Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g7303.t1
Gene name
Location	scaffold_050:188881..189687
Strand	-
Gene length (bp)	806
Transcript length (bp)	756
Coding sequence length (bp)	756
Protein length (aa)	252

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13577	SnoaL_4	SnoaL-like domain	1.1E-08	51	167

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 12	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g7303.t1 MSGMGQSDKIPSSGKPALFRVPDKGNYGLGAEPPSASNRLTYNTDNASTLERFKIREICEGWPLHRDACEWSDLR EIFDPKAFINISWQQNYRDKAIDTWAEGWAKGEFICHRVLGHAVDIKGDRAIDKMKCTISWRFADENGVEWDSDC DCRFGYFLKKQPEGWKIFCNHPIYEKDKCVPVDPTRPPHIDHESLAKEPKGYQFLAYGMRRLGYPIKQNLPQLFG RERDMVYKNMAEWLDGKDIDFSKDDF*
Coding	>Ani_SJS100_1\|g7303.t1 ATGAGCGGCATGGGCCAATCGGACAAAATCCCCTCGAGCGGGAAACCTGCGCTTTTCAGAGTACCCGACAAAGGC AATTATGGTCTGGGTGCTGAGCCCCCTTCTGCATCAAACCGTCTAACGTACAACACCGATAACGCTTCTACTCTG GAGCGGTTCAAAATCCGCGAGATCTGCGAAGGCTGGCCCCTTCATCGCGATGCCTGCGAATGGTCTGATCTAAGG GAAATATTTGATCCAAAGGCATTTATCAATATCAGCTGGCAGCAAAATTATCGAGACAAGGCCATTGATACCTGG GCTGAAGGATGGGCTAAAGGTGAATTCATTTGTCATCGGGTTCTAGGCCATGCAGTAGACATCAAGGGTGATAGG GCTATCGATAAGATGAAGTGTACGATTTCCTGGCGTTTTGCCGATGAAAACGGTGTTGAATGGGATAGCGACTGT GACTGTCGTTTTGGATACTTCCTGAAGAAGCAGCCGGAAGGATGGAAAATTTTCTGCAATCATCCCATCTATGAG AAGGACAAATGTGTACCAGTGGACCCCACTCGACCACCACATATTGACCATGAATCTCTAGCAAAGGAGCCCAAA GGCTACCAGTTTCTGGCTTACGGTATGCGCCGGCTCGGCTACCCAATCAAGCAGAATCTGCCCCAGTTGTTCGGC AGGGAGCGTGACATGGTATATAAGAACATGGCTGAGTGGCTGGATGGTAAGGATATCGATTTCTCTAAAGATGAC TTCTGA
Transcript	>Ani_SJS100_1\|g7303.t1 ATGAGCGGCATGGGCCAATCGGACAAAATCCCCTCGAGCGGGAAACCTGCGCTTTTCAGAGTACCCGACAAAGGC AATTATGGTCTGGGTGCTGAGCCCCCTTCTGCATCAAACCGTCTAACGTACAACACCGATAACGCTTCTACTCTG GAGCGGTTCAAAATCCGCGAGATCTGCGAAGGCTGGCCCCTTCATCGCGATGCCTGCGAATGGTCTGATCTAAGG GAAATATTTGATCCAAAGGCATTTATCAATATCAGCTGGCAGCAAAATTATCGAGACAAGGCCATTGATACCTGG GCTGAAGGATGGGCTAAAGGTGAATTCATTTGTCATCGGGTTCTAGGCCATGCAGTAGACATCAAGGGTGATAGG GCTATCGATAAGATGAAGTGTACGATTTCCTGGCGTTTTGCCGATGAAAACGGTGTTGAATGGGATAGCGACTGT GACTGTCGTTTTGGATACTTCCTGAAGAAGCAGCCGGAAGGATGGAAAATTTTCTGCAATCATCCCATCTATGAG AAGGACAAATGTGTACCAGTGGACCCCACTCGACCACCACATATTGACCATGAATCTCTAGCAAAGGAGCCCAAA GGCTACCAGTTTCTGGCTTACGGTATGCGCCGGCTCGGCTACCCAATCAAGCAGAATCTGCCCCAGTTGTTCGGC AGGGAGCGTGACATGGTATATAAGAACATGGCTGAGTGGCTGGATGGTAAGGATATCGATTTCTCTAAAGATGAC TTCTGA
Gene	>Ani_SJS100_1\|g7303.t1 ATGAGCGGCATGGGCCAATCGGACAAAATCCCCTCGAGCGGGAAACCTGCGCTTTTCAGAGTACCCGACAAAGGC AATTATGGTCTGGGTGCTGAGCCCCCTTCTGCATCAAACCGTCTAACGTACAACACCGATAACGCTTCTACTCTG GAGCGGTTCAAAATCCGCGAGATCTGCGAAGGCTGGCCCCTTCATCGCGATGCCTGCGAATGGTCTGATCTAAGG GAAATATTTGATCCAAAGGCATTTATCAATATCAGCTGGCAGCAAAATTATCGAGACAAGGCCATTGATACCTGG GCTGAAGGATGGGCTAAAGGTGAATTCATTTGTCATCGGGTTCTAGGCCATGCAGTAGACATCAAGGGTGATAGG GCTATCGATAAGATGAAGTGTACGATTTCCTGGCGTTTTGCCGATGAAAACGGTGTTGAATGGGATAGCGACTGG TAATTCTCTCCCGTGTCAGATATGAGCCTACTAACATTGATGATTTTAGTGACTGTCGTTTTGGATACTTCCTGA AGAAGCAGCCGGAAGGATGGAAAATTTTCTGCAATCATCCCATCTATGAGAAGGACAAATGTGTACCAGTGGACC CCACTCGACCACCACATATTGACCATGAATCTCTAGCAAAGGAGCCCAAAGGCTACCAGTTTCTGGCTTACGGTA TGCGCCGGCTCGGCTACCCAATCAAGCAGAATCTGCCCCAGTTGTTCGGCAGGGAGCGTGACATGGTATATAAGA ACATGGCTGAGTGGCTGGATGGTAAGGATATCGATTTCTCTAAAGATGACTTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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