© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g7242.t1 |
| Gene name | |
| Location | scaffold_050:4090..4842 |
| Strand | - |
| Gene length (bp) | 752 |
| Transcript length (bp) | 510 |
| Coding sequence length (bp) | 510 |
| Protein length (aa) | 170 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00173 | Cyt-b5 | Cytochrome b5-like Heme/Steroid binding domain | 1.1E-13 | 59 | 158 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 43 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 15 | 37 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g7242.t1 MSTLDEAVPPPAEVMTIATPINLILLSLFVILVYLQLRPKAPVSLPKGPPPVVFRTFTPTTLLPFNGENDAPVYL AVRGRVFDVTPGKNFYGPGGPYENFAGRDASRGLACQSFDEEMLTKDLKGPLDDLKDLDNEQLENLQSWEERFSE KYLVVGKLVAEGDPEAENA* |
| Coding | >Ani_SJS100_1|g7242.t1 ATGTCCACACTAGACGAAGCCGTCCCGCCGCCCGCCGAAGTGATGACAATCGCCACCCCCATAAACCTCATCCTC CTCTCCCTCTTCGTCATCCTCGTCTACCTCCAACTTCGTCCCAAAGCCCCCGTCAGCCTCCCCAAGGGTCCTCCC CCCGTCGTCTTCCGCACCTTCACCCCGACCACTCTCCTCCCCTTCAACGGCGAGAACGACGCCCCCGTCTACCTT GCTGTCCGTGGCCGTGTATTCGACGTTACTCCCGGCAAGAACTTTTACGGGCCGGGCGGACCCTACGAGAACTTC GCCGGTCGCGACGCATCCCGCGGTTTGGCGTGCCAGAGCTTCGATGAGGAAATGCTCACCAAGGATCTGAAGGGT CCGTTGGATGATCTGAAGGATTTGGATAACGAGCAGTTGGAGAATCTGCAGTCGTGGGAGGAGCGCTTCTCCGAG AAGTACTTGGTTGTGGGGAAGCTGGTGGCGGAGGGGGATCCGGAGGCTGAGAATGCTTGA |
| Transcript | >Ani_SJS100_1|g7242.t1 ATGTCCACACTAGACGAAGCCGTCCCGCCGCCCGCCGAAGTGATGACAATCGCCACCCCCATAAACCTCATCCTC CTCTCCCTCTTCGTCATCCTCGTCTACCTCCAACTTCGTCCCAAAGCCCCCGTCAGCCTCCCCAAGGGTCCTCCC CCCGTCGTCTTCCGCACCTTCACCCCGACCACTCTCCTCCCCTTCAACGGCGAGAACGACGCCCCCGTCTACCTT GCTGTCCGTGGCCGTGTATTCGACGTTACTCCCGGCAAGAACTTTTACGGGCCGGGCGGACCCTACGAGAACTTC GCCGGTCGCGACGCATCCCGCGGTTTGGCGTGCCAGAGCTTCGATGAGGAAATGCTCACCAAGGATCTGAAGGGT CCGTTGGATGATCTGAAGGATTTGGATAACGAGCAGTTGGAGAATCTGCAGTCGTGGGAGGAGCGCTTCTCCGAG AAGTACTTGGTTGTGGGGAAGCTGGTGGCGGAGGGGGATCCGGAGGCTGAGAATGCTTGA |
| Gene | >Ani_SJS100_1|g7242.t1 ATGTCCACACTAGGTAATTTCCATCTCTATAAAATCCCCTAAATCAACAACATCATAAGCAAACTAACTCCATCC CTCCAGACGAAGCCGTCCCGCCGCCCGCCGAAGTGTCAGTGCTTACTACCCTCACCTATTCCCCTACAAACAACA AAACCACTTCCAATGAACCAAAACATAGTCACTAATAATATACAAAGGATGACAATCGCCACCCCCATAAACCTC ATCCTCCTCTCCCTCTTCGTCATCCTCGTCTACCTCCAACTTCGTCCCAAAGCCCCCGTCAGCCTCCCCAAGGGT CCTCCCCCCGTCGTCTTCCGCACCTTCACCCCGACCACTCTCCTCCCCTTCAACGGCGAGAACGACGCCCCCGTC TACCTTGCTGTCCGTGGCCGTGTATTCGACGTTACTCCCGGCAAGAACTTTTACGGGCCGGTAAATACCCCCTCT CCCCTTCTCCTCAACACCAATACCTCTCCGATAGAAGTAAGATACTAATGAAGAATCTACAAAATGTGCAGGGCG GACCCTACGAGAACTTCGCCGGTCGCGACGCATCCCGCGGTTTGGCGTGCCAGAGCTTCGATGAGGAAATGCTCA CCAAGGATCTGAAGGGTCCGTTGGATGATCTGAAGGATTTGGATAACGAGCAGTTGGAGAATCTGCAGTCGTGGG AGGAGCGCTTCTCCGAGAAGTACTTGGTTGTGGGGAAGCTGGTGGCGGAGGGGGATCCGGAGGCTGAGAATGCTT GA |