGGATGGAAAGATATCTGCG GTTTCGACAGCAGACTTGCATGGTCGGACGAAGAATTTGATGAATGGCGGTTATCCGAAATTGGCGCGAAAGCAC TCGAGGATGGCTCGCCCGAAGCTCTGGCATCAAGCTATCCCGACGCTTCCACGGACGCCGATGGCGACACCGCCA TGGATGACAACAACGAAGATGACTTCGAGAAACTCTCACGTGGTGTCTGTACTAAGAAGCGTTGCGAGAGACATA AACAATGGCTCAAGGTCCAACAGCAAGATGCTGTATTCGAGGAAAACACCCTCGCTCTGGATCTAAGCAAATGCG AGAAGGAAGCGAAGAATGTCGTGGAGAGGGCCGTTCTTAGGATGTGGGCCGAATCAGACAATGCGCAAATTGGTG GCCAGTAA |