© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g7442.t1 |
| Gene name | |
| Location | scaffold_052:130588..131806 |
| Strand | + |
| Gene length (bp) | 1218 |
| Transcript length (bp) | 864 |
| Coding sequence length (bp) | 864 |
| Protein length (aa) | 288 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05216 | UNC-50 | UNC-50 family | 2.2E-85 | 34 | 274 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 27 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 86 | 108 | 22 |
| 2 | 115 | 137 | 22 |
| 3 | 189 | 208 | 19 |
| 4 | 215 | 237 | 22 |
| 5 | 252 | 274 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g7442.t1 MNPHISVPRQHASPASFGGTTPASRGSSIRMPRFFKRLFKFPQMDFEMAIWEMTSLLIAPKKVFKSIYYHVKTKN TWHRPDPSFTYLLSFFLLLTALAWGLAYAPSFGAIVRLSLLFIFVHFIGSSLLVSTVGYFTIPRLFGPDGAAASL TGFRGGRGRRRGAAQGLFTQPGEKDQLEFGYCFDVSNRAFFPLYLHLYVVQFLLLPLLQRSPSNFLATFLGNTLY LSAITYYTYITFLGYNALPFLHNTELLLLPILAFAVLWLVSLIAGWGIVAQGRGVEGLFWGA* |
| Coding | >Ani_SJS100_1|g7442.t1 ATGAATCCTCACATCTCCGTCCCCCGCCAACATGCCAGCCCGGCCAGCTTCGGCGGCACCACCCCAGCAAGCCGC GGGTCTAGTATCCGCATGCCGCGATTCTTCAAGAGGTTGTTCAAGTTCCCGCAAATGGACTTTGAGATGGCGATC TGGGAAATGACATCTTTGTTGATTGCGCCAAAGAAGGTCTTCAAGTCAATCTATTACCATGTGAAAACGAAAAAC ACCTGGCACCGTCCGGATCCCTCGTTCACCTACCTCCTCTCTTTCTTCCTCCTGCTCACTGCCCTCGCCTGGGGC CTCGCGTATGCGCCCTCCTTCGGCGCCATTGTCCGGCTCTCGCTGCTCTTTATCTTCGTTCACTTCATCGGCTCG TCCTTGCTGGTCTCGACAGTCGGGTACTTTACGATCCCACGGTTATTCGGGCCCGATGGCGCAGCCGCATCGCTG ACGGGATTCCGCGGCGGTCGTGGACGGAGACGCGGCGCGGCGCAAGGCCTGTTCACGCAGCCGGGCGAGAAGGAC CAGCTTGAGTTCGGATACTGCTTTGATGTATCGAATCGGGCATTCTTCCCTCTGTATCTACATCTCTACGTGGTC CAGTTCCTGCTCCTCCCGCTGCTCCAGCGCAGCCCGAGCAACTTCCTGGCCACTTTCCTCGGAAACACCCTTTAC TTGTCGGCCATAACTTACTACACCTACATCACATTTCTCGGATACAATGCGCTTCCGTTCCTCCACAACACGGAG CTTCTGCTGCTCCCCATCCTGGCATTTGCAGTGCTGTGGCTGGTGAGCCTGATTGCGGGATGGGGGATAGTGGCG CAAGGCCGGGGAGTGGAAGGACTGTTCTGGGGCGCATGA |
| Transcript | >Ani_SJS100_1|g7442.t1 ATGAATCCTCACATCTCCGTCCCCCGCCAACATGCCAGCCCGGCCAGCTTCGGCGGCACCACCCCAGCAAGCCGC GGGTCTAGTATCCGCATGCCGCGATTCTTCAAGAGGTTGTTCAAGTTCCCGCAAATGGACTTTGAGATGGCGATC TGGGAAATGACATCTTTGTTGATTGCGCCAAAGAAGGTCTTCAAGTCAATCTATTACCATGTGAAAACGAAAAAC ACCTGGCACCGTCCGGATCCCTCGTTCACCTACCTCCTCTCTTTCTTCCTCCTGCTCACTGCCCTCGCCTGGGGC CTCGCGTATGCGCCCTCCTTCGGCGCCATTGTCCGGCTCTCGCTGCTCTTTATCTTCGTTCACTTCATCGGCTCG TCCTTGCTGGTCTCGACAGTCGGGTACTTTACGATCCCACGGTTATTCGGGCCCGATGGCGCAGCCGCATCGCTG ACGGGATTCCGCGGCGGTCGTGGACGGAGACGCGGCGCGGCGCAAGGCCTGTTCACGCAGCCGGGCGAGAAGGAC CAGCTTGAGTTCGGATACTGCTTTGATGTATCGAATCGGGCATTCTTCCCTCTGTATCTACATCTCTACGTGGTC CAGTTCCTGCTCCTCCCGCTGCTCCAGCGCAGCCCGAGCAACTTCCTGGCCACTTTCCTCGGAAACACCCTTTAC TTGTCGGCCATAACTTACTACACCTACATCACATTTCTCGGATACAATGCGCTTCCGTTCCTCCACAACACGGAG CTTCTGCTGCTCCCCATCCTGGCATTTGCAGTGCTGTGGCTGGTGAGCCTGATTGCGGGATGGGGGATAGTGGCG CAAGGCCGGGGAGTGGAAGGACTGTTCTGGGGCGCATGA |
| Gene | >Ani_SJS100_1|g7442.t1 ATGAATCCTCACATCTCCGTCCCCCGCCAACATGCCAGCCCGGCCAGCTTCGGCGGCACCACCCCAGCAAGCCGC GGGTCTAGTATCCGCATGCCGCGATTCTTCAAGAGGTAGGCTACTTCCACCCCCTTCTGGGACTTTTGGGGTCAT TGGAGGGCATGATACGTCTATAAAACGGACATCCATGGCCTTTTCTGATCCTCATCGACCGGCTACTGATGCCCC TGGCTGGCTTACAGGTTGTTCAAGTTCCCGCAAATGGACTTTGAGATGGCGATCTGGGAAATGACATCTTTGTTG ATTGCGCCAAAGAAGGTCTTCAAGTCAATCTATTACCATGTGAGTTGATAACGGCCTCCTGCTCCATAGTGCGCA TCTGGTTATGCTGACCCAAGCTTCACCGCAGAAACGTATGTCATCGCCTGACACCGCACCTTGCCGTTCTGGCCC GCTTTTCCGGAATCCTACACACACCCGTCGATTCCTATACTGATGGCCTCGTACAGAAACGAAAAACACCTGGCA CCGTCCGGATCCCTCGTTCACCTACCTCCTCTCTTTCTTCCTCCTGCTCACTGCCCTCGCCTGGGGCCTCGCGTA TGCGCCCTCCTTCGGCGCCATTGTCCGGCTCTCGCTGCTCTTTATCTTCGTTCACTTCATCGGCTCGTCCTTGCT GGTCTCGACAGTCGGGTACTTTACGATCCCACGGTTATTCGGGCCCGATGGCGCAGCCGCATCGCTGACGGGATT CCGCGGCGGTCGTGGACGGAGACGCGGCGCGGCGCAAGGCCTGTTCACGCAGCCGGGCGAGAAGGACCAGCTTGA GTTCGGATACTGCTTTGATGTAAGTGACACACTTTCACAGCATACTGGGACATAGCAGCACCGGCTAATCGCAGA CATCAGGTATCGAATCGGGCATTCTTCCCTCTGTATCTACATCTCTACGTGGTCCAGTTCCTGCTCCTCCCGCTG CTCCAGCGCAGCCCGAGCAACTTCCTGGCCACTTTCCTCGGAAACACCCTTTACTTGTCGGCCATAACTTACTAC ACCTACATCACATTTCTCGGATACAATGCGCTTCCGTTCCTCCACAACACGGAGCTTCTGCTGCTCCCCATCCTG GCATTTGCAGTGCTGTGGCTGGTGAGCCTGATTGCGGGATGGGGGATAGTGGCGCAAGGCCGGGGAGTGGAAGGA CTGTTCTGGGGCGCATGA |