Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g7450.t1
Gene name
Locationscaffold_052:154336..155134
Strand-
Gene length (bp)798
Transcript length (bp)450
Coding sequence length (bp)450
Protein length (aa) 150

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00828 Ribosomal_L27A Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 5.5E-18 28 146

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 13 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g7450.t1
MPTRFSKTRKARGHVSAGYGRIGKHRKHPGGRGMAGGQHHHRTNLDKYHPGYFGKVGMRYFHKTQQQFWKPTINL
DKLWSLVPAEKRDAYLSGQKTDTAPVIDLLPLGYSKVLGKGRLPEVPIVVRARYFSRDAEEKIKAAGGVVELVA*
Coding >Ani_SJS100_1|g7450.t1
ATGCCTACCCGTTTCTCGAAGACAAGGAAAGCCCGCGGTCATGTCTCGGCCGGTTACGGTCGCATTGGCAAGCAC
CGTAAGCACCCCGGTGGTCGTGGTATGGCCGGTGGTCAGCACCACCACCGCACCAACCTCGACAAGTACCACCCC
GGTTACTTCGGTAAGGTCGGTATGAGGTACTTCCACAAGACCCAGCAGCAGTTCTGGAAGCCCACTATCAACCTT
GACAAGCTGTGGTCTCTCGTCCCCGCCGAGAAGCGTGACGCCTACCTGAGCGGCCAGAAGACCGACACCGCCCCC
GTCATCGACCTCCTTCCCCTCGGCTACTCCAAGGTTCTCGGCAAGGGCCGTCTCCCCGAGGTCCCCATCGTCGTC
CGCGCTCGCTACTTCAGCCGGGATGCTGAGGAGAAGATCAAGGCTGCCGGTGGTGTTGTTGAGCTCGTTGCTTAA
Transcript >Ani_SJS100_1|g7450.t1
ATGCCTACCCGTTTCTCGAAGACAAGGAAAGCCCGCGGTCATGTCTCGGCCGGTTACGGTCGCATTGGCAAGCAC
CGTAAGCACCCCGGTGGTCGTGGTATGGCCGGTGGTCAGCACCACCACCGCACCAACCTCGACAAGTACCACCCC
GGTTACTTCGGTAAGGTCGGTATGAGGTACTTCCACAAGACCCAGCAGCAGTTCTGGAAGCCCACTATCAACCTT
GACAAGCTGTGGTCTCTCGTCCCCGCCGAGAAGCGTGACGCCTACCTGAGCGGCCAGAAGACCGACACCGCCCCC
GTCATCGACCTCCTTCCCCTCGGCTACTCCAAGGTTCTCGGCAAGGGCCGTCTCCCCGAGGTCCCCATCGTCGTC
CGCGCTCGCTACTTCAGCCGGGATGCTGAGGAGAAGATCAAGGCTGCCGGTGGTGTTGTTGAGCTCGTTGCTTAA
Gene >Ani_SJS100_1|g7450.t1
ATGCCTACCCGTTTCTCGAAGACAAGGAAAGCGTGAGTCGCTTCAGTTCTCCCTTTCGCCTCCGGTGGTCGACCG
TCCCGTTTGTCGTGGTCAATTTGCGACAGGCTTGTGGCCTCATCCGACCACCTTCCGCCCCGTCTACCAGAACAA
CAAGAAAACTGACTTTTGTGTCCTCTTCCTTAGCCGCGGTCATGTCTCGGCCGGTTACGGTCGCATTGGCAAGCA
CCGTAAGCACCCCGGTGGTCGTGGTATGGCCGGTGGTCAGCACCACCACCGCACCAACCTCGACAAGTACCACCC
CGGTTACTTCGGTAAGGTCGGTATGAGGTACTTCCACAAGACCCAGCAGCAGTTCTGGAAGCCCACTATCAACCT
TGACAAGGTACGTTTAAAATCGACAATACGATTCCAATCGAGAAGAGAAGCAGAAGGATGAGAAAGCGCAAGGGG
TGGACGTTTTGTCATCACACGACGTGGAAGAAGAATAGGAGAGGGAATAGAACAGGAGCGCGAGAACACATGAGA
CTGGAATACGTTTTGAAGGATGTGGGTAGCTGATCAATTCTCTTTCCAATATAGCTGTGGTCTCTCGTCCCCGCC
GAGAAGCGTGACGCCTACCTGAGCGGCCAGAAGACCGACACCGCCCCCGTCATCGACCTCCTTCCCCTCGGCTAC
TCCAAGGTTCTCGGCAAGGGCCGTCTCCCCGAGGTCCCCATCGTCGTCCGCGCTCGCTACTTCAGCCGGGATGCT
GAGGAGAAGATCAAGGCTGCCGGTGGTGTTGTTGAGCTCGTTGCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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