© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g7371.t1 |
| Gene name | |
| Location | scaffold_051:154367..155927 |
| Strand | - |
| Gene length (bp) | 1560 |
| Transcript length (bp) | 1194 |
| Coding sequence length (bp) | 1194 |
| Protein length (aa) | 398 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07992 | Pyr_redox_2 | Pyridine nucleotide-disulphide oxidoreductase | 8.2E-32 | 7 | 317 |
| PF00070 | Pyr_redox | Pyridine nucleotide-disulphide oxidoreductase | 2.1E-12 | 150 | 214 |
| PF13738 | Pyr_redox_3 | Pyridine nucleotide-disulphide oxidoreductase | 1.5E-08 | 110 | 258 |
| PF13434 | Lys_Orn_oxgnase | L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase | 6.6E-05 | 105 | 187 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 23 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g7371.t1 MAASSLKNVIVVGGSYVGKGVAQELARVVPNTHRVLLIEPHSHFHHLFAFPRFAVVPGHEQKAFIPYSRLYSSAP NATQHAVVQARVLSVQPQHVNLDRDWQGLKQIPFEYLVVATGTRLAQPAAMTDDDKPSSVVYLQKHQADVKKAKS VVIVGGGAVGVQMATDMKELYPEKEITVVQSRDQLMPQFHRGLHEIVKKRFEELGINLVTGARIVVPETGFPNNG TPFTVQLNNGTELTTEFVILATGQKPNNDLIKTLPASSPDSLINPDNGFIRIRPTMQFQDPKYPNLFALGDIADT GLRKAARPGGPQAATVAKNIQAMIEGKKPEEAFPPFPTAIHITLGLKYNIVFRNPNPAEGQNEPVVKESWDSQED MGVDRWWQRMGFEESGAPQYHL* |
| Coding | >Ani_SJS100_1|g7371.t1 ATGGCCGCATCTTCGCTGAAGAATGTCATCGTCGTGGGCGGTTCCTATGTCGGAAAGGGAGTCGCACAGGAGCTT GCGCGGGTTGTGCCCAACACGCATAGAGTCCTCCTGATCGAACCCCACAGTCACTTCCACCACCTCTTCGCATTT CCCCGATTCGCCGTCGTCCCTGGCCACGAACAAAAGGCCTTCATTCCCTACTCCCGCCTCTACTCCTCCGCCCCC AACGCCACACAACATGCAGTCGTCCAGGCGCGCGTTCTCTCCGTACAGCCCCAACACGTCAATCTCGATCGTGAC TGGCAAGGCCTGAAGCAGATTCCATTCGAGTACCTCGTTGTTGCGACAGGCACGCGTCTCGCCCAGCCTGCAGCC ATGACAGACGACGACAAGCCGTCCTCCGTTGTCTACCTCCAAAAACACCAAGCCGACGTCAAGAAAGCCAAGTCT GTAGTAATCGTGGGCGGTGGAGCCGTCGGCGTGCAGATGGCCACCGACATGAAGGAATTATACCCAGAGAAGGAA ATTACCGTGGTGCAGTCGCGCGACCAATTGATGCCCCAATTCCACCGTGGTCTGCATGAAATCGTTAAGAAGCGC TTCGAAGAGCTCGGTATCAACCTGGTTACCGGCGCCCGCATCGTCGTCCCCGAAACCGGCTTCCCTAACAACGGC ACGCCCTTCACCGTCCAACTGAACAACGGCACCGAACTCACAACCGAGTTCGTCATCCTTGCCACTGGCCAAAAA CCCAACAACGACCTGATCAAGACTCTCCCCGCGTCTTCTCCCGATTCTCTCATCAACCCTGACAACGGCTTCATT CGTATCCGTCCCACCATGCAATTCCAGGACCCGAAGTACCCGAACCTCTTTGCGCTGGGCGATATCGCTGATACT GGCCTGCGCAAGGCCGCAAGACCCGGCGGTCCCCAGGCCGCGACCGTGGCGAAGAATATCCAGGCGATGATTGAG GGGAAGAAGCCGGAGGAGGCGTTCCCGCCGTTCCCGACGGCGATTCATATTACGTTGGGATTGAAATATAACATT GTTTTCCGGAATCCTAACCCGGCCGAGGGTCAGAATGAGCCTGTCGTTAAGGAGTCTTGGGACTCGCAAGAAGAC ATGGGTGTTGATCGCTGGTGGCAGCGTATGGGATTTGAGGAAAGCGGCGCCCCTCAGTACCATTTGTAA |
| Transcript | >Ani_SJS100_1|g7371.t1 ATGGCCGCATCTTCGCTGAAGAATGTCATCGTCGTGGGCGGTTCCTATGTCGGAAAGGGAGTCGCACAGGAGCTT GCGCGGGTTGTGCCCAACACGCATAGAGTCCTCCTGATCGAACCCCACAGTCACTTCCACCACCTCTTCGCATTT CCCCGATTCGCCGTCGTCCCTGGCCACGAACAAAAGGCCTTCATTCCCTACTCCCGCCTCTACTCCTCCGCCCCC AACGCCACACAACATGCAGTCGTCCAGGCGCGCGTTCTCTCCGTACAGCCCCAACACGTCAATCTCGATCGTGAC TGGCAAGGCCTGAAGCAGATTCCATTCGAGTACCTCGTTGTTGCGACAGGCACGCGTCTCGCCCAGCCTGCAGCC ATGACAGACGACGACAAGCCGTCCTCCGTTGTCTACCTCCAAAAACACCAAGCCGACGTCAAGAAAGCCAAGTCT GTAGTAATCGTGGGCGGTGGAGCCGTCGGCGTGCAGATGGCCACCGACATGAAGGAATTATACCCAGAGAAGGAA ATTACCGTGGTGCAGTCGCGCGACCAATTGATGCCCCAATTCCACCGTGGTCTGCATGAAATCGTTAAGAAGCGC TTCGAAGAGCTCGGTATCAACCTGGTTACCGGCGCCCGCATCGTCGTCCCCGAAACCGGCTTCCCTAACAACGGC ACGCCCTTCACCGTCCAACTGAACAACGGCACCGAACTCACAACCGAGTTCGTCATCCTTGCCACTGGCCAAAAA CCCAACAACGACCTGATCAAGACTCTCCCCGCGTCTTCTCCCGATTCTCTCATCAACCCTGACAACGGCTTCATT CGTATCCGTCCCACCATGCAATTCCAGGACCCGAAGTACCCGAACCTCTTTGCGCTGGGCGATATCGCTGATACT GGCCTGCGCAAGGCCGCAAGACCCGGCGGTCCCCAGGCCGCGACCGTGGCGAAGAATATCCAGGCGATGATTGAG GGGAAGAAGCCGGAGGAGGCGTTCCCGCCGTTCCCGACGGCGATTCATATTACGTTGGGATTGAAATATAACATT GTTTTCCGGAATCCTAACCCGGCCGAGGGTCAGAATGAGCCTGTCGTTAAGGAGTCTTGGGACTCGCAAGAAGAC ATGGGTGTTGATCGCTGGTGGCAGCGTATGGGATTTGAGGAAAGCGGCGCCCCTCAGTACCATTTGTAA |
| Gene | >Ani_SJS100_1|g7371.t1 ATGGCCGCATCTTCGCTGAAGAATGTCATCGTCGTGGGCGGTTCCTATGTCGGAAAGGTAATTCCACGCGCAACT CTCAGTTGTAAATGCAGAAGCATGACTGACAGCAAGTTCAGGGAGTCGCACAGGAGCTTGCGCGGGTTGTGCCCA ACACGCATAGAGTATGTCCTACCCACTGCCCAGCTATCCTGGTCACCAGACTAACCTACGTCCGCAGGTCCTCCT GATCGAACCCCACAGTCACTTCCACCACCTCTTCGCATTTGTATGTGACAACACCGTCCTACTGGCCCATATATC GCTATAGACACAAACTAATCCGCACCCCAGCCCCGATTCGCCGTCGTCCCTGGCCACGAACAAAAGGCCTTCATT CCCTACTCCCGCCTCTACTCCTCCGCCCCCAACGCCACACAACATGCAGTCGTCCAGGCGCGCGTTCTCTCCGTA CAGCCCCAACACGTCAATCTCGATCGTGACTGGCAAGGCCTGAAGCAGATTCCATTCGAGTACCTCGTTGTTGCG ACAGGCACGCGTCTCGCCCAGCCTGCAGCCATGACAGACGACGACAAGCCGTCCTCCGTTGTCTACCTCCAAAAA CACCAAGCCGACGTCAAGAAAGCCAAGTCTGTAGTAATCGTGGGCGGTGGAGCCGTCGGCGTGCAGATGGCCACC GACATGAAGGAATTATACCCAGAGAAGGAAATTACCGTGGTGCAGTCGCGCGACCAATTGATGCCCCAATTCCAC CGTGGTCTGCATGAAATCGTTAAGAAGCGCTTCGAAGAGCTCGGTATCAAGTTAGTTTCACTTCTCCCCCTTATC TATCAGATCATCCCAACTAATCTACTTCAGCCTGGTTACCGGCGCCCGCATCGTCGTCCCCGAAACCGGCTTCCC TAACAACGGCACGCCCTTCACCGTCCAACTGAACAACGGCACCGAACTCACAACCGAGTTCGTCATCCTTGCCAC TGGCCAAAAACCCAACAACGACCTGATCAAGACTCTCCCCGCGTCTTCTCCCGATTCTCTCATCAACCCTGACAA CGGCTTCATTCGTATCCGTCCCACCATGCAATTCCAGGACCCGAAGTACCCGAACCTCTTTGCGCTGGGCGATAT CGCTGATACTGGCCTGCGCAAGGCCGCAAGACCCGGCGGTCCCCAGGCCGCGACCGTGGCGAAGAATATCCAGGC GATGATTGAGGGGAAGAAGCCGGAGGAGGCGTTCCCGCCGTTCCCGACGGCGATTCATATTACGTTGGGATTGGT AAGATTTTTTTGTTTTATTTATTTGTCTTCCCGATATGGAGGGATGCTAATGGTCTGGTTGTACAGAAATATAAC ATTGTTTTCCGGAATCCTAACCCGGCCGAGGGTCAGAATGAGCCTGTCGTTAAGGAGTCTTGGGAGTAAGTTCCT CAATTCTGCAACTGTTATAAATTTTCGTGGAATGCAACCTAACAATTTGGCAGCTCGCAAGAAGACATGGGTGTT GATCGCTGGTGGCAGCGTATGGGATTTGAGGAAAGCGGCGCCCCTCAGTACCATTTGTAA |