Protein ID | Ani_SJS100_1|g7512.t1 |
Gene name | |
Location | scaffold_053:94224..96256 |
Strand | - |
Gene length (bp) | 2032 |
Transcript length (bp) | 1977 |
Coding sequence length (bp) | 1977 |
Protein length (aa) | 659 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00400 | WD40 | WD domain, G-beta repeat | 3.9E-05 | 321 | 351 |
PF00400 | WD40 | WD domain, G-beta repeat | 1.1E-04 | 445 | 480 |
PF00400 | WD40 | WD domain, G-beta repeat | 6.6E-02 | 486 | 520 |
PF00400 | WD40 | WD domain, G-beta repeat | 2.4E-02 | 569 | 604 |
PF12937 | F-box-like | F-box-like | 1.6E-10 | 225 | 268 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g7512.t1 MAPRDSSTITSRRRPSFSLRTRPRTATTSTAHTTGLEHDVWHGLSVVDSGDDDDGQVVEDMNHFPEPVPRRREAK SFSSLRHPVDGLRALGRRLSVTLRNKSSRHSVHPQPETMRNSWCNETSINRRPSLESISALHGFYAHAGAPVPGN GLEPPVFSNDIYAGAAARAAAAAQNELARALRDSIKLSDARLTQDSESGIGIDLRDRSELSDPALAIVRIDPVGC LPPEVMSQVFSYLDPESLMQSELVSRAWSEQASSRHIWRHVFRHTYGQHPSGLPFKKRQSAGLGKTHPKQDWKRM FLVRRALEHRWKEGKAAAIYLHGHKDSVYCAQFDEDKIITGSRDRTIRVWDAHYPWPCRKIIGPPPGDVSGIGPV NNPAQQSAGKPPFLTICPPPTRSAGIMAPIEHSADYHSASILCLQFDEEIMVTGSSDFTCIVWDIKNDYKPIRRL VGHQAGVLDVCFDDRYIVSCSKDTTICVWDRHTGALVKKLLGHRGPVNAVQLRGDLVVSASGDGVAKLWNITSGL CVKEFPSKDRGLACVEFSDDARTILTGGNDQVIYQFDANTGDMVNELKGHAGLVRSLHLDSMNQRIVSGSYDMSV KVFDAQSGELSIDLPGWTTSWMLSVKSDYRRIVATSQDSRAVIMDFGYGLDGIDLLKE* |
Coding | >Ani_SJS100_1|g7512.t1 ATGGCTCCACGAGACTCTAGCACTATTACGTCCCGTCGACGCCCCTCTTTCTCCCTCCGCACTCGGCCTCGAACT GCTACGACCTCAACCGCTCATACAACCGGATTGGAACATGACGTGTGGCACGGGCTGTCTGTGGTGGATTCGGGA GATGATGATGACGGCCAGGTCGTGGAGGATATGAACCATTTTCCAGAGCCTGTCCCTAGGCGCCGTGAAGCAAAG AGCTTCTCTAGCTTACGCCATCCCGTGGACGGTCTGCGAGCTCTGGGTCGTCGCCTCTCGGTGACGCTCCGCAAC AAGTCGTCCAGGCATTCTGTTCATCCTCAACCAGAAACCATGAGAAATTCCTGGTGCAATGAAACTAGCATTAAT CGTCGACCATCCCTGGAAAGCATCTCCGCGCTGCACGGTTTCTACGCCCATGCTGGCGCCCCTGTTCCTGGAAAT GGCCTGGAGCCACCTGTTTTCTCGAATGACATTTATGCGGGAGCGGCAGCTCGCGCTGCAGCTGCAGCTCAGAAT GAGCTGGCAAGAGCTCTGCGGGACAGTATCAAGCTCTCGGATGCGAGATTGACTCAAGACTCGGAAAGTGGCATT GGAATCGATCTACGCGATCGCTCAGAGCTATCTGACCCAGCCCTGGCTATAGTACGGATTGATCCTGTTGGCTGC CTTCCTCCTGAGGTCATGTCACAAGTGTTCTCCTACCTCGATCCCGAGTCCCTTATGCAGTCTGAGCTGGTTTCT CGTGCTTGGAGTGAGCAGGCATCCTCCCGGCACATCTGGCGGCACGTGTTCCGCCATACTTACGGACAACACCCT AGCGGGCTCCCTTTCAAGAAGAGACAATCTGCTGGTTTGGGTAAGACTCATCCCAAGCAGGATTGGAAGCGGATG TTCCTGGTTCGCCGTGCTTTGGAACATCGGTGGAAGGAAGGAAAGGCCGCTGCTATCTACCTTCATGGCCATAAG GACAGTGTCTACTGTGCGCAATTTGATGAGGACAAAATCATCACTGGCTCTCGCGATCGAACCATTCGTGTATGG GACGCTCATTACCCTTGGCCATGCCGGAAGATCATTGGCCCTCCCCCGGGCGATGTCTCCGGTATTGGTCCGGTC AATAACCCGGCGCAGCAATCAGCCGGAAAGCCGCCCTTCTTGACCATCTGCCCCCCGCCGACGCGTTCTGCGGGG ATCATGGCTCCCATTGAGCACAGCGCAGACTATCACAGTGCTTCCATTCTCTGCCTCCAGTTTGACGAAGAAATC ATGGTCACCGGTTCGTCTGATTTTACCTGCATTGTGTGGGATATCAAGAACGACTACAAGCCGATTCGTCGCCTT GTGGGCCATCAGGCAGGAGTGCTGGATGTCTGCTTTGATGACCGGTACATTGTGTCCTGCTCCAAAGACACTACA ATTTGTGTGTGGGATCGGCACACAGGGGCCTTGGTGAAGAAACTCCTTGGCCACAGAGGTCCAGTGAACGCTGTT CAGCTGCGCGGAGATCTTGTCGTTTCTGCAAGCGGGGACGGCGTCGCCAAGCTCTGGAACATCACTTCTGGCCTT TGTGTCAAGGAGTTTCCCAGCAAGGACCGTGGACTGGCATGTGTTGAATTCAGCGATGATGCTCGAACCATTCTC ACTGGCGGCAACGATCAAGTGATCTATCAGTTTGACGCCAATACCGGCGACATGGTCAATGAGCTCAAGGGCCAC GCGGGCTTGGTTCGCTCCTTGCACCTCGACAGTATGAACCAAAGAATCGTCAGTGGTAGCTATGACATGAGTGTT AAAGTATTCGATGCTCAAAGTGGCGAGCTATCCATTGACCTTCCGGGCTGGACAACGAGCTGGATGCTCAGCGTC AAGTCCGATTATCGGCGCATTGTGGCTACCAGCCAAGACTCTCGCGCTGTCATAATGGATTTTGGATACGGACTA GATGGCATAGACTTGCTGAAAGAGTAA |
Transcript | >Ani_SJS100_1|g7512.t1 ATGGCTCCACGAGACTCTAGCACTATTACGTCCCGTCGACGCCCCTCTTTCTCCCTCCGCACTCGGCCTCGAACT GCTACGACCTCAACCGCTCATACAACCGGATTGGAACATGACGTGTGGCACGGGCTGTCTGTGGTGGATTCGGGA GATGATGATGACGGCCAGGTCGTGGAGGATATGAACCATTTTCCAGAGCCTGTCCCTAGGCGCCGTGAAGCAAAG AGCTTCTCTAGCTTACGCCATCCCGTGGACGGTCTGCGAGCTCTGGGTCGTCGCCTCTCGGTGACGCTCCGCAAC AAGTCGTCCAGGCATTCTGTTCATCCTCAACCAGAAACCATGAGAAATTCCTGGTGCAATGAAACTAGCATTAAT CGTCGACCATCCCTGGAAAGCATCTCCGCGCTGCACGGTTTCTACGCCCATGCTGGCGCCCCTGTTCCTGGAAAT GGCCTGGAGCCACCTGTTTTCTCGAATGACATTTATGCGGGAGCGGCAGCTCGCGCTGCAGCTGCAGCTCAGAAT GAGCTGGCAAGAGCTCTGCGGGACAGTATCAAGCTCTCGGATGCGAGATTGACTCAAGACTCGGAAAGTGGCATT GGAATCGATCTACGCGATCGCTCAGAGCTATCTGACCCAGCCCTGGCTATAGTACGGATTGATCCTGTTGGCTGC CTTCCTCCTGAGGTCATGTCACAAGTGTTCTCCTACCTCGATCCCGAGTCCCTTATGCAGTCTGAGCTGGTTTCT CGTGCTTGGAGTGAGCAGGCATCCTCCCGGCACATCTGGCGGCACGTGTTCCGCCATACTTACGGACAACACCCT AGCGGGCTCCCTTTCAAGAAGAGACAATCTGCTGGTTTGGGTAAGACTCATCCCAAGCAGGATTGGAAGCGGATG TTCCTGGTTCGCCGTGCTTTGGAACATCGGTGGAAGGAAGGAAAGGCCGCTGCTATCTACCTTCATGGCCATAAG GACAGTGTCTACTGTGCGCAATTTGATGAGGACAAAATCATCACTGGCTCTCGCGATCGAACCATTCGTGTATGG GACGCTCATTACCCTTGGCCATGCCGGAAGATCATTGGCCCTCCCCCGGGCGATGTCTCCGGTATTGGTCCGGTC AATAACCCGGCGCAGCAATCAGCCGGAAAGCCGCCCTTCTTGACCATCTGCCCCCCGCCGACGCGTTCTGCGGGG ATCATGGCTCCCATTGAGCACAGCGCAGACTATCACAGTGCTTCCATTCTCTGCCTCCAGTTTGACGAAGAAATC ATGGTCACCGGTTCGTCTGATTTTACCTGCATTGTGTGGGATATCAAGAACGACTACAAGCCGATTCGTCGCCTT GTGGGCCATCAGGCAGGAGTGCTGGATGTCTGCTTTGATGACCGGTACATTGTGTCCTGCTCCAAAGACACTACA ATTTGTGTGTGGGATCGGCACACAGGGGCCTTGGTGAAGAAACTCCTTGGCCACAGAGGTCCAGTGAACGCTGTT CAGCTGCGCGGAGATCTTGTCGTTTCTGCAAGCGGGGACGGCGTCGCCAAGCTCTGGAACATCACTTCTGGCCTT TGTGTCAAGGAGTTTCCCAGCAAGGACCGTGGACTGGCATGTGTTGAATTCAGCGATGATGCTCGAACCATTCTC ACTGGCGGCAACGATCAAGTGATCTATCAGTTTGACGCCAATACCGGCGACATGGTCAATGAGCTCAAGGGCCAC GCGGGCTTGGTTCGCTCCTTGCACCTCGACAGTATGAACCAAAGAATCGTCAGTGGTAGCTATGACATGAGTGTT AAAGTATTCGATGCTCAAAGTGGCGAGCTATCCATTGACCTTCCGGGCTGGACAACGAGCTGGATGCTCAGCGTC AAGTCCGATTATCGGCGCATTGTGGCTACCAGCCAAGACTCTCGCGCTGTCATAATGGATTTTGGATACGGACTA GATGGCATAGACTTGCTGAAAGAGTAA |
Gene | >Ani_SJS100_1|g7512.t1 ATGGCTCCACGAGACTCTAGCACTATTACGTCCCGTCGACGCCCCTCTTTCTCCCTCCGCACTCGGCCTCGAACT GCTACGACCTCAACCGCTCATACAACCGGATTGGAACATGACGTGTGGCACGGGCTGTCTGTGGTGGATTCGGGA GATGATGATGACGGCCAGGTCGTGGAGGATATGAACCATTTTCCAGAGCCTGTCCCTAGGCGCCGTGAAGCAAAG AGCTTCTCTAGCTTACGCCATCCCGTGGACGGTCTGCGAGCTCTGGGTCGTCGCCTCTCGGTGACGCTCCGCAAC AAGTCGTCCAGGCATTCTGTTCATCCTCAACCAGAAACCATGAGAAATTCCTGGTGCAATGAAACTAGCATTAAT CGTCGACCATCCCTGGAAAGCATCTCCGCGCTGCACGGTTTCTACGCCCATGCTGGCGCCCCTGTTCCTGGAAAT GGCCTGGAGCCACCTGTTTTCTCGAATGACATTTATGCGGGAGCGGCAGCTCGCGCTGCAGCTGCAGCTCAGAAT GAGCTGGCAAGAGCTCTGCGGGACAGTATCAAGCTCTCGGATGCGAGATTGACTCAAGACTCGGAAAGTGGCATT GGAATCGATCTACGCGATCGCTCAGAGCTATCTGACCCAGCCCTGGCTATAGTACGGATTGATCCTGTTGGCTGC CTTCCTCCTGAGGTCATGTCACAAGTGTTCTCCTACCTCGATCCCGAGTCCCTTATGCAGTCTGAGCTGGTTTCT CGTGCTTGGAGTGAGCAGGCATCCTCCCGGCACATCTGGCGGCACGTGTTCCGCCATACTTACGGACAACACCCT AGCGGGCTCCCTTTCAAGAAGAGACAATCTGCTGGTTTGGGTAAGACTCATCCCAAGCAGGATTGGAAGCGGATG TTCCTGGTTCGCCGTGCTTTGGAACATCGGTGGAAGGAAGGAAAGGCCGCTGCTATCTACCTTCATGGCCATAAG GACAGTGTCTACTGTGCGCAATTTGATGAGTAAGTTACTCGTTGGTAAACATCTGCATATAAGCTCTTTTTAATT ATACCCCAGGGACAAAATCATCACTGGCTCTCGCGATCGAACCATTCGTGTATGGGACGCTCATTACCCTTGGCC ATGCCGGAAGATCATTGGCCCTCCCCCGGGCGATGTCTCCGGTATTGGTCCGGTCAATAACCCGGCGCAGCAATC AGCCGGAAAGCCGCCCTTCTTGACCATCTGCCCCCCGCCGACGCGTTCTGCGGGGATCATGGCTCCCATTGAGCA CAGCGCAGACTATCACAGTGCTTCCATTCTCTGCCTCCAGTTTGACGAAGAAATCATGGTCACCGGTTCGTCTGA TTTTACCTGCATTGTGTGGGATATCAAGAACGACTACAAGCCGATTCGTCGCCTTGTGGGCCATCAGGCAGGAGT GCTGGATGTCTGCTTTGATGACCGGTACATTGTGTCCTGCTCCAAAGACACTACAATTTGTGTGTGGGATCGGCA CACAGGGGCCTTGGTGAAGAAACTCCTTGGCCACAGAGGTCCAGTGAACGCTGTTCAGCTGCGCGGAGATCTTGT CGTTTCTGCAAGCGGGGACGGCGTCGCCAAGCTCTGGAACATCACTTCTGGCCTTTGTGTCAAGGAGTTTCCCAG CAAGGACCGTGGACTGGCATGTGTTGAATTCAGCGATGATGCTCGAACCATTCTCACTGGCGGCAACGATCAAGT GATCTATCAGTTTGACGCCAATACCGGCGACATGGTCAATGAGCTCAAGGGCCACGCGGGCTTGGTTCGCTCCTT GCACCTCGACAGTATGAACCAAAGAATCGTCAGTGGTAGCTATGACATGAGTGTTAAAGTATTCGATGCTCAAAG TGGCGAGCTATCCATTGACCTTCCGGGCTGGACAACGAGCTGGATGCTCAGCGTCAAGTCCGATTATCGGCGCAT TGTGGCTACCAGCCAAGACTCTCGCGCTGTCATAATGGATTTTGGATACGGACTAGATGGCATAGACTTGCTGAA AGAGTAA |