Protein ID | Ani_SJS100_1|g7322.t1 |
Gene name | |
Location | scaffold_050:233445..235267 |
Strand | - |
Gene length (bp) | 1822 |
Transcript length (bp) | 1665 |
Coding sequence length (bp) | 1665 |
Protein length (aa) | 555 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13639 | zf-RING_2 | Ring finger domain | 4.8E-13 | 386 | 429 |
PF17123 | zf-RING_11 | RING-like zinc finger | 2.2E-10 | 387 | 414 |
PF13923 | zf-C3HC4_2 | Zinc finger, C3HC4 type (RING finger) | 8.5E-08 | 387 | 428 |
PF00097 | zf-C3HC4 | Zinc finger, C3HC4 type (RING finger) | 2.0E-07 | 387 | 428 |
GO Term | Description | Terminal node |
---|---|---|
GO:0046872 | metal ion binding | Yes |
GO:0043169 | cation binding | No |
GO:0005488 | binding | No |
GO:0043167 | ion binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 28 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 5 | 22 | 17 |
2 | 248 | 270 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g7322.t1 MGPPRFHPASLCFPFFFLFSFFRRVASFPAASAASSTCSLPARVIFLLALSSLGSAVNTAGWTVRPSNNSGDLSW TGGLRFLLNSSQVHLPASVRLAPLTQALVDLNQAELAQYLVSGTLLDVDATNSLSLSRKDIAVISCDPSAYPGNL DASSTLGNVLTAQQQALAVILYSGTSLLCNYTTDEPSANRYINVFTIVNPTLNRQVQSQLEAPGNGTTYIGTNMS YLGPTTTTQDQTQSSGSPNTAMIILYSITGIITALFLAIIITGAVRAHRHPERYGPRYTAGRPRQSRARGIARAM LDTIPIVKFGDNAPADGKSVGPKGDVEMGSGLEVPANELEERDVTTTAEVTSPHQPQTEAPPTESQEEKQSDAPA AETTTEHPNFSCPICTDDFVKGQDLRVLPCNHQFHPECIDPWLVNVSGTCPLCRIDLNPPQQEGEEEQDLGDGHP ETAAEGAAEATVESSHGRHRRISNYLHGTLNARRMRDASVEERLAALRSVREEANREEAADEADEQRIRRRNRLT TRLREKFRVRTRAHGEVAEPSPSTDAPPA* |
Coding | >Ani_SJS100_1|g7322.t1 ATGGGTCCTCCCCGTTTCCATCCTGCTTCACTCTGCTTTCCTTTCTTCTTTTTATTCTCCTTCTTCCGTCGTGTT GCTTCCTTTCCTGCTGCGTCTGCTGCTTCCTCCACCTGTTCGCTCCCCGCTCGCGTTATCTTCCTGCTCGCCCTC TCGTCCCTCGGCTCTGCAGTGAACACGGCCGGTTGGACCGTGCGGCCGTCCAACAACTCTGGGGATCTGTCGTGG ACTGGAGGTCTCCGGTTCCTTTTGAATAGCAGTCAGGTTCACCTGCCAGCGTCCGTCCGTCTCGCCCCGTTGACC CAGGCTCTGGTGGATCTCAATCAGGCGGAACTTGCGCAATATCTGGTGTCGGGGACTCTGTTGGATGTGGATGCC ACCAACTCTCTGTCATTGAGCCGCAAAGATATCGCGGTGATCAGTTGCGACCCATCCGCCTATCCCGGGAACCTG GATGCCAGCTCGACGCTAGGCAACGTCCTCACCGCACAGCAGCAGGCTCTTGCCGTCATCTTATATAGTGGCACC TCCCTGCTCTGCAACTATACGACGGATGAACCATCCGCCAACCGCTATATCAACGTCTTTACGATCGTAAATCCG ACTTTGAATCGGCAAGTCCAGTCCCAACTCGAAGCTCCAGGCAACGGAACGACTTATATCGGCACCAACATGTCG TATCTTGGCCCCACCACAACGACCCAGGACCAGACCCAGTCGTCCGGGAGTCCGAACACGGCCATGATTATCCTG TATAGTATCACAGGTATTATCACTGCCCTCTTTCTAGCCATCATTATTACCGGTGCGGTGCGTGCGCACCGCCAT CCGGAGCGCTATGGGCCTCGGTATACCGCGGGACGACCGCGACAAAGTCGAGCGCGAGGGATAGCGCGAGCCATG TTAGATACGATCCCGATCGTCAAGTTCGGGGACAACGCCCCAGCCGACGGCAAGTCGGTTGGCCCCAAGGGGGAT GTTGAGATGGGTTCGGGGTTGGAGGTGCCGGCCAATGAGTTAGAGGAACGAGATGTGACCACGACTGCGGAGGTC ACCTCCCCACACCAGCCTCAAACGGAAGCGCCCCCGACAGAATCGCAGGAAGAAAAGCAAAGCGATGCTCCTGCG GCGGAGACGACGACGGAACACCCGAACTTTTCGTGCCCTATTTGCACGGACGACTTTGTCAAGGGGCAGGATTTG CGCGTGCTGCCGTGTAACCATCAATTCCACCCCGAGTGTATTGATCCCTGGCTGGTGAATGTGTCGGGTACATGT CCTCTCTGCCGTATCGATCTCAACCCCCCGCAGCAAGAAGGCGAGGAGGAACAAGACCTGGGCGATGGGCACCCG GAGACGGCAGCCGAGGGAGCCGCCGAGGCAACAGTCGAGAGTAGCCATGGTCGCCACCGACGCATCAGCAACTAC TTGCACGGCACGTTGAATGCGCGGCGCATGCGCGACGCCAGCGTGGAGGAGCGCCTTGCGGCGCTGCGGAGCGTG CGGGAAGAGGCCAACCGGGAGGAAGCGGCCGACGAAGCGGATGAGCAGCGGATCCGGCGACGCAATCGGTTGACG ACGCGACTGCGTGAGAAGTTCCGGGTGCGCACGCGGGCGCACGGCGAGGTGGCAGAACCGTCACCATCGACTGAC GCGCCGCCTGCATGA |
Transcript | >Ani_SJS100_1|g7322.t1 ATGGGTCCTCCCCGTTTCCATCCTGCTTCACTCTGCTTTCCTTTCTTCTTTTTATTCTCCTTCTTCCGTCGTGTT GCTTCCTTTCCTGCTGCGTCTGCTGCTTCCTCCACCTGTTCGCTCCCCGCTCGCGTTATCTTCCTGCTCGCCCTC TCGTCCCTCGGCTCTGCAGTGAACACGGCCGGTTGGACCGTGCGGCCGTCCAACAACTCTGGGGATCTGTCGTGG ACTGGAGGTCTCCGGTTCCTTTTGAATAGCAGTCAGGTTCACCTGCCAGCGTCCGTCCGTCTCGCCCCGTTGACC CAGGCTCTGGTGGATCTCAATCAGGCGGAACTTGCGCAATATCTGGTGTCGGGGACTCTGTTGGATGTGGATGCC ACCAACTCTCTGTCATTGAGCCGCAAAGATATCGCGGTGATCAGTTGCGACCCATCCGCCTATCCCGGGAACCTG GATGCCAGCTCGACGCTAGGCAACGTCCTCACCGCACAGCAGCAGGCTCTTGCCGTCATCTTATATAGTGGCACC TCCCTGCTCTGCAACTATACGACGGATGAACCATCCGCCAACCGCTATATCAACGTCTTTACGATCGTAAATCCG ACTTTGAATCGGCAAGTCCAGTCCCAACTCGAAGCTCCAGGCAACGGAACGACTTATATCGGCACCAACATGTCG TATCTTGGCCCCACCACAACGACCCAGGACCAGACCCAGTCGTCCGGGAGTCCGAACACGGCCATGATTATCCTG TATAGTATCACAGGTATTATCACTGCCCTCTTTCTAGCCATCATTATTACCGGTGCGGTGCGTGCGCACCGCCAT CCGGAGCGCTATGGGCCTCGGTATACCGCGGGACGACCGCGACAAAGTCGAGCGCGAGGGATAGCGCGAGCCATG TTAGATACGATCCCGATCGTCAAGTTCGGGGACAACGCCCCAGCCGACGGCAAGTCGGTTGGCCCCAAGGGGGAT GTTGAGATGGGTTCGGGGTTGGAGGTGCCGGCCAATGAGTTAGAGGAACGAGATGTGACCACGACTGCGGAGGTC ACCTCCCCACACCAGCCTCAAACGGAAGCGCCCCCGACAGAATCGCAGGAAGAAAAGCAAAGCGATGCTCCTGCG GCGGAGACGACGACGGAACACCCGAACTTTTCGTGCCCTATTTGCACGGACGACTTTGTCAAGGGGCAGGATTTG CGCGTGCTGCCGTGTAACCATCAATTCCACCCCGAGTGTATTGATCCCTGGCTGGTGAATGTGTCGGGTACATGT CCTCTCTGCCGTATCGATCTCAACCCCCCGCAGCAAGAAGGCGAGGAGGAACAAGACCTGGGCGATGGGCACCCG GAGACGGCAGCCGAGGGAGCCGCCGAGGCAACAGTCGAGAGTAGCCATGGTCGCCACCGACGCATCAGCAACTAC TTGCACGGCACGTTGAATGCGCGGCGCATGCGCGACGCCAGCGTGGAGGAGCGCCTTGCGGCGCTGCGGAGCGTG CGGGAAGAGGCCAACCGGGAGGAAGCGGCCGACGAAGCGGATGAGCAGCGGATCCGGCGACGCAATCGGTTGACG ACGCGACTGCGTGAGAAGTTCCGGGTGCGCACGCGGGCGCACGGCGAGGTGGCAGAACCGTCACCATCGACTGAC GCGCCGCCTGCATGA |
Gene | >Ani_SJS100_1|g7322.t1 ATGGGTCCTCCCCGTTTCCATCCTGCTTCACTCTGCTTTCCTTTCTTCTTTTTATTCTCCTTCTTCCGTCGTGTT GCTTCCTTTCCTGCTGCGTCTGCTGCTTCCTCCACCTGTTCGCTCCCCGCTCGCGTTATCTTCCTGCTCGCCCTC TCGTCCCTCGGCTCTGCAGTGAACACGGCCGGTTGGACCGTGCGGCCGTCCAACAACTCTGGGGATCTGTCGTGG ACTGGAGGTCTCCGGTTCCTTTTGAATAGCAGTCAGGTTCACCTGCCAGCGTCCGTCCGTCTCGCCCCGTTGACC CAGGCTCTGGTGGATCTCAATCAGGCGGAACTTGCGGTTAGTCAGCCCTGTCAATGCCTCACCGTGCCCGAGACT GATGGATCTAGCAATATCTGGTGTCGGGGACTCTGTTGGATGTGGATGCCACCAACTCTCTGTCATTGAGCCGCA AAGATATCGCGGTGATCAGTTGCGACCCATCCGCCTATCCCGGGAACCTGGATGCCAGCTCGACGCTAGGCAACG TCCTCACCGCACAGCAGCAGGCTCTTGCCGTCATCTTATATAGTGGCACCTCCCTGCTCTGCAACTATACGACGG ATGAACCATCCGCCAACCGCTATATCAACGTCTTTACGATCGTAAATCCGACTTTGAATCGGCAAGTCCAGTCCC AACTCGAAGCTCCAGGCAACGGAACGACTTATATCGGCACCAACATGTCGTATCTTGGCCCCACCACAACGACCC AGGACCAGACCCAGTCGTCCGGGAGTCCGAACACGGGTATGCCGGACCCCTCAATTGCCGCGGTAGCATGTGCTA ATCTGCCACAGCCATGATTATCCTGTATAGTATCACAGGTATTATCACTGCCCTCTTTCTAGCCATCATTATTAC CGGTGCGGTGCGTGCGCACCGCCATCCGGAGCGCTATGGGCCTCGGTATACCGCGGGACGACCGCGACAAAGTCG AGCGCGAGGGATAGCGCGAGCCATGTTAGATACGATCCCGATCGTCAAGTTCGGGGACAACGCCCCAGCCGACGG CAAGTCGGTTGGCCCCAAGGGGGATGTTGAGATGGGTTCGGGGTTGGAGGTGCCGGCCAATGAGTTAGAGGAACG AGATGTGACCACGACTGCGGAGGTCACCTCCCCACACCAGCCTCAAACGGAAGCGCCCCCGACAGAATCGCAGGA AGAAAAGCAAAGCGATGCTCCTGCGGCGGAGACGACGACGGAACACCCGAACTTTTCGTGCCCTATTTGCACGGA CGACTTTGTCAAGGGGCAGGATTTGCGCGTGCTGCCGTGTAACCATCAATTCCACCCCGAGTGTATTGATCCCTG GCTGGTGAATGTGTCGGGTACATGTCCTCTCTGGTATGTATTCTATCCGTTGTACTTCTCTGCTTGACATGCATT TACTGACCCCTGCAGCCGTATCGATCTCAACCCCCCGCAGCAAGAAGGCGAGGAGGAACAAGACCTGGGCGATGG GCACCCGGAGACGGCAGCCGAGGGAGCCGCCGAGGCAACAGTCGAGAGTAGCCATGGTCGCCACCGACGCATCAG CAACTACTTGCACGGCACGTTGAATGCGCGGCGCATGCGCGACGCCAGCGTGGAGGAGCGCCTTGCGGCGCTGCG GAGCGTGCGGGAAGAGGCCAACCGGGAGGAAGCGGCCGACGAAGCGGATGAGCAGCGGATCCGGCGACGCAATCG GTTGACGACGCGACTGCGTGAGAAGTTCCGGGTGCGCACGCGGGCGCACGGCGAGGTGGCAGAACCGTCACCATC GACTGACGCGCCGCCTGCATGA |