Protein ID | Ani_SJS100_1|g7225.t1 |
Gene name | |
Location | scaffold_049:199083..200640 |
Strand | + |
Gene length (bp) | 1557 |
Transcript length (bp) | 1386 |
Coding sequence length (bp) | 1386 |
Protein length (aa) | 462 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08711 | Med26 | TFIIS helical bundle-like domain | 1.4E-10 | 308 | 359 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 39 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g7225.t1 MSEPRSPEPELKPAAEVDEQQQQQEAPPTPGGDAVSDEEPAKEVEAEAEPEAEEQQQEQEEQGEEEAAQDNGGDN DDDDDEDKISDDESILSEVDEAQFEDFDPENVDIEDRPQLAIDEDNLKLIGRHKRKRTEGGDEERSKRKREGRRE KKSRRMRELEDGGASDEEKASRRRKKKEAEIADEELLDPATRRRRALDRAMDEALKKPTKRRFRKADGIDLEQMA DAEIEDMRKRMTHAAQMDAINRREGKPAMHKLKMLPEVVSLLNRNQYVNSLVDPEINLLEAVKFFLEPLDDGSLP AYNIQRDLMTALGKLPINKEALVASGIGKVIVFYTRSKRPEPGIKRMAERLLAEWTRPILQRSDDYSKRVYQEAA FDPTKLSATRTQSVQATAAEARARELLPPRLANRARADMTHTSYTVVPRPTMVQESKFARPLGASGEDRFRKMRA RQIAASKGSRR* |
Coding | >Ani_SJS100_1|g7225.t1 ATGTCCGAACCGCGCAGTCCTGAGCCCGAGCTCAAGCCCGCCGCTGAAGTGGACGAACAGCAGCAACAACAGGAA GCGCCCCCGACGCCCGGCGGCGACGCCGTTTCCGACGAAGAGCCCGCCAAGGAGGTAGAGGCGGAGGCAGAGCCA GAAGCCGAAGAACAACAACAAGAACAAGAAGAACAAGGAGAAGAAGAGGCCGCGCAAGATAATGGTGGCGATAAT GATGACGATGACGACGAAGACAAGATCTCCGACGACGAATCGATTCTTTCGGAAGTCGACGAAGCCCAGTTCGAG GACTTCGATCCCGAGAATGTTGACATCGAGGACCGGCCGCAGCTGGCGATCGACGAGGATAACTTGAAGCTTATT GGACGGCATAAGCGGAAGCGTACGGAGGGTGGGGATGAAGAGCGCTCTAAGAGAAAGAGAGAGGGACGTCGCGAG AAGAAGAGTCGGAGGATGAGGGAGCTGGAGGATGGGGGTGCGAGTGATGAGGAGAAGGCTAGTCGGAGGAGGAAG AAGAAGGAGGCCGAGATTGCGGATGAGGAGTTGTTGGATCCGGCTACGAGACGGCGGAGAGCGCTTGATCGCGCA ATGGACGAGGCGTTGAAGAAGCCGACCAAGAGACGGTTTAGGAAAGCTGATGGCATTGACCTGGAACAAATGGCC GATGCTGAAATCGAAGATATGCGCAAGCGCATGACCCACGCTGCGCAGATGGACGCCATCAACCGTCGTGAGGGC AAGCCTGCCATGCATAAGCTGAAGATGCTCCCTGAGGTAGTCTCGCTGCTCAACCGCAACCAATACGTGAACAGT CTGGTCGACCCGGAAATCAACCTGCTGGAAGCGGTTAAGTTCTTCCTGGAGCCCTTGGACGATGGTTCCCTGCCG GCGTACAACATTCAGCGGGATCTGATGACTGCGCTGGGCAAGCTGCCGATCAACAAGGAGGCTCTGGTTGCCAGT GGCATCGGCAAGGTGATTGTGTTCTACACGCGGAGCAAGCGTCCGGAGCCGGGCATCAAGCGCATGGCGGAGCGT CTGCTGGCTGAATGGACGCGCCCGATCCTCCAGCGCAGCGACGATTACTCGAAGAGGGTATACCAGGAGGCTGCT TTTGACCCTACTAAACTGAGCGCGACACGCACTCAATCGGTACAGGCCACTGCTGCAGAGGCTCGTGCCCGTGAG CTACTGCCTCCTCGCCTGGCGAATCGCGCGCGCGCTGACATGACTCACACGAGCTATACGGTGGTGCCGCGACCG ACGATGGTACAGGAGAGCAAGTTTGCGCGACCTCTGGGAGCGAGCGGCGAGGATCGTTTCCGCAAGATGCGGGCG CGGCAGATTGCGGCGAGCAAGGGATCCCGTCGATGA |
Transcript | >Ani_SJS100_1|g7225.t1 ATGTCCGAACCGCGCAGTCCTGAGCCCGAGCTCAAGCCCGCCGCTGAAGTGGACGAACAGCAGCAACAACAGGAA GCGCCCCCGACGCCCGGCGGCGACGCCGTTTCCGACGAAGAGCCCGCCAAGGAGGTAGAGGCGGAGGCAGAGCCA GAAGCCGAAGAACAACAACAAGAACAAGAAGAACAAGGAGAAGAAGAGGCCGCGCAAGATAATGGTGGCGATAAT GATGACGATGACGACGAAGACAAGATCTCCGACGACGAATCGATTCTTTCGGAAGTCGACGAAGCCCAGTTCGAG GACTTCGATCCCGAGAATGTTGACATCGAGGACCGGCCGCAGCTGGCGATCGACGAGGATAACTTGAAGCTTATT GGACGGCATAAGCGGAAGCGTACGGAGGGTGGGGATGAAGAGCGCTCTAAGAGAAAGAGAGAGGGACGTCGCGAG AAGAAGAGTCGGAGGATGAGGGAGCTGGAGGATGGGGGTGCGAGTGATGAGGAGAAGGCTAGTCGGAGGAGGAAG AAGAAGGAGGCCGAGATTGCGGATGAGGAGTTGTTGGATCCGGCTACGAGACGGCGGAGAGCGCTTGATCGCGCA ATGGACGAGGCGTTGAAGAAGCCGACCAAGAGACGGTTTAGGAAAGCTGATGGCATTGACCTGGAACAAATGGCC GATGCTGAAATCGAAGATATGCGCAAGCGCATGACCCACGCTGCGCAGATGGACGCCATCAACCGTCGTGAGGGC AAGCCTGCCATGCATAAGCTGAAGATGCTCCCTGAGGTAGTCTCGCTGCTCAACCGCAACCAATACGTGAACAGT CTGGTCGACCCGGAAATCAACCTGCTGGAAGCGGTTAAGTTCTTCCTGGAGCCCTTGGACGATGGTTCCCTGCCG GCGTACAACATTCAGCGGGATCTGATGACTGCGCTGGGCAAGCTGCCGATCAACAAGGAGGCTCTGGTTGCCAGT GGCATCGGCAAGGTGATTGTGTTCTACACGCGGAGCAAGCGTCCGGAGCCGGGCATCAAGCGCATGGCGGAGCGT CTGCTGGCTGAATGGACGCGCCCGATCCTCCAGCGCAGCGACGATTACTCGAAGAGGGTATACCAGGAGGCTGCT TTTGACCCTACTAAACTGAGCGCGACACGCACTCAATCGGTACAGGCCACTGCTGCAGAGGCTCGTGCCCGTGAG CTACTGCCTCCTCGCCTGGCGAATCGCGCGCGCGCTGACATGACTCACACGAGCTATACGGTGGTGCCGCGACCG ACGATGGTACAGGAGAGCAAGTTTGCGCGACCTCTGGGAGCGAGCGGCGAGGATCGTTTCCGCAAGATGCGGGCG CGGCAGATTGCGGCGAGCAAGGGATCCCGTCGATGA |
Gene | >Ani_SJS100_1|g7225.t1 ATGTCCGAACCGCGCAGTCCTGAGCCCGAGCTCAAGCCCGCCGCTGAAGTGGACGAACAGCAGCAACAACAGGAA GCGCCCCCGACGCCCGGCGGCGACGCCGTTTCCGACGAAGAGCCCGCCAAGGAGGTAGAGGCGGAGGCAGAGCCA GAAGCCGAAGAACAACAACAAGAACAAGAAGAACAAGGAGAAGAAGAGGCCGCGCAAGATAATGGTGGCGATAAT GATGACGATGACGACGAAGACAAGATCTCCGACGACGAATCGATTCTTTCGGAAGTCGACGAAGCCCAGTTCGAG GACTTCGATCCCGAGAATGTTGACATCGAGGACCGGCCGCAGCTGGCGATCGACGAGGATAACTTGAAGCTTATT GGACGGCATAAGCGGAAGCGTACGGAGGGTGGGGATGAAGAGCGCTCTAAGAGAAAGAGAGAGGGACGTCGCGAG AAGAAGAGTCGGAGGATGAGGGAGCTGGAGGATGGGGGTGCGAGTGATGAGGAGAAGGCTAGTCGGAGGAGGAAG AAGAAGGAGGCCGAGATTGCGGATGAGGAGTTGTTGGATCCGGCTACGAGTATGTTCTTTCTTCTCTCTTACTGG GGATGATATGTTTGATGCTAATTGCTATGTTTAGGACGGCGGAGAGCGCTTGATCGCGCAATGGACGAGGCGTTG AAGAAGCCGACCAAGAGACGGTTTAGGAAAGCTGATGGCATTGTATGTTTACTTCTATTGTTTCGCGGGTTGATG CGATGATGGCTGACTCCCACAGGACCTGGAACAAATGGCCGATGCTGAAATCGAAGATATGCGCAAGCGCATGAC CCACGCTGCGCAGATGGACGCCATCAACCGTCGTGAGGGCAAGCCTGCCATGCATAAGCTGAAGATGCTCCCTGA GGTAGTCTCGCTGCTCAACCGCAACCAATACGTGAACAGTCTGGTCGACCCGGAAATCAACCTGCTGGAAGCGGT TAAGTTCTTCCTGGAGCCCTTGGACGATGGTTCCCTGCCGGCGTACAACATTCAGCGGGATCTGATGACTGCGCT GGGCAAGCTGCCGATCAACAAGGAGGCTCTGGTTGCCAGTGGCATCGGCAAGGTGATTGTGTTCTACACGCGGAG CAAGCGTCCGGAGCCGGGCATCAAGCGCATGGCGGAGCGTCTGCTGGCTGAATGGACGCGCCCGATCCTCCAGCG CAGCGACGATTACTCGAAGAGGGTATACCAGGAGGCTGCTTTTGACCCTACGTATGTTCATTCCTACTCAGACCC TACCACGTCGATTGTATCGCTAACCGGAACAGTAAACTGAGCGCGACACGCACTCAATCGGTACAGGCCACTGCT GCAGAGGCTCGTGCCCGTGAGCTACTGCCTCCTCGCCTGGCGAATCGCGCGCGCGCTGACATGACTCACACGAGC TATACGGTGGTGCCGCGACCGACGATGGTACAGGAGAGCAAGTTTGCGCGACCTCTGGGAGCGAGCGGCGAGGAT CGTTTCCGCAAGATGCGGGCGCGGCAGATTGCGGCGAGCAAGGGATCCCGTCGATGA |