Protein ID | Ani_SJS100_1|g7404.t1 |
Gene name | |
Location | scaffold_052:7797..9283 |
Strand | - |
Gene length (bp) | 1486 |
Transcript length (bp) | 1188 |
Coding sequence length (bp) | 1188 |
Protein length (aa) | 396 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00752 | XPG_N | XPG N-terminal domain | 1.2E-30 | 1 | 107 |
PF00867 | XPG_I | XPG I-region | 7.6E-30 | 149 | 233 |
GO Term | Description | Terminal node |
---|---|---|
GO:0004518 | nuclease activity | Yes |
GO:0016788 | hydrolase activity, acting on ester bonds | No |
GO:0003824 | catalytic activity | No |
GO:0016787 | hydrolase activity | No |
GO:0003674 | molecular_function | No |
Orthofinder run ID | 3 |
Orthogroup | 7635 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g7404.t1 MGIKQLYQVISENAPDAIKAGDIKNHFGRKVAIDASMSIYSFLIAVRSEGQQLMSDTGETTSHLMGMFYRTLRMV DNGIKPLYVFDGAPPKLKSGELAKRFARKSEATEAHEEAKETGTAEDVEKFSRRTVRVTREHNAECKKLLKLMGI PYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCFETPILLRHLTFSEQRKEPIQEIHLNRALEGLGMDRKQFID LCILLGCDYLEPIPKVGPNTALKLIRDHGSLEKVLEFMENDPKKKFVVPEDWPYEDARELFLNPDVRDANDPECD FKWEAPDVPGLVDFLVKDKGFNEDRVKNGAARLQKNLKSAQQSRLEGFFKPVARTDEEKASLKRKHDEKIQEQKK KKKEEAKAKKEAKSRPRGAG* |
Coding | >Ani_SJS100_1|g7404.t1 ATGGGTATTAAACAACTGTATCAGGTGATTTCAGAAAATGCCCCAGATGCCATCAAGGCAGGGGACATTAAGAAC CACTTTGGCCGCAAGGTCGCCATAGATGCCTCCATGAGTATTTACAGTTTCCTCATTGCAGTCCGTTCCGAAGGT CAGCAGCTTATGAGCGACACCGGAGAGACAACGTCGCATTTGATGGGCATGTTCTACCGCACTCTGCGCATGGTC GACAATGGCATCAAGCCTCTGTATGTATTTGACGGAGCTCCCCCAAAGCTCAAGTCCGGCGAACTGGCCAAGCGA TTTGCTCGGAAGAGCGAAGCCACCGAGGCTCACGAGGAGGCCAAGGAAACCGGTACGGCGGAAGACGTTGAGAAA TTCTCGCGACGCACAGTACGAGTCACCAGGGAGCACAACGCAGAATGTAAGAAGCTTTTGAAGTTGATGGGCATT CCGTACATCGATGCCCCCACAGAAGCCGAGGCGCAGTGCGCGGTTCTCGCGCGCGCTGGAAAGGTCTATGCAGCT GCTTCGGAGGATATGGACACGCTATGCTTTGAGACACCAATTCTTCTGCGCCACCTTACGTTCAGTGAACAAAGA AAGGAACCCATTCAGGAGATCCATTTGAATCGTGCGCTGGAGGGGCTGGGTATGGACCGCAAGCAGTTCATTGAT CTTTGTATTTTGCTGGGTTGTGATTATCTGGAGCCGATCCCCAAGGTCGGGCCTAACACGGCGCTGAAGCTAATC CGTGATCACGGAAGTCTGGAGAAGGTGCTTGAGTTTATGGAGAACGATCCGAAGAAGAAGTTTGTCGTCCCTGAG GATTGGCCCTATGAGGATGCCAGAGAGCTTTTCCTGAACCCAGATGTGAGGGACGCCAATGACCCCGAATGCGAC TTCAAATGGGAAGCGCCCGACGTGCCCGGTCTGGTAGACTTCCTGGTCAAAGACAAGGGCTTCAACGAGGACCGC GTCAAGAACGGTGCTGCCCGCTTGCAAAAGAACCTGAAATCTGCTCAGCAATCCCGCCTAGAGGGCTTTTTCAAG CCGGTCGCCCGCACGGATGAAGAGAAGGCGAGCCTAAAGCGCAAGCACGACGAAAAGATTCAGGAGCAGAAAAAG AAGAAGAAGGAAGAGGCCAAGGCCAAGAAAGAGGCCAAGTCACGGCCTCGCGGTGCTGGTTGA |
Transcript | >Ani_SJS100_1|g7404.t1 ATGGGTATTAAACAACTGTATCAGGTGATTTCAGAAAATGCCCCAGATGCCATCAAGGCAGGGGACATTAAGAAC CACTTTGGCCGCAAGGTCGCCATAGATGCCTCCATGAGTATTTACAGTTTCCTCATTGCAGTCCGTTCCGAAGGT CAGCAGCTTATGAGCGACACCGGAGAGACAACGTCGCATTTGATGGGCATGTTCTACCGCACTCTGCGCATGGTC GACAATGGCATCAAGCCTCTGTATGTATTTGACGGAGCTCCCCCAAAGCTCAAGTCCGGCGAACTGGCCAAGCGA TTTGCTCGGAAGAGCGAAGCCACCGAGGCTCACGAGGAGGCCAAGGAAACCGGTACGGCGGAAGACGTTGAGAAA TTCTCGCGACGCACAGTACGAGTCACCAGGGAGCACAACGCAGAATGTAAGAAGCTTTTGAAGTTGATGGGCATT CCGTACATCGATGCCCCCACAGAAGCCGAGGCGCAGTGCGCGGTTCTCGCGCGCGCTGGAAAGGTCTATGCAGCT GCTTCGGAGGATATGGACACGCTATGCTTTGAGACACCAATTCTTCTGCGCCACCTTACGTTCAGTGAACAAAGA AAGGAACCCATTCAGGAGATCCATTTGAATCGTGCGCTGGAGGGGCTGGGTATGGACCGCAAGCAGTTCATTGAT CTTTGTATTTTGCTGGGTTGTGATTATCTGGAGCCGATCCCCAAGGTCGGGCCTAACACGGCGCTGAAGCTAATC CGTGATCACGGAAGTCTGGAGAAGGTGCTTGAGTTTATGGAGAACGATCCGAAGAAGAAGTTTGTCGTCCCTGAG GATTGGCCCTATGAGGATGCCAGAGAGCTTTTCCTGAACCCAGATGTGAGGGACGCCAATGACCCCGAATGCGAC TTCAAATGGGAAGCGCCCGACGTGCCCGGTCTGGTAGACTTCCTGGTCAAAGACAAGGGCTTCAACGAGGACCGC GTCAAGAACGGTGCTGCCCGCTTGCAAAAGAACCTGAAATCTGCTCAGCAATCCCGCCTAGAGGGCTTTTTCAAG CCGGTCGCCCGCACGGATGAAGAGAAGGCGAGCCTAAAGCGCAAGCACGACGAAAAGATTCAGGAGCAGAAAAAG AAGAAGAAGGAAGAGGCCAAGGCCAAGAAAGAGGCCAAGTCACGGCCTCGCGGTGCTGGTTGA |
Gene | >Ani_SJS100_1|g7404.t1 ATGGGTATTAAACGTGAGTAATCCCAATTGATATCACCCCTCCGCAAAACCGCTCTGTCGCAGCGCATTCATCCA TCCTCAGCAGCCCATGGAAGCTGACCACGCTCAGAACTGTATCAGGTGATTTCAGAAAATGCCCCAGATGCCATC AAGGCAGGGGACATTAAGAACCACTTTGGCCGCAAGGTCGCCATAGTATGTTAAGCGTCCCCCCCCCCCATCAAA TTACGCGGTTGCTCTCAGTGAGCTAGCTGTTCGCGTTTCGGACAGAGCTGACGATATTGGATTATAGGATGCGTA GGCTTTCACTACCCCGGTTATCTCGTTCTCGTCCACTAACGGTCATATAGCTCCATGAGTATTTACAGTTTCCTC ATTGCAGTCCGTTCCGAAGGTCAGCAGCTTATGAGCGACACCGGAGAGACAACGTCGCATTTGATGGGCATGTTC TACCGCACTCTGCGCATGGTCGACAATGGCATCAAGCCTCTGTATGTATTTGACGGAGCTCCCCCAAAGCTCAAG TCCGGCGAACTGGCCAAGCGATTTGCTCGGAAGAGCGAAGCCACCGAGGCTCACGAGGAGGCCAAGGAAACCGGT ACGGCGGAAGACGTTGAGAAATTCTCGCGACGCACAGTACGAGTCACCAGGGAGCACAACGCAGAATGTAAGAAG CTTTTGAAGTTGATGGGCATTCCGTACATCGATGCCCCCACAGAAGCCGAGGCGCAGTGCGCGGTTCTCGCGCGC GCTGGAAAGGTCTATGCAGCTGCTTCGGAGGATATGGACACGCTATGCTTTGAGACACCAATTCTTCTGCGCCAC CTTACGTTCAGTGAACAAAGAAAGGAACCCATTCAGGAGATCCATTTGAATCGTGCGCTGGAGGGGCTGGGTATG GACCGCAAGCAGGTATGTTCTTTGGGGTACCTACGTTTCAAGGAAGCTTACTGATGCAACATAGTTCATTGATCT TTGTATTTTGCTGGGTTGTGATTATCTGGAGCCGATCCCCAAGGTCGGGCCTAACACGGCGCTGAAGCTAATCCG TGATCACGGAAGTCTGGAGAAGGTGCTTGAGTTTATGGAGAACGATCCGAAGAAGAAGTTTGTCGTCCCTGAGGA TTGGCCCTATGAGGATGCCAGAGAGCTTTTCCTGAACCCAGATGTGAGGGACGCCAATGACCCCGAATGCGACTT CAAATGGGAAGCGCCCGACGTGCCCGGTCTGGTAGACTTCCTGGTCAAAGACAAGGGCTTCAACGAGGACCGCGT CAAGAACGGTGCTGCCCGCTTGCAAAAGAACCTGAAATCTGCTCAGCAATCCCGCCTAGAGGGCTTTTTCAAGCC GGTCGCCCGCACGGATGAAGAGAAGGCGAGCCTAAAGCGCAAGCACGACGAAAAGATTCAGGAGCAGAAAAAGAA GAAGAAGGAAGAGGCCAAGGCCAAGAAAGAGGCCAAGTCACGGCCTCGCGGTGCTGGTTGA |