© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g7221.t1 |
| Gene name | |
| Location | scaffold_049:190580..192282 |
| Strand | + |
| Gene length (bp) | 1702 |
| Transcript length (bp) | 1569 |
| Coding sequence length (bp) | 1569 |
| Protein length (aa) | 523 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 9.4E-64 | 27 | 472 |
| PF00324 | AA_permease | Amino acid permease | 1.1E-32 | 42 | 478 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 39 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 31 | 53 | 22 |
| 2 | 63 | 97 | 34 |
| 3 | 118 | 140 | 22 |
| 4 | 155 | 172 | 17 |
| 5 | 179 | 201 | 22 |
| 6 | 221 | 243 | 22 |
| 7 | 263 | 285 | 22 |
| 8 | 314 | 336 | 22 |
| 9 | 366 | 388 | 22 |
| 10 | 392 | 414 | 22 |
| 11 | 427 | 449 | 22 |
| 12 | 464 | 483 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g7221.t1 MRQPSMDANADEALARMGYKSELPRNLSMMSILGLSFAIMAAPFGLSTTLYITLTDGQSVSVIWGWVVVTLISIA IAASLAEICAVYPTAGGVYYWSAMLSTRKWAPAMSFIDGWLTLVGNWTVTLSITFSGGQLILSAISLWNEDFVAN TWQTILMFWAVIGACALVNIFFSKWLDLINKVCIYWTAASVVIILVTLLTMADERRDAEFVFAHYDASQSGWPAG WAFFVGLLQAAYTLTGYGMVAAMCEEVQNPHREVPKAIVLSVVAAGITGLVYLIPIMFVLPPVETLLAVASGQPI GLIFKTATGSAGGGFGLLFLVLGILVFAGIGALTAASRCTYAFARDGAIPGFRLWRQVNPKLDVPVWAIILSTVV DCLLGLIYFGSSAAFNSFTGVATICLSISYGLPIFICVLRGREAVKESSFSLGRFGYAINIVSICWICLAVVLFC MPTSLPVDASSMNYASVVFAGFAAISIGWYVVYARKHFTGPPVTDEDMPGVMTGKPIDTENTYAAHEKAGKE* |
| Coding | >Ani_SJS100_1|g7221.t1 ATGCGACAACCTTCCATGGATGCCAACGCCGATGAGGCGTTGGCTAGAATGGGTTACAAGAGTGAATTGCCTCGC AATTTGAGTATGATGAGTATTCTGGGCCTTTCCTTCGCCATCATGGCCGCCCCCTTCGGCCTCAGCACCACCCTC TACATCACCCTCACCGACGGCCAATCCGTCAGCGTCATCTGGGGCTGGGTCGTCGTCACCCTCATCTCCATCGCC ATTGCCGCCTCGCTGGCCGAGATCTGCGCCGTCTACCCCACCGCCGGCGGAGTCTACTACTGGAGTGCCATGCTC TCCACGCGGAAATGGGCTCCCGCCATGTCCTTCATCGATGGCTGGCTCACCCTCGTTGGCAATTGGACCGTCACA CTCAGCATCACCTTCTCCGGGGGTCAATTGATCCTCAGCGCCATTTCCCTCTGGAATGAGGACTTTGTCGCCAAT ACCTGGCAGACCATTCTCATGTTCTGGGCTGTGATTGGGGCCTGTGCCTTGGTGAATATCTTCTTCTCCAAGTGG CTGGATCTGATCAATAAGGTGTGCATTTATTGGACCGCCGCAAGTGTCGTGATTATTCTCGTTACGCTTTTGACG ATGGCGGATGAGAGACGCGATGCCGAGTTTGTCTTTGCCCATTATGATGCTTCGCAGAGTGGGTGGCCTGCTGGA TGGGCGTTCTTTGTCGGACTGCTGCAGGCAGCATACACACTCACTGGCTACGGCATGGTGGCTGCCATGTGTGAG GAAGTGCAGAACCCGCATCGGGAGGTCCCCAAGGCCATTGTGCTATCAGTGGTGGCGGCCGGTATCACGGGTCTG GTCTACCTGATCCCCATCATGTTTGTTCTGCCCCCGGTGGAGACCCTTTTGGCTGTGGCCAGCGGCCAGCCCATC GGACTCATCTTCAAGACAGCCACCGGCTCCGCCGGCGGAGGCTTCGGGCTGCTGTTCCTGGTGCTGGGCATCCTG GTGTTTGCGGGGATTGGCGCATTGACGGCTGCCAGTCGATGCACGTATGCCTTTGCTCGTGACGGAGCTATCCCC GGCTTCCGGCTCTGGAGGCAAGTGAACCCGAAGTTAGATGTGCCCGTGTGGGCCATCATCCTCTCCACCGTAGTC GATTGCCTGCTAGGGCTGATCTACTTCGGGTCCTCGGCGGCCTTCAACTCGTTTACGGGCGTGGCCACCATCTGC TTGTCCATCTCGTATGGTCTTCCCATTTTCATTTGCGTGCTGCGCGGGCGTGAAGCCGTCAAGGAATCCAGCTTC TCGCTGGGGCGATTCGGATACGCGATTAACATCGTATCCATCTGCTGGATTTGCCTGGCTGTGGTGCTCTTCTGC ATGCCCACCTCGCTGCCGGTGGATGCGAGTAGCATGAATTATGCGAGTGTGGTGTTTGCCGGTTTCGCGGCGATC AGTATCGGGTGGTATGTGGTCTACGCGCGCAAGCATTTCACTGGTCCACCTGTCACGGACGAAGATATGCCCGGC GTGATGACGGGGAAACCAATCGATACGGAGAATACTTATGCGGCGCATGAGAAAGCGGGGAAGGAATGA |
| Transcript | >Ani_SJS100_1|g7221.t1 ATGCGACAACCTTCCATGGATGCCAACGCCGATGAGGCGTTGGCTAGAATGGGTTACAAGAGTGAATTGCCTCGC AATTTGAGTATGATGAGTATTCTGGGCCTTTCCTTCGCCATCATGGCCGCCCCCTTCGGCCTCAGCACCACCCTC TACATCACCCTCACCGACGGCCAATCCGTCAGCGTCATCTGGGGCTGGGTCGTCGTCACCCTCATCTCCATCGCC ATTGCCGCCTCGCTGGCCGAGATCTGCGCCGTCTACCCCACCGCCGGCGGAGTCTACTACTGGAGTGCCATGCTC TCCACGCGGAAATGGGCTCCCGCCATGTCCTTCATCGATGGCTGGCTCACCCTCGTTGGCAATTGGACCGTCACA CTCAGCATCACCTTCTCCGGGGGTCAATTGATCCTCAGCGCCATTTCCCTCTGGAATGAGGACTTTGTCGCCAAT ACCTGGCAGACCATTCTCATGTTCTGGGCTGTGATTGGGGCCTGTGCCTTGGTGAATATCTTCTTCTCCAAGTGG CTGGATCTGATCAATAAGGTGTGCATTTATTGGACCGCCGCAAGTGTCGTGATTATTCTCGTTACGCTTTTGACG ATGGCGGATGAGAGACGCGATGCCGAGTTTGTCTTTGCCCATTATGATGCTTCGCAGAGTGGGTGGCCTGCTGGA TGGGCGTTCTTTGTCGGACTGCTGCAGGCAGCATACACACTCACTGGCTACGGCATGGTGGCTGCCATGTGTGAG GAAGTGCAGAACCCGCATCGGGAGGTCCCCAAGGCCATTGTGCTATCAGTGGTGGCGGCCGGTATCACGGGTCTG GTCTACCTGATCCCCATCATGTTTGTTCTGCCCCCGGTGGAGACCCTTTTGGCTGTGGCCAGCGGCCAGCCCATC GGACTCATCTTCAAGACAGCCACCGGCTCCGCCGGCGGAGGCTTCGGGCTGCTGTTCCTGGTGCTGGGCATCCTG GTGTTTGCGGGGATTGGCGCATTGACGGCTGCCAGTCGATGCACGTATGCCTTTGCTCGTGACGGAGCTATCCCC GGCTTCCGGCTCTGGAGGCAAGTGAACCCGAAGTTAGATGTGCCCGTGTGGGCCATCATCCTCTCCACCGTAGTC GATTGCCTGCTAGGGCTGATCTACTTCGGGTCCTCGGCGGCCTTCAACTCGTTTACGGGCGTGGCCACCATCTGC TTGTCCATCTCGTATGGTCTTCCCATTTTCATTTGCGTGCTGCGCGGGCGTGAAGCCGTCAAGGAATCCAGCTTC TCGCTGGGGCGATTCGGATACGCGATTAACATCGTATCCATCTGCTGGATTTGCCTGGCTGTGGTGCTCTTCTGC ATGCCCACCTCGCTGCCGGTGGATGCGAGTAGCATGAATTATGCGAGTGTGGTGTTTGCCGGTTTCGCGGCGATC AGTATCGGGTGGTATGTGGTCTACGCGCGCAAGCATTTCACTGGTCCACCTGTCACGGACGAAGATATGCCCGGC GTGATGACGGGGAAACCAATCGATACGGAGAATACTTATGCGGCGCATGAGAAAGCGGGGAAGGAATGA |
| Gene | >Ani_SJS100_1|g7221.t1 ATGCGACAACCTTCCATGGATGCCAACGCCGATGAGGCGTTGGCTAGAATGGGTTACAAGAGTGAATTGCCTCGC AATTTGAGTATGATGAGTATTCTGGGCCTGTATGTTCCCATTCTCCAGCACGTTGTACCCAGTAGCGATGGCCAT ACTCATGAAATCACTGTATCCCACAGTTCCTTCGCCATCATGGCCGCCCCCTTCGGCCTCAGCACCACCCTCTAC ATCACCCTCACCGACGGCCAATCCGTCAGCGTCATCTGGGGCTGGGTCGTCGTCACCCTCATCTCCATCGCCATT GCCGCCTCGCTGGCCGAGATCTGCGCCGTCTACCCCACCGCCGGCGGAGTCTACTACTGGAGTGCCATGCTCTCC ACGCGGAAATGGGCTCCCGCCATGTCCTTCATCGATGGCTGGCTCACCCTCGTTGGCAATTGGACCGTCACACTC AGCATCACCTTCTCCGGGGGTCAATTGATCCTCAGCGCCATTTCCCTCTGGAATGAGGACTTTGTCGCCAATACC TGGCAGACCATTCTCATGTTCTGGGCTGTGATTGGGGCCTGTGCCTTGGTGAATATCTTCTTCTCCAAGTGGCTG GATCTGATCAATAAGGTGTGCATTTATTGGACCGCCGCAAGTGTCGTGATTATTCTCGTTACGCTTTTGACGATG GCGGATGAGAGACGCGATGCCGAGTTTGTCTTTGCCCATTATGATGCTTCGCAGAGTGGGTGGTATGTTCCCCCC TTTTTTCTCTCTTCTTTTTCTTTCTCGATGGGGCTGATGACTTCTTAGGCCTGCTGGATGGGCGTTCTTTGTCGG ACTGCTGCAGGCAGCATACACACTCACTGGCTACGGCATGGTGGCTGCCATGTGTGAGGAAGTGCAGAACCCGCA TCGGGAGGTCCCCAAGGCCATTGTGCTATCAGTGGTGGCGGCCGGTATCACGGGTCTGGTCTACCTGATCCCCAT CATGTTTGTTCTGCCCCCGGTGGAGACCCTTTTGGCTGTGGCCAGCGGCCAGCCCATCGGACTCATCTTCAAGAC AGCCACCGGCTCCGCCGGCGGAGGCTTCGGGCTGCTGTTCCTGGTGCTGGGCATCCTGGTGTTTGCGGGGATTGG CGCATTGACGGCTGCCAGTCGATGCACGTATGCCTTTGCTCGTGACGGAGCTATCCCCGGCTTCCGGCTCTGGAG GCAAGTGAACCCGAAGTTAGATGTGCCCGTGTGGGCCATCATCCTCTCCACCGTAGTCGATTGCCTGCTAGGGCT GATCTACTTCGGGTCCTCGGCGGCCTTCAACTCGTTTACGGGCGTGGCCACCATCTGCTTGTCCATCTCGTATGG TCTTCCCATTTTCATTTGCGTGCTGCGCGGGCGTGAAGCCGTCAAGGAATCCAGCTTCTCGCTGGGGCGATTCGG ATACGCGATTAACATCGTATCCATCTGCTGGATTTGCCTGGCTGTGGTGCTCTTCTGCATGCCCACCTCGCTGCC GGTGGATGCGAGTAGCATGAATTATGCGAGTGTGGTGTTTGCCGGTTTCGCGGCGATCAGTATCGGGTGGTATGT GGTCTACGCGCGCAAGCATTTCACTGGTCCACCTGTCACGGACGAAGATATGCCCGGCGTGATGACGGGGAAACC AATCGATACGGAGAATACTTATGCGGCGCATGAGAAAGCGGGGAAGGAATGA |