© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g744.t1 |
| Gene name | |
| Location | scaffold_002:939060..940137 |
| Strand | - |
| Gene length (bp) | 1077 |
| Transcript length (bp) | 957 |
| Coding sequence length (bp) | 957 |
| Protein length (aa) | 319 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF09130 | DUF1932 | Domain of unknown function (DUF1932) | 6.1E-26 | 212 | 282 |
| PF03446 | NAD_binding_2 | NAD binding domain of 6-phosphogluconate dehydrogenase | 1.2E-07 | 8 | 139 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0050661 | NADP binding | Yes |
| GO:0000166 | nucleotide binding | No |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0036094 | small molecule binding | No |
| Orthofinder run ID | 3 |
| Orthogroup | 7670 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g744.t1 MSYPLEAIGIISIGEMGLGIAQLLIAHHYRVLTFAADRSDATQRRAWQAGIELRPSMQDLVDQSDCLLSIVPPRD ALTTAHRIVEASSARPAVRDTPLWVIDLNAVSPQTAREIESVITEASASSSHLRYIDGGIVGGPPRPLQPTNPNE PSWHCPSLIVSGPEKLPDEKLSRTLNIKHISDKIGVATGLKMCFASLTKGFFALAIQSFTTAHSLGVLPHLKDLM EEYNPATLRIAEKGVVGMPPKAYRWVREMREIGDTMRDDGGFESDLFYAVAQVYQSVADDPILGQEKPDDRQRGQ TVEDVVECLDKSLKVKKD* |
| Coding | >Ani_SJS100_1|g744.t1 ATGTCTTATCCCCTCGAAGCAATCGGCATCATCTCCATCGGAGAGATGGGTCTGGGCATTGCCCAGCTCCTAATC GCCCACCACTACCGAGTCCTAACCTTTGCGGCCGATCGGAGCGACGCAACTCAACGCCGAGCATGGCAAGCAGGT ATCGAGCTCCGCCCCTCAATGCAAGACCTCGTCGACCAAAGCGACTGCCTCCTCTCCATCGTCCCACCACGGGAC GCACTCACAACCGCCCATCGCATTGTGGAAGCATCGTCCGCGCGGCCCGCGGTCCGCGATACCCCGCTATGGGTG ATCGATCTGAACGCCGTGTCACCACAGACAGCGCGCGAGATAGAGTCCGTGATTACTGAAGCGTCAGCATCATCA TCGCACCTCCGCTACATCGACGGAGGCATCGTGGGCGGTCCACCCAGGCCATTGCAGCCAACCAACCCAAATGAA CCATCCTGGCATTGTCCCAGCTTGATCGTCTCTGGCCCCGAGAAGCTCCCAGACGAGAAGTTATCCCGCACGCTG AACATCAAACACATCTCGGACAAGATCGGCGTAGCGACCGGGTTGAAGATGTGCTTTGCGTCTCTGACGAAGGGG TTTTTCGCGTTGGCTATTCAGTCCTTCACTACGGCCCATTCGCTGGGTGTGCTCCCGCATTTGAAGGACCTGATG GAGGAATATAACCCGGCGACGCTACGCATAGCGGAGAAGGGTGTGGTGGGGATGCCGCCGAAGGCGTATCGGTGG GTCAGGGAGATGAGAGAGATCGGGGATACAATGAGGGATGATGGGGGGTTTGAGAGTGATCTATTCTACGCCGTG GCCCAAGTGTATCAATCCGTCGCGGACGATCCAATCCTGGGGCAAGAGAAGCCGGATGATCGACAGCGGGGACAG ACGGTCGAGGATGTGGTTGAATGTTTGGACAAGAGCCTGAAGGTGAAGAAGGATTGA |
| Transcript | >Ani_SJS100_1|g744.t1 ATGTCTTATCCCCTCGAAGCAATCGGCATCATCTCCATCGGAGAGATGGGTCTGGGCATTGCCCAGCTCCTAATC GCCCACCACTACCGAGTCCTAACCTTTGCGGCCGATCGGAGCGACGCAACTCAACGCCGAGCATGGCAAGCAGGT ATCGAGCTCCGCCCCTCAATGCAAGACCTCGTCGACCAAAGCGACTGCCTCCTCTCCATCGTCCCACCACGGGAC GCACTCACAACCGCCCATCGCATTGTGGAAGCATCGTCCGCGCGGCCCGCGGTCCGCGATACCCCGCTATGGGTG ATCGATCTGAACGCCGTGTCACCACAGACAGCGCGCGAGATAGAGTCCGTGATTACTGAAGCGTCAGCATCATCA TCGCACCTCCGCTACATCGACGGAGGCATCGTGGGCGGTCCACCCAGGCCATTGCAGCCAACCAACCCAAATGAA CCATCCTGGCATTGTCCCAGCTTGATCGTCTCTGGCCCCGAGAAGCTCCCAGACGAGAAGTTATCCCGCACGCTG AACATCAAACACATCTCGGACAAGATCGGCGTAGCGACCGGGTTGAAGATGTGCTTTGCGTCTCTGACGAAGGGG TTTTTCGCGTTGGCTATTCAGTCCTTCACTACGGCCCATTCGCTGGGTGTGCTCCCGCATTTGAAGGACCTGATG GAGGAATATAACCCGGCGACGCTACGCATAGCGGAGAAGGGTGTGGTGGGGATGCCGCCGAAGGCGTATCGGTGG GTCAGGGAGATGAGAGAGATCGGGGATACAATGAGGGATGATGGGGGGTTTGAGAGTGATCTATTCTACGCCGTG GCCCAAGTGTATCAATCCGTCGCGGACGATCCAATCCTGGGGCAAGAGAAGCCGGATGATCGACAGCGGGGACAG ACGGTCGAGGATGTGGTTGAATGTTTGGACAAGAGCCTGAAGGTGAAGAAGGATTGA |
| Gene | >Ani_SJS100_1|g744.t1 ATGTCTTATCCCCTCGAAGCAATCGGCATCATCTCCATCGGAGAGATGGGTCTGGGCATTGCCCAGCTCCTAATC GCCCACCACTACCGAGTCCTAACCTTTGCGGCCGATCGGAGGTATAATCAATCTCCTCAATCCAGATGTCATCGC AGCTAACCACATATTCATAACAGCGACGCAACTCAACGCCGAGCATGGCAAGCAGGTATCGAGCTCCGCCCCTCA ATGCAAGACCTCGTCGACCAAAGCGACTGCCTCCTCTCCATCGTCCCACCACGGGACGCACTCACAACCGCCCAT CGCATTGTGGAAGCATCGTCCGCGCGGCCCGCGGTCCGCGATACCCCGCTATGGGTGATCGATCTGAACGCCGTG TCACCACAGACAGCGCGCGAGATAGAGTCCGTGATTACTGAAGCGTCAGCATCATCATCGCACCTCCGCTACATC GACGGAGGCATCGTGGGCGGTCCACCCAGGCCATTGCAGCCAACCAACCCAAATGAACCATCCTGGCATTGTCCC AGCTTGATCGTCTCTGGCCCCGAGAAGCTCCCAGACGAGAAGTTATCCCGCACGCTGAACATCAAACACATCTCG GACAAGATCGGCGTAGCGACCGGGTTGAAGATGTGCTTTGCGTCTCTGACGAAGGGGTTTTTCGCGTTGGCTATT CAGTCCTTCACTACGGCCCATTCGCTGGGTGTGCTCCCGCATTTGAAGGACCTGATGGAGGAATATAACCCGGCG ACGCTACGCATAGCGGAGAAGGGTGTGGTGGGGATGCCGCCGAAGGCGTATCGGTGGGTCAGGGAGATGAGAGAG ATCGGGGATACAATGAGGGATGATGGGGGGTTTGAGAGTGATCTGTACGTGTGCCCAATATATCCCCACTCGTGG TGATCATGATGCTAACCTGTGTGTGTTGATAGATTCTACGCCGTGGCCCAAGTGTATCAATCCGTCGCGGACGAT CCAATCCTGGGGCAAGAGAAGCCGGATGATCGACAGCGGGGACAGACGGTCGAGGATGTGGTTGAATGTTTGGAC AAGAGCCTGAAGGTGAAGAAGGATTGA |