Protein ID | Ani_SJS100_1|g7226.t1 |
Gene name | |
Location | scaffold_049:201129..201983 |
Strand | + |
Gene length (bp) | 854 |
Transcript length (bp) | 792 |
Coding sequence length (bp) | 792 |
Protein length (aa) | 264 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04588 | HIG_1_N | Hypoxia induced protein conserved region | 2.5E-09 | 120 | 164 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 62 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 20 | 39 | 19 |
2 | 117 | 136 | 19 |
3 | 151 | 168 | 17 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g7226.t1 MKILTKEEEDAHYREVVKGGTIGGLIGLVGGAAGVLAATRRYQTIRNLTLPMKSFLVTSSGTFVGIISADHASRS FEAQRNASRQWYENREERLRQEELSHLSPIDRALQWARREKYKIVGATWVASMIGSFAMVNRNKHLSGSQKIVQA RVYAQGLTLAVLVASAAFEIQDQRKGRGLLQDKMKAEKQAAEERKNSEQEHTGDLWKDMVAAEEDRLRKRKMSLS ESDYLHPHNNGQEKKVEEVKEEKEEEPKKEEATEKKKE* |
Coding | >Ani_SJS100_1|g7226.t1 ATGAAGATCCTCACTAAAGAAGAAGAAGATGCTCACTACCGCGAGGTCGTCAAGGGCGGCACCATCGGTGGTCTC ATCGGTCTGGTCGGCGGCGCAGCAGGTGTCCTCGCCGCCACCAGGCGCTACCAGACAATTCGCAACCTCACTCTC CCCATGAAGTCCTTCCTCGTGACCTCCTCCGGTACCTTCGTGGGTATCATCAGCGCCGACCATGCCTCTCGCAGC TTCGAAGCCCAACGCAACGCCAGTCGCCAATGGTACGAGAACCGCGAGGAGCGTCTCCGTCAGGAAGAATTGTCG CACCTCTCCCCGATCGATCGCGCTCTGCAGTGGGCCCGTCGCGAGAAGTACAAGATCGTCGGTGCCACATGGGTG GCTAGTATGATCGGTAGTTTCGCCATGGTTAACCGGAACAAGCACCTCAGTGGCTCGCAGAAGATTGTCCAGGCG AGAGTTTACGCCCAGGGCTTGACCCTCGCTGTGTTGGTGGCCAGTGCGGCGTTTGAGATCCAGGATCAGAGGAAG GGTCGCGGCTTGCTGCAGGATAAGATGAAGGCCGAGAAGCAGGCTGCTGAGGAGAGGAAGAATTCTGAGCAGGAG CACACCGGTGATCTGTGGAAGGACATGGTTGCTGCCGAGGAGGATAGGTTGAGGAAGAGGAAGATGAGTCTGTCG GAGTCGGATTACTTGCACCCTCATAATAATGGGCAGGAGAAGAAGGTTGAGGAGGTGAAGGAAGAGAAGGAGGAA GAGCCTAAGAAGGAAGAGGCGACGGAGAAGAAGAAAGAGTAA |
Transcript | >Ani_SJS100_1|g7226.t1 ATGAAGATCCTCACTAAAGAAGAAGAAGATGCTCACTACCGCGAGGTCGTCAAGGGCGGCACCATCGGTGGTCTC ATCGGTCTGGTCGGCGGCGCAGCAGGTGTCCTCGCCGCCACCAGGCGCTACCAGACAATTCGCAACCTCACTCTC CCCATGAAGTCCTTCCTCGTGACCTCCTCCGGTACCTTCGTGGGTATCATCAGCGCCGACCATGCCTCTCGCAGC TTCGAAGCCCAACGCAACGCCAGTCGCCAATGGTACGAGAACCGCGAGGAGCGTCTCCGTCAGGAAGAATTGTCG CACCTCTCCCCGATCGATCGCGCTCTGCAGTGGGCCCGTCGCGAGAAGTACAAGATCGTCGGTGCCACATGGGTG GCTAGTATGATCGGTAGTTTCGCCATGGTTAACCGGAACAAGCACCTCAGTGGCTCGCAGAAGATTGTCCAGGCG AGAGTTTACGCCCAGGGCTTGACCCTCGCTGTGTTGGTGGCCAGTGCGGCGTTTGAGATCCAGGATCAGAGGAAG GGTCGCGGCTTGCTGCAGGATAAGATGAAGGCCGAGAAGCAGGCTGCTGAGGAGAGGAAGAATTCTGAGCAGGAG CACACCGGTGATCTGTGGAAGGACATGGTTGCTGCCGAGGAGGATAGGTTGAGGAAGAGGAAGATGAGTCTGTCG GAGTCGGATTACTTGCACCCTCATAATAATGGGCAGGAGAAGAAGGTTGAGGAGGTGAAGGAAGAGAAGGAGGAA GAGCCTAAGAAGGAAGAGGCGACGGAGAAGAAGAAAGAGTAA |
Gene | >Ani_SJS100_1|g7226.t1 ATGAAGATCCTCACTAAAGAAGAAGAAGATGCTCACTACCGGTACTTCCGCCCTCCCCGCCACCCAATTTCCGAA CAAAGTAACTAACCCAGCAACTTTCCAGCGAGGTCGTCAAGGGCGGCACCATCGGTGGTCTCATCGGTCTGGTCG GCGGCGCAGCAGGTGTCCTCGCCGCCACCAGGCGCTACCAGACAATTCGCAACCTCACTCTCCCCATGAAGTCCT TCCTCGTGACCTCCTCCGGTACCTTCGTGGGTATCATCAGCGCCGACCATGCCTCTCGCAGCTTCGAAGCCCAAC GCAACGCCAGTCGCCAATGGTACGAGAACCGCGAGGAGCGTCTCCGTCAGGAAGAATTGTCGCACCTCTCCCCGA TCGATCGCGCTCTGCAGTGGGCCCGTCGCGAGAAGTACAAGATCGTCGGTGCCACATGGGTGGCTAGTATGATCG GTAGTTTCGCCATGGTTAACCGGAACAAGCACCTCAGTGGCTCGCAGAAGATTGTCCAGGCGAGAGTTTACGCCC AGGGCTTGACCCTCGCTGTGTTGGTGGCCAGTGCGGCGTTTGAGATCCAGGATCAGAGGAAGGGTCGCGGCTTGC TGCAGGATAAGATGAAGGCCGAGAAGCAGGCTGCTGAGGAGAGGAAGAATTCTGAGCAGGAGCACACCGGTGATC TGTGGAAGGACATGGTTGCTGCCGAGGAGGATAGGTTGAGGAAGAGGAAGATGAGTCTGTCGGAGTCGGATTACT TGCACCCTCATAATAATGGGCAGGAGAAGAAGGTTGAGGAGGTGAAGGAAGAGAAGGAGGAAGAGCCTAAGAAGG AAGAGGCGACGGAGAAGAAGAAAGAGTAA |