© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g7300.t1 |
| Gene name | |
| Location | scaffold_050:179247..180934 |
| Strand | - |
| Gene length (bp) | 1687 |
| Transcript length (bp) | 1533 |
| Coding sequence length (bp) | 1533 |
| Protein length (aa) | 511 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02133 | Transp_cyt_pur | Permease for cytosine/purines, uracil, thiamine, allantoin | 1.9E-38 | 60 | 476 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 67 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 77 | 99 | 22 |
| 2 | 104 | 126 | 22 |
| 3 | 139 | 161 | 22 |
| 4 | 181 | 203 | 22 |
| 5 | 208 | 227 | 19 |
| 6 | 247 | 269 | 22 |
| 7 | 281 | 303 | 22 |
| 8 | 343 | 365 | 22 |
| 9 | 378 | 400 | 22 |
| 10 | 410 | 432 | 22 |
| 11 | 445 | 467 | 22 |
| 12 | 482 | 500 | 18 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g7300.t1 MFGGVESDLEKAPQVGKTPMDDSSDGAVPGESFMYGNSLYAKLQRLAGKLNIEQRGVERVPDNERTDTSYFNISS MWLAANMVSSSFAIGVLGYSTFALGFVDAILVCFFFNLLGVLTVCWFSCFGPAFGLRQMVLSRFWFGYWPTKIIA LLNVLSCLGWSAANSIVGAQLLNAVNSDVPGFAGILIIAICTLFVTFAGYKVVHLYEYYSWIPTFIVFMIVFGLF AHSGDFRNLPMGTGTSELGSCLSYGATVYGFATGWTSYAADYTVYQPANRSRRKIFFAAWGGLIPPLLFTQFLGI AVMTATSINGGDNKYARGYSESGNGGLLGAVLDPVGGFGKFCLVILSLSIIANNCPNIYSVSLTLQVLSRYSQRV PRFIWVLLASGVSIAVAIPGYSHFEEVLENLMDFIAYWLAIYSGVALADHIVRRGFSGYRPETYDKPNKLPYGIA ACISFAFGVAGMVTGMSETWYTGPIAKHAGNGDVGFELALLFSFVVHSVLRPIELKMLGR* |
| Coding | >Ani_SJS100_1|g7300.t1 ATGTTCGGAGGAGTCGAGTCCGATCTCGAAAAAGCCCCCCAGGTGGGCAAAACGCCCATGGATGACAGCAGCGAT GGCGCTGTCCCTGGGGAGAGTTTTATGTACGGCAATTCGCTGTACGCTAAGCTGCAACGGTTGGCGGGGAAGCTC AATATTGAGCAGCGAGGTGTCGAACGTGTCCCGGACAATGAACGGACTGACACGTCGTACTTCAATATCAGCAGC ATGTGGCTGGCGGCCAACATGGTGAGCAGTTCTTTCGCTATCGGCGTGCTTGGTTACTCCACCTTCGCTCTCGGC TTCGTCGATGCCATCCTCGTCTGCTTCTTCTTCAACCTGCTGGGTGTCTTGACTGTCTGCTGGTTCTCCTGCTTT GGTCCCGCCTTCGGTCTGCGCCAGATGGTGCTTTCCCGGTTCTGGTTTGGTTACTGGCCTACCAAGATCATTGCT CTTCTCAACGTTCTCTCCTGTTTGGGCTGGTCCGCCGCCAACTCCATCGTCGGCGCCCAGCTTCTCAATGCTGTG AACTCCGACGTTCCTGGATTTGCAGGCATCTTGATCATCGCCATCTGCACCCTCTTCGTCACCTTCGCCGGATAC AAGGTCGTCCACTTGTACGAATACTACAGCTGGATCCCCACCTTCATTGTCTTCATGATCGTGTTCGGATTGTTC GCCCACTCCGGTGACTTCAGAAACCTCCCCATGGGAACTGGAACCTCTGAGCTCGGCTCTTGCCTGTCTTACGGT GCGACTGTCTATGGTTTCGCCACTGGCTGGACCAGTTACGCCGCCGATTACACCGTCTACCAGCCCGCGAACCGC AGCCGCCGCAAGATCTTCTTCGCCGCCTGGGGAGGTCTGATCCCCCCTCTTCTCTTCACCCAGTTCCTGGGTATT GCCGTCATGACCGCCACTTCCATCAATGGCGGAGACAACAAGTACGCCCGTGGTTATAGCGAGTCTGGAAACGGA GGTCTTCTGGGCGCTGTCCTTGACCCCGTTGGCGGATTCGGCAAGTTCTGTCTGGTGATTCTGTCTCTGTCCATC ATCGCCAACAACTGCCCCAACATCTACTCCGTCTCCTTGACCCTCCAGGTCCTGAGTCGCTACTCCCAGCGCGTT CCCCGTTTCATCTGGGTCCTCCTTGCCTCTGGTGTCTCCATCGCCGTCGCCATCCCCGGTTATTCCCACTTCGAA GAGGTTCTGGAAAACCTAATGGACTTCATCGCCTATTGGCTGGCCATCTACTCCGGTGTCGCTCTTGCCGACCAC ATCGTTCGCCGTGGTTTCTCCGGATATCGCCCCGAGACATATGACAAGCCCAACAAGCTGCCCTATGGTATCGCC GCTTGCATCTCCTTTGCTTTCGGTGTCGCAGGTATGGTCACGGGCATGAGTGAGACGTGGTACACTGGTCCCATC GCCAAGCATGCTGGTAATGGTGATGTCGGTTTCGAGTTGGCTCTTCTCTTTTCTTTCGTCGTGCATTCCGTTCTG AGACCCATTGAGCTGAAAATGCTGGGTCGGTAA |
| Transcript | >Ani_SJS100_1|g7300.t1 ATGTTCGGAGGAGTCGAGTCCGATCTCGAAAAAGCCCCCCAGGTGGGCAAAACGCCCATGGATGACAGCAGCGAT GGCGCTGTCCCTGGGGAGAGTTTTATGTACGGCAATTCGCTGTACGCTAAGCTGCAACGGTTGGCGGGGAAGCTC AATATTGAGCAGCGAGGTGTCGAACGTGTCCCGGACAATGAACGGACTGACACGTCGTACTTCAATATCAGCAGC ATGTGGCTGGCGGCCAACATGGTGAGCAGTTCTTTCGCTATCGGCGTGCTTGGTTACTCCACCTTCGCTCTCGGC TTCGTCGATGCCATCCTCGTCTGCTTCTTCTTCAACCTGCTGGGTGTCTTGACTGTCTGCTGGTTCTCCTGCTTT GGTCCCGCCTTCGGTCTGCGCCAGATGGTGCTTTCCCGGTTCTGGTTTGGTTACTGGCCTACCAAGATCATTGCT CTTCTCAACGTTCTCTCCTGTTTGGGCTGGTCCGCCGCCAACTCCATCGTCGGCGCCCAGCTTCTCAATGCTGTG AACTCCGACGTTCCTGGATTTGCAGGCATCTTGATCATCGCCATCTGCACCCTCTTCGTCACCTTCGCCGGATAC AAGGTCGTCCACTTGTACGAATACTACAGCTGGATCCCCACCTTCATTGTCTTCATGATCGTGTTCGGATTGTTC GCCCACTCCGGTGACTTCAGAAACCTCCCCATGGGAACTGGAACCTCTGAGCTCGGCTCTTGCCTGTCTTACGGT GCGACTGTCTATGGTTTCGCCACTGGCTGGACCAGTTACGCCGCCGATTACACCGTCTACCAGCCCGCGAACCGC AGCCGCCGCAAGATCTTCTTCGCCGCCTGGGGAGGTCTGATCCCCCCTCTTCTCTTCACCCAGTTCCTGGGTATT GCCGTCATGACCGCCACTTCCATCAATGGCGGAGACAACAAGTACGCCCGTGGTTATAGCGAGTCTGGAAACGGA GGTCTTCTGGGCGCTGTCCTTGACCCCGTTGGCGGATTCGGCAAGTTCTGTCTGGTGATTCTGTCTCTGTCCATC ATCGCCAACAACTGCCCCAACATCTACTCCGTCTCCTTGACCCTCCAGGTCCTGAGTCGCTACTCCCAGCGCGTT CCCCGTTTCATCTGGGTCCTCCTTGCCTCTGGTGTCTCCATCGCCGTCGCCATCCCCGGTTATTCCCACTTCGAA GAGGTTCTGGAAAACCTAATGGACTTCATCGCCTATTGGCTGGCCATCTACTCCGGTGTCGCTCTTGCCGACCAC ATCGTTCGCCGTGGTTTCTCCGGATATCGCCCCGAGACATATGACAAGCCCAACAAGCTGCCCTATGGTATCGCC GCTTGCATCTCCTTTGCTTTCGGTGTCGCAGGTATGGTCACGGGCATGAGTGAGACGTGGTACACTGGTCCCATC GCCAAGCATGCTGGTAATGGTGATGTCGGTTTCGAGTTGGCTCTTCTCTTTTCTTTCGTCGTGCATTCCGTTCTG AGACCCATTGAGCTGAAAATGCTGGGTCGGTAA |
| Gene | >Ani_SJS100_1|g7300.t1 ATGTTCGGAGGAGTCGAGTCCGATCTCGAAAAAGCCCCCCAGGTGGGCAAAACGCCCATGGATGACAGCAGCGAT GGCGCTGTCCCTGGGGAGAGTTTTATGTACGGCAATTCGCTGTACGCTAAGCTGCAACGGTTGGCGGGGAAGCTC AATATTGAGCAGCGAGGTGTCGAACGTGTCCCGGACAATGAACGGACTGACACGTCGTACTTCAATATCAGCAGC ATGGTGTGTTCCTAACTCTTGTTTGCCTTGTGCTTTCGTCTCCGTCGGCTCTCTCGTCGGCTGCTCCAAGACCGC CCTCCCAAACTGACCCGTCGCAGTGGCTGGCGGCCAACATGGTGAGCAGTTCTTTCGCTATCGGCGTGCTTGGTT ACTCCACCTTCGCTCTCGGCTTCGTCGATGCCATCCTCGTCTGCTTCTTCTTCAACCTGCTGGGTGTCTTGACTG TCTGCTGGTTCTCCTGCTTTGGTCCCGCCTTCGGTCTGCGCCAGATGGTGCTTTCCCGGTTCTGGTTTGGTTACT GGCCTACCAAGATCAGTAAGTTTCTCTGTGACAATATTGATATCATAACCAGATGCTTATATCCTCTGCTACAGT TGCTCTTCTCAACGTTCTCTCCTGTTTGGGCTGGTCCGCCGCCAACTCCATCGTCGGCGCCCAGCTTCTCAATGC TGTGAACTCCGACGTTCCTGGATTTGCAGGCATCTTGATCATCGCCATCTGCACCCTCTTCGTCACCTTCGCCGG ATACAAGGTCGTCCACTTGTACGAATACTACAGCTGGATCCCCACCTTCATTGTCTTCATGATCGTGTTCGGATT GTTCGCCCACTCCGGTGACTTCAGAAACCTCCCCATGGGAACTGGAACCTCTGAGCTCGGCTCTTGCCTGTCTTA CGGTGCGACTGTCTATGGTTTCGCCACTGGCTGGACCAGTTACGCCGCCGATTACACCGTCTACCAGCCCGCGAA CCGCAGCCGCCGCAAGATCTTCTTCGCCGCCTGGGGAGGTCTGATCCCCCCTCTTCTCTTCACCCAGTTCCTGGG TATTGCCGTCATGACCGCCACTTCCATCAATGGCGGAGACAACAAGTACGCCCGTGGTTATAGCGAGTCTGGAAA CGGAGGTCTTCTGGGCGCTGTCCTTGACCCCGTTGGCGGATTCGGCAAGTTCTGTCTGGTGATTCTGTCTCTGTC CATCATCGCCAACAACTGCCCCAACATCTACTCCGTCTCCTTGACCCTCCAGGTCCTGAGTCGCTACTCCCAGCG CGTTCCCCGTTTCATCTGGGTCCTCCTTGCCTCTGGTGTCTCCATCGCCGTCGCCATCCCCGGTTATTCCCACTT CGAAGAGGTTCTGGAAAACCTAATGGACTTCATCGCCTATTGGCTGGCCATCTACTCCGGTGTCGCTCTTGCCGA CCACATCGTTCGCCGTGGTTTCTCCGGATATCGCCCCGAGACATATGACAAGCCCAACAAGCTGCCCTATGGTAT CGCCGCTTGCATCTCCTTTGCTTTCGGTGTCGCAGGTATGGTCACGGGCATGAGTGAGACGTGGTACACTGGTCC CATCGCCAAGCATGCTGGTAATGGTGATGTCGGTTTCGAGTTGGCTCTTCTCTTTTCTTTCGTCGTGCATTCCGT TCTGAGACCCATTGAGCTGAAAATGCTGGGTCGGTAA |