Protein ID | Ani_SJS100_1|g7281.t1 |
Gene name | |
Location | scaffold_050:108522..109258 |
Strand | + |
Gene length (bp) | 736 |
Transcript length (bp) | 444 |
Coding sequence length (bp) | 444 |
Protein length (aa) | 148 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00428 | Ribosomal_60s | 60s Acidic ribosomal protein | 8.4E-23 | 61 | 146 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 30 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 10 | 32 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g7281.t1 MGPQPTSRIALFLIFNFGFHFSLFPSITSLNPQRTRRVSLRPTLRLNRLILVFTTTTIQNESVLSAVGIDAEEER LQKLLAELEGKDLQELISEGTQKLASVPSGGAGAAAAAPAAGGAAAAEAPAEEKKEEAAEESDEDMGFGLFD* |
Coding | >Ani_SJS100_1|g7281.t1 ATGGGACCACAACCCACCAGCCGCATCGCACTTTTCTTGATTTTCAACTTCGGATTCCATTTCTCTCTTTTTCCG TCCATCACATCGCTCAACCCCCAGCGAACTCGACGTGTCAGTCTCCGCCCAACTTTGCGGTTAAATCGATTGATT CTCGTGTTCACCACCACAACTATTCAAAATGAATCCGTCCTCTCCGCCGTCGGCATTGACGCTGAGGAGGAGCGC CTCCAGAAGCTCCTTGCTGAGCTTGAGGGCAAGGACCTCCAGGAGCTCATCTCCGAGGGTACCCAGAAGCTCGCT TCCGTTCCCTCCGGTGGTGCCGGTGCTGCTGCCGCTGCCCCCGCTGCCGGTGGCGCCGCTGCTGCTGAGGCTCCC GCTGAGGAGAAGAAGGAGGAGGCTGCTGAGGAGTCCGATGAGGACATGGGCTTCGGTCTCTTCGACTAA |
Transcript | >Ani_SJS100_1|g7281.t1 ATGGGACCACAACCCACCAGCCGCATCGCACTTTTCTTGATTTTCAACTTCGGATTCCATTTCTCTCTTTTTCCG TCCATCACATCGCTCAACCCCCAGCGAACTCGACGTGTCAGTCTCCGCCCAACTTTGCGGTTAAATCGATTGATT CTCGTGTTCACCACCACAACTATTCAAAATGAATCCGTCCTCTCCGCCGTCGGCATTGACGCTGAGGAGGAGCGC CTCCAGAAGCTCCTTGCTGAGCTTGAGGGCAAGGACCTCCAGGAGCTCATCTCCGAGGGTACCCAGAAGCTCGCT TCCGTTCCCTCCGGTGGTGCCGGTGCTGCTGCCGCTGCCCCCGCTGCCGGTGGCGCCGCTGCTGCTGAGGCTCCC GCTGAGGAGAAGAAGGAGGAGGCTGCTGAGGAGTCCGATGAGGACATGGGCTTCGGTCTCTTCGACTAA |
Gene | >Ani_SJS100_1|g7281.t1 ATGGGAGTTAACGCATGCGCCACGGCCGCTCGCTTAACCGGAACTAGCACGATCTGCACTAGCCACAACCCACCA GCCGCATCGCACTTTTCTTGATTTTCAACTTCGGATTCCATTTCTCTCTTTTTCCGTCCATCACATCGCTCAACC CCCAGCGAACTCGACGTGTCAGTCTCCGCCCAACTTTGCGGTTAAATCGATTGATTCTCGTGTTCACCACCACAA CTGTACGTTGCCTTCTTGATTGCCTCGTTGCGAATTTCGACAGTACGACCACGACATTCTCGGCGCAGTTGTTCT GACAGGTTGTCTTGCAGATTCAAAATGAAGTACCTCGCCGCCTACCTTCTGTTGGCCCTTGCTGGCAACAACACC CCCTCCGCTGAGGACATCAAGTCCGTCCTCTCCGCCGTCGGCATTGACGCTGAGGAGGAGCGCCTCCAGAAGCTC CTTGCTGAGCTTGAGGGCAAGGACCTCCAGGAGGTCAGTTAACGCCCTTAAAATCTACCAAGAAATTTTGCGATT ACAAGATGGAATACTGACAATGGTTTTTCTACAACAGCTCATCTCCGAGGGTACCCAGAAGCTCGCTTCCGTTCC CTCCGGTGGTGCCGGTGCTGCTGCCGCTGCCCCCGCTGCCGGTGGCGCCGCTGCTGCTGAGGCTCCCGCTGAGGA GAAGAAGGAGGAGGCTGCTGAGGAGTCCGATGAGGACATGGGCTTCGGTCTCTTCGACTAA |