© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g748.t1 |
| Gene name | |
| Location | scaffold_002:951104..954419 |
| Strand | - |
| Gene length (bp) | 3315 |
| Transcript length (bp) | 2385 |
| Coding sequence length (bp) | 2385 |
| Protein length (aa) | 795 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05426 | Alginate_lyase | Alginate lyase | 1.1E-17 | 470 | 702 |
| PF05978 | UNC-93 | Ion channel regulatory protein UNC-93 | 6.5E-11 | 61 | 265 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.6E-10 | 26 | 322 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0016829 | lyase activity | Yes |
| GO:0042597 | periplasmic space | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 34 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 21 | 40 | 19 |
| 2 | 55 | 77 | 22 |
| 3 | 82 | 104 | 22 |
| 4 | 108 | 130 | 22 |
| 5 | 151 | 170 | 19 |
| 6 | 180 | 202 | 22 |
| 7 | 240 | 259 | 19 |
| 8 | 269 | 291 | 22 |
| 9 | 304 | 323 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g748.t1 MADAEIGSGAKAPLKRVWYRTSLFNACVIGAVGFLAPGLWNAMNSLGAGGEEKPFLVNAANALVFGLMGIFCIFG APIANRIGLKWALLLGAAGYPVYAAGLYTNNRFGNVWLVLVGAVACGISAGLFWASEGAIAIGYPEPSKRARYLN IWVWWRTLGPIIGNSIVLALNIKNQDKGSVGYSTYIVFIVLQCLAVPVALLLTPPDKVQRADGSPVILRVEDSWK AEFQALWKTCKNRTVILLLPIFWAVYFNEYSGNFETYYFGVRARALIAFLSDWVTILASQIISHWLDWKRVDAKK RLTYGWYWVIIVHVTAYILGWVVQEQYTSAHKKNPDLGTMDYTSPGFAKGAFVLFMWTFAQQTGQNWLYYLVGSM TDNIAELTRLTGVLRGQESFVFSSLAVASTARHGESSRVSNRDTSSFNHPGLLHTATDFSRIASKVSSNTEPWLT GWYKLTNSSNINLDYTPSPKTIVYRGADGTHTENYPSLYKDIAAAYAMAIYWKVTGNTSYADVVVNILDEWSSTL TEISGTTDMYLAAGIYGYEFANVAEIMRTYSAWPSANLTRFADMMVDVFYPLNHDFLQNHHGAAVDHYWANWDLC NIASVLSIGVLTDNETMFDEGLTYFKSGAGNGQIEKAIWKLYQVDGESLGQGQEAGRDQGHSMLDFALLGPIAQT AYNQGTDLFEYLDNRILAGAEYVAKYNLGNDVPYTTYNNSDDVNQTVISNSSRGDIRPIWELLYNHYGVLKGLDV TYTKEYRDMVVEDGDGAEGGGGDYGTTSGGYDQLGWGTLMYTLE* |
| Coding | >Ani_SJS100_1|g748.t1 ATGGCCGACGCTGAGATTGGAAGTGGCGCCAAAGCGCCACTCAAGCGAGTGTGGTACCGCACTTCACTCTTCAAT GCTTGCGTGATCGGCGCTGTTGGTTTCCTCGCCCCCGGGCTATGGAACGCCATGAACTCCCTCGGAGCCGGAGGC GAGGAGAAGCCCTTTCTGGTGAATGCTGCCAATGCACTAGTTTTCGGGCTGATGGGCATTTTCTGCATCTTCGGC GCGCCCATTGCCAACCGCATCGGACTGAAATGGGCCCTTCTCCTCGGCGCCGCCGGCTACCCCGTCTACGCAGCC GGTCTCTACACCAACAACCGGTTCGGCAACGTCTGGCTCGTTCTGGTCGGTGCCGTGGCATGCGGCATCTCCGCA GGACTCTTCTGGGCCAGTGAAGGCGCCATCGCCATTGGATACCCAGAGCCATCGAAACGAGCCCGATACCTCAAC ATCTGGGTATGGTGGCGCACCCTCGGACCCATTATCGGGAACTCGATTGTCCTAGCCCTCAACATCAAGAACCAG GACAAAGGAAGTGTGGGATACTCTACCTACATTGTCTTCATCGTTCTACAATGTCTGGCTGTCCCCGTTGCGTTA CTTCTCACCCCGCCCGACAAAGTCCAACGCGCCGATGGCTCTCCAGTCATCCTTCGGGTCGAGGACTCCTGGAAG GCAGAATTTCAAGCACTCTGGAAAACATGCAAAAACCGCACCGTCATCCTTCTGCTCCCAATCTTCTGGGCTGTC TACTTCAATGAATACTCGGGTAACTTCGAAACTTATTACTTTGGAGTGCGAGCTCGTGCGCTTATCGCGTTCCTC TCCGACTGGGTTACGATTCTCGCTTCGCAGATCATCTCTCACTGGCTGGATTGGAAGCGTGTCGACGCTAAGAAG CGTCTCACGTACGGCTGGTACTGGGTGATCATTGTGCATGTGACGGCGTATATTCTTGGCTGGGTCGTGCAGGAG CAATATACATCCGCCCATAAAAAGAACCCTGATTTGGGGACGATGGATTATACCAGTCCTGGATTCGCTAAGGGC GCGTTTGTCCTTTTCATGTGGACCTTTGCTCAGCAGACGGGCCAGAATTGGCTGTATTATTTGGTGGGAAGCATG ACGGATAATATCGCCGAGTTGACCAGATTGACGGGTGTGTTGCGCGGGCAGGAGAGTTTTGTGTTCTCCTCGTTG GCGGTGGCATCAACCGCTCGCCATGGAGAATCATCCCGAGTCTCCAACCGTGACACATCTTCATTCAACCACCCA GGCCTCCTCCACACGGCCACAGATTTCTCACGCATCGCCTCAAAAGTATCCAGCAACACCGAACCATGGCTAACA GGCTGGTACAAACTCACCAACAGCTCCAACATCAACCTAGACTACACGCCATCCCCAAAGACAATCGTCTATCGC GGCGCAGACGGCACCCACACAGAGAACTATCCCTCCCTGTACAAAGACATCGCAGCCGCCTACGCCATGGCCATC TACTGGAAAGTGACCGGCAACACGAGCTACGCCGACGTGGTCGTGAACATCCTCGATGAATGGAGCTCCACCCTA ACCGAAATCTCCGGAACAACAGACATGTACCTCGCCGCAGGCATCTACGGGTACGAATTCGCCAATGTTGCCGAG ATCATGCGCACGTATTCCGCATGGCCCAGTGCGAATCTGACCCGCTTTGCGGATATGATGGTCGATGTGTTCTAT CCCCTTAATCATGATTTCTTGCAGAATCATCATGGCGCGGCTGTTGATCATTACTGGGCGAATTGGGATTTGTGT AATATCGCCTCGGTTCTGTCCATTGGGGTGTTGACCGATAACGAAACCATGTTCGATGAGGGGTTGACTTATTTC AAGTCCGGAGCTGGGAATGGCCAGATTGAAAAGGCGATCTGGAAGCTGTATCAGGTTGATGGGGAGTCCTTGGGT CAGGGCCAGGAGGCCGGGCGGGATCAGGGCCACTCGATGTTGGATTTCGCCCTGCTTGGCCCTATCGCCCAGACG GCATACAATCAGGGAACGGACCTGTTTGAATATCTGGATAATCGCATTCTGGCTGGAGCGGAATACGTCGCCAAA TACAACCTCGGCAATGACGTTCCCTACACGACCTACAACAACAGCGACGACGTCAACCAGACGGTTATCAGCAAT TCCAGCCGCGGAGACATCAGACCCATCTGGGAGCTACTGTATAACCACTATGGTGTACTCAAGGGACTGGATGTC ACTTACACAAAGGAGTATCGCGATATGGTCGTTGAGGATGGCGATGGGGCTGAGGGCGGTGGTGGCGATTATGGA ACTACTAGTGGTGGGTATGACCAGTTGGGATGGGGGACGCTGATGTATACTCTTGAGTGA |
| Transcript | >Ani_SJS100_1|g748.t1 ATGGCCGACGCTGAGATTGGAAGTGGCGCCAAAGCGCCACTCAAGCGAGTGTGGTACCGCACTTCACTCTTCAAT GCTTGCGTGATCGGCGCTGTTGGTTTCCTCGCCCCCGGGCTATGGAACGCCATGAACTCCCTCGGAGCCGGAGGC GAGGAGAAGCCCTTTCTGGTGAATGCTGCCAATGCACTAGTTTTCGGGCTGATGGGCATTTTCTGCATCTTCGGC GCGCCCATTGCCAACCGCATCGGACTGAAATGGGCCCTTCTCCTCGGCGCCGCCGGCTACCCCGTCTACGCAGCC GGTCTCTACACCAACAACCGGTTCGGCAACGTCTGGCTCGTTCTGGTCGGTGCCGTGGCATGCGGCATCTCCGCA GGACTCTTCTGGGCCAGTGAAGGCGCCATCGCCATTGGATACCCAGAGCCATCGAAACGAGCCCGATACCTCAAC ATCTGGGTATGGTGGCGCACCCTCGGACCCATTATCGGGAACTCGATTGTCCTAGCCCTCAACATCAAGAACCAG GACAAAGGAAGTGTGGGATACTCTACCTACATTGTCTTCATCGTTCTACAATGTCTGGCTGTCCCCGTTGCGTTA CTTCTCACCCCGCCCGACAAAGTCCAACGCGCCGATGGCTCTCCAGTCATCCTTCGGGTCGAGGACTCCTGGAAG GCAGAATTTCAAGCACTCTGGAAAACATGCAAAAACCGCACCGTCATCCTTCTGCTCCCAATCTTCTGGGCTGTC TACTTCAATGAATACTCGGGTAACTTCGAAACTTATTACTTTGGAGTGCGAGCTCGTGCGCTTATCGCGTTCCTC TCCGACTGGGTTACGATTCTCGCTTCGCAGATCATCTCTCACTGGCTGGATTGGAAGCGTGTCGACGCTAAGAAG CGTCTCACGTACGGCTGGTACTGGGTGATCATTGTGCATGTGACGGCGTATATTCTTGGCTGGGTCGTGCAGGAG CAATATACATCCGCCCATAAAAAGAACCCTGATTTGGGGACGATGGATTATACCAGTCCTGGATTCGCTAAGGGC GCGTTTGTCCTTTTCATGTGGACCTTTGCTCAGCAGACGGGCCAGAATTGGCTGTATTATTTGGTGGGAAGCATG ACGGATAATATCGCCGAGTTGACCAGATTGACGGGTGTGTTGCGCGGGCAGGAGAGTTTTGTGTTCTCCTCGTTG GCGGTGGCATCAACCGCTCGCCATGGAGAATCATCCCGAGTCTCCAACCGTGACACATCTTCATTCAACCACCCA GGCCTCCTCCACACGGCCACAGATTTCTCACGCATCGCCTCAAAAGTATCCAGCAACACCGAACCATGGCTAACA GGCTGGTACAAACTCACCAACAGCTCCAACATCAACCTAGACTACACGCCATCCCCAAAGACAATCGTCTATCGC GGCGCAGACGGCACCCACACAGAGAACTATCCCTCCCTGTACAAAGACATCGCAGCCGCCTACGCCATGGCCATC TACTGGAAAGTGACCGGCAACACGAGCTACGCCGACGTGGTCGTGAACATCCTCGATGAATGGAGCTCCACCCTA ACCGAAATCTCCGGAACAACAGACATGTACCTCGCCGCAGGCATCTACGGGTACGAATTCGCCAATGTTGCCGAG ATCATGCGCACGTATTCCGCATGGCCCAGTGCGAATCTGACCCGCTTTGCGGATATGATGGTCGATGTGTTCTAT CCCCTTAATCATGATTTCTTGCAGAATCATCATGGCGCGGCTGTTGATCATTACTGGGCGAATTGGGATTTGTGT AATATCGCCTCGGTTCTGTCCATTGGGGTGTTGACCGATAACGAAACCATGTTCGATGAGGGGTTGACTTATTTC AAGTCCGGAGCTGGGAATGGCCAGATTGAAAAGGCGATCTGGAAGCTGTATCAGGTTGATGGGGAGTCCTTGGGT CAGGGCCAGGAGGCCGGGCGGGATCAGGGCCACTCGATGTTGGATTTCGCCCTGCTTGGCCCTATCGCCCAGACG GCATACAATCAGGGAACGGACCTGTTTGAATATCTGGATAATCGCATTCTGGCTGGAGCGGAATACGTCGCCAAA TACAACCTCGGCAATGACGTTCCCTACACGACCTACAACAACAGCGACGACGTCAACCAGACGGTTATCAGCAAT TCCAGCCGCGGAGACATCAGACCCATCTGGGAGCTACTGTATAACCACTATGGTGTACTCAAGGGACTGGATGTC ACTTACACAAAGGAGTATCGCGATATGGTCGTTGAGGATGGCGATGGGGCTGAGGGCGGTGGTGGCGATTATGGA ACTACTAGTGGTGGGTATGACCAGTTGGGATGGGGGACGCTGATGTATACTCTTGAGTGA |
| Gene | >Ani_SJS100_1|g748.t1 ATGGCCGACGCTGAGATTGGAAGTGGCGCCAAAGCGCCACTCAAGCGAGTGTGGTACCGCACTTCACTCTTCAAT GCTTGCGTGATCGGCGCTGTTGGTTTCCTCGCCCCCGGGCTATGGAACGCCATGAACTCCCTCGGAGCCGGAGGC GAGGAGAAGCCCTTTCTGGTGAATGCTGCCAATGCACTAGTTTTCGGGCTGATGGGCATTTTCTGCATCTTCGGC GCGCCCATTGCCAACCGCATCGGACTGAAATGGGCCCTTCTCCTCGGCGCCGCCGGCTACCCCGTCTACGCAGCC GGTCTCTACACCAACAACCGGTTCGGCAACGTCTGGCTCGTTCTGGTCGGTGCCGTGGCATGCGGCATCTCCGCA GGACTCTTCTGGGCCAGTGAAGGCGCCATCGCCATTGGATACCCAGAGCCATCGAAACGAGCCCGATACCTCAAC ATCTGGGTATGGTGGCGCACCCTCGGACCCATTATCGGGAACTCGATTGTCCTAGCCCTCAACATCAAGAACCAG GACAAAGGAAGTGTGGGATACTCTACCTACATTGTCTTCATCGTTCTACAATGTCTGGCTGTCCCCGTTGCGTTA CTTCTCACCCCGCCCGACAAAGTCCAACGCGCCGATGGCTCTCCAGTCATCCTTCGGGTCGAGGACTCCTGGAAG GCAGAATTTCAAGCACTCTGGAAAACATGCAAAAACCGCACCGTCATCCTTCTGCTCCCAATCTTCTGGGCTGTC TACTTCAATGAATACTCGGGTAACTTCGAAACTTATTACTTTGGAGTGCGAGCTCGTGCGCTTATCGCGTTCCTC TCCGACTGGGTTACGATTCTCGCTTCGCAGATCATCTCTCACTGGCTGGATTGGAAGCGTGTCGACGCTAAGAAG CGTCTCACGTACGGCTGGTACTGGGTGATCATTGTGCATGTGACGGCGTATATTCTTGGCTGGGTCGTGCAGGAG CAATATACATCCGCCCATAAAAAGAACCCTGATTTGGGGACGATGGATTATACCAGTCCTGGATTCGCTAAGGGC GCGTTTGTCCTTTTCATGTGGACCTTTGCTCAGCAGACGGGCCAGAATTGGCTGTATTATTTGGTGGGAAGCATG ACGGATAATATCGCCGAGTTGACCAGATTGACGGGTGTGTTGCGCGGGCAGGAGAGTTTTGGTGAGGCGGTTTCT TATGGGTTGAACACGAGGGATTGGTATGGTGGACGGGTGCCCATGGCCGTAAATACTATCTTGCTGGGTGAGTTG GATTGAATACTTGAATTTTGAAGACTTACTAACAGGTATTTCTAGGACTGTGTGTTATTCCGACGTGGATCGTTG TGAGGAATCATGATATGGAACCGACAGGCGAAAGGGAGTTGGAGGTGGATCGACGCCCCGTCGTGGACGAGAAGG GGGTGGTTGATTTGGAGGTGAAGGAAACAGGAGTTCATTGATCTATTTATAGCAGATCAGATTAGATAAACGTAA GAATTGTCTTTGATCATGCTATATACACTAATTTACAAAGCATTATCACCCTGACAGTGTAGTCCTGTGAGGAGA GATAGATCGGAGGAAATGTCGGCCAACGGCCGGGTCAAGTAACGGACCCAGCCCCGGGTTTGTACTCAGGGGCCG AAGCCGATCCTTCCTCCGCTTGCTTACGTCCTGTTCTCCACAGTGTCTGTCACACATAGATGATGGATGGACCCT GAACCTCCTATTCGATAGTATTTGCTCGATATGCATTGCGTGCCGGTCCATCTACCGGTCCGTTTGAACTACAAG CGGCAAACCCGCAGGGTTGATCTTAATTTCCCCAACTCAACGAACGTCAGACATGTCGGCTAATCTGCCGGCCAA TTGGCCGGGCCTTGATATATTAAAAGCAATCCCGACCAAGGACCCTTAACAACTAGAGAATGTCACAGAAGCAGA GATAAACATTGCATCTTAATCGAGTTCCTAAGTATGAGATTAACACTACCGGTAGTGTTCTCCTCGTTGGCGGTG GCATCAACCGCTCGCCATGGAGAATCATCCCGAGTCTCCAACCGTGACACATCTTCATTCAACCACCCAGGCCTC CTCCACACGGCCACAGATTTCTCACGCATCGCCTCAAAAGTATCCAGCAACACCGAACCATGGCTAACAGGCTGG TACAAACTCACCAACAGCTCCAACATCAACCTAGACTACACGCCATCCCCAAAGACAATCGTCTATCGCGGCGCA GACGGCACCCACACAGAGAACTATCCCTCCCTGTACAAAGACATCGCAGCCGCCTACGCCATGGCCATCTACTGG AAAGTGACCGGCAACACGAGCTACGCCGACGTGGTCGTGAACATCCTCGATGAATGGAGCTCCACCCTAACCGAA ATCTCCGGAACAACAGACATGTACCTCGCCGCAGGCATCTACGGGTACGAATTCGCCAATGTTGCCGAGATCATG CGCACGTATTCCGCATGGCCCAGTGCGAATCTGACCCGCTTTGCGGATATGATGGTCGATGTGTTCTATCCCCTT AATCATGATTTCTTGCAGAATCATCATGGCGCGGCTGTTGATCATTACTGGGCGAATTGGGATTTGTGTAATATC GCCTCGGTTCTGTCCATTGGGGTGTTGACCGATAACGAAACCATGTTCGATGAGGGGTTGACTTATTTCAAGTCC GGAGCTGGGAATGGCCAGATTGAAAAGGCGATCTGGAAGCTGTATCAGGTTGATGGGGAGTCCTTGGGTCAGGGC CAGGAGGCCGGGCGGGATCAGGGCCACTCGATGTTGGATTTCGCCCTGCTTGGCCCTATCGCCCAGACGGCATAC AATCAGGGAACGGACCTGTTTGAATATCTGGATAATCGCATTCTGGCTGGGTGAGTTACCTCCCATTCTTATACT TGATCATTACATTTTCCCTATACCCTTATCCCCAAACCTCTCAACATGGAACATACCGAAAATATAGAGAACTAA CCAATCGCAAGAGCGGAATACGTCGCCAAATACAACCTCGGCAATGACGTTCCCTACACGACCTACAACAACAGC GACGACGTCAACCAGACGGTTATCAGCAATTCCAGCCGCGGAGACATCAGACCCATCTGGGAGCTACTGTATAAC CACTATGGTGTACTCAAGGGACTGGATGTCACTTACACAAAGGAGTATCGCGATATGGTCGTTGAGGATGGCGAT GGGGCTGAGGGCGGTGGTGGCGATTATGGAACTACTAGTGGTGGGTATGACCAGTTGGGATGGGGGACGCTGATG TATACTCTTGAGTGA |