Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g7211.t1
Gene name
Locationscaffold_049:141252..143061
Strand-
Gene length (bp)1809
Transcript length (bp)1734
Coding sequence length (bp)1734
Protein length (aa) 578

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08423 Rad51 Rad51 6.8E-40 105 288
PF06745 ATPase KaiC 3.5E-08 110 238
PF13481 AAA_25 AAA domain 6.4E-07 100 280

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g7211.t1
MDLLSVLPDFPTKPYAHILPPLERSHISTVDLITLDTLEVAKRARVPPADVRRLSAQIIRALHNDVGFKENRDPD
ADEPSSSLSVDVPVFPGPTTKLDLFQWSAISTLDPTLDALLDGGIPTGYVTEVTGESGSGKTQFLLTLLLAAQLP
APRGLDKCAIYISTEAPLSTPRLSQLIEFHPYLSSLSQAHTPSLEKILSINAMDLEAQDHILNYQLPVAIKRYNV
GLVVIDSITANYRAEHSSHNLSGLSTRSGELSRLGHMLRNLAVEENVAVVVANQVSDRIEAAGRHPTLIRSNGGV
ISSIPSTQQQVPSSRHELEAVTPLPRNRPLESRNVELTPHNPILQSSPSSLPSSPYTTEDDPQQQQFDGSYLIGN
PVRNEILSLLHQQRFFTGWGDTLQPTISSLYPAFQQAAQKTPALGLVWSTQIACRIALKKETRFVDWEAILEDTF
VSSEQHLLPTAREQANEPPDSRVAMENEEQSRAHHPAVCAPPDETDAVDDKTNLDVPNTVRDDHAATGQSSPLSS
QAVTQGVRRTMKLVFAPWTAGPVTEQGEIQHEAEFEIWKGGLRGCTEDFDTI*
Coding >Ani_SJS100_1|g7211.t1
ATGGATCTTTTGTCGGTCCTTCCGGACTTCCCTACCAAGCCATATGCTCATATTCTCCCACCTCTTGAGCGGAGC
CATATCAGCACGGTCGACTTGATCACTCTCGACACTCTCGAAGTCGCAAAGCGTGCTCGTGTTCCTCCCGCCGAT
GTCCGCCGATTGTCCGCTCAGATCATAAGAGCACTCCACAATGATGTCGGTTTCAAGGAGAACAGAGATCCCGAT
GCTGATGAGCCGAGCTCCAGCCTCAGTGTTGATGTTCCTGTCTTCCCAGGCCCGACGACCAAGCTAGATCTATTC
CAGTGGAGTGCGATTAGTACACTCGACCCCACGTTAGACGCACTGCTTGATGGCGGCATACCGACGGGTTATGTG
ACCGAGGTGACTGGTGAGAGTGGGAGTGGCAAGACGCAATTCCTTCTCACCCTTCTCCTGGCCGCCCAACTTCCT
GCACCCCGTGGTCTGGACAAGTGTGCCATATACATTTCCACAGAAGCTCCGTTATCGACGCCACGGCTTTCGCAG
CTCATTGAATTCCATCCTTATCTATCTTCCTTGTCGCAAGCTCACACGCCCTCGCTGGAGAAGATATTGTCTATC
AATGCCATGGATCTCGAGGCACAAGATCACATCCTCAACTACCAACTCCCTGTTGCAATCAAGCGATATAATGTC
GGATTGGTCGTCATTGACTCCATAACTGCAAATTACCGGGCAGAACATTCGTCCCATAATCTGTCGGGCTTGTCC
ACACGGTCTGGCGAGCTTTCCAGATTAGGCCACATGCTGAGGAACCTGGCTGTGGAGGAAAATGTCGCAGTTGTA
GTAGCGAACCAAGTTTCTGATCGCATTGAAGCTGCTGGCAGGCACCCAACACTAATACGTTCGAATGGCGGTGTC
ATCTCATCTATTCCTTCAACGCAACAGCAAGTGCCGTCGTCACGTCACGAGTTAGAAGCTGTTACACCGTTGCCA
CGAAATCGACCTCTTGAGTCCCGGAATGTCGAACTGACTCCTCATAACCCGATCCTTCAATCCTCTCCGTCTAGT
CTTCCCTCGTCACCGTACACCACAGAGGATGACCCGCAGCAGCAGCAGTTCGACGGGTCATACCTGATTGGCAAC
CCTGTACGAAACGAGATCTTGAGTCTTCTACACCAGCAGCGGTTCTTCACCGGGTGGGGTGACACGCTACAACCT
ACTATCTCAAGCCTGTACCCAGCTTTCCAACAAGCTGCACAGAAGACCCCTGCTCTAGGCTTGGTTTGGTCTACC
CAGATTGCATGTCGCATTGCACTGAAAAAGGAGACCCGCTTTGTGGATTGGGAGGCCATTCTAGAGGACACGTTT
GTCTCCAGCGAGCAGCATTTGCTGCCTACAGCAAGAGAGCAGGCCAATGAGCCCCCGGATTCACGAGTAGCAATG
GAGAATGAAGAACAATCTAGGGCACACCACCCTGCAGTCTGTGCACCACCGGACGAGACCGATGCAGTAGACGAT
AAGACGAATCTCGATGTCCCGAATACTGTCCGTGATGATCATGCAGCAACCGGGCAATCCTCACCATTGTCATCA
CAGGCAGTTACACAAGGCGTTCGAAGAACCATGAAACTTGTATTTGCCCCCTGGACTGCCGGCCCAGTCACAGAG
CAAGGCGAGATCCAACACGAGGCGGAGTTTGAAATCTGGAAGGGTGGGCTGAGGGGCTGTACAGAGGATTTTGAC
ACCATCTAG
Transcript >Ani_SJS100_1|g7211.t1
ATGGATCTTTTGTCGGTCCTTCCGGACTTCCCTACCAAGCCATATGCTCATATTCTCCCACCTCTTGAGCGGAGC
CATATCAGCACGGTCGACTTGATCACTCTCGACACTCTCGAAGTCGCAAAGCGTGCTCGTGTTCCTCCCGCCGAT
GTCCGCCGATTGTCCGCTCAGATCATAAGAGCACTCCACAATGATGTCGGTTTCAAGGAGAACAGAGATCCCGAT
GCTGATGAGCCGAGCTCCAGCCTCAGTGTTGATGTTCCTGTCTTCCCAGGCCCGACGACCAAGCTAGATCTATTC
CAGTGGAGTGCGATTAGTACACTCGACCCCACGTTAGACGCACTGCTTGATGGCGGCATACCGACGGGTTATGTG
ACCGAGGTGACTGGTGAGAGTGGGAGTGGCAAGACGCAATTCCTTCTCACCCTTCTCCTGGCCGCCCAACTTCCT
GCACCCCGTGGTCTGGACAAGTGTGCCATATACATTTCCACAGAAGCTCCGTTATCGACGCCACGGCTTTCGCAG
CTCATTGAATTCCATCCTTATCTATCTTCCTTGTCGCAAGCTCACACGCCCTCGCTGGAGAAGATATTGTCTATC
AATGCCATGGATCTCGAGGCACAAGATCACATCCTCAACTACCAACTCCCTGTTGCAATCAAGCGATATAATGTC
GGATTGGTCGTCATTGACTCCATAACTGCAAATTACCGGGCAGAACATTCGTCCCATAATCTGTCGGGCTTGTCC
ACACGGTCTGGCGAGCTTTCCAGATTAGGCCACATGCTGAGGAACCTGGCTGTGGAGGAAAATGTCGCAGTTGTA
GTAGCGAACCAAGTTTCTGATCGCATTGAAGCTGCTGGCAGGCACCCAACACTAATACGTTCGAATGGCGGTGTC
ATCTCATCTATTCCTTCAACGCAACAGCAAGTGCCGTCGTCACGTCACGAGTTAGAAGCTGTTACACCGTTGCCA
CGAAATCGACCTCTTGAGTCCCGGAATGTCGAACTGACTCCTCATAACCCGATCCTTCAATCCTCTCCGTCTAGT
CTTCCCTCGTCACCGTACACCACAGAGGATGACCCGCAGCAGCAGCAGTTCGACGGGTCATACCTGATTGGCAAC
CCTGTACGAAACGAGATCTTGAGTCTTCTACACCAGCAGCGGTTCTTCACCGGGTGGGGTGACACGCTACAACCT
ACTATCTCAAGCCTGTACCCAGCTTTCCAACAAGCTGCACAGAAGACCCCTGCTCTAGGCTTGGTTTGGTCTACC
CAGATTGCATGTCGCATTGCACTGAAAAAGGAGACCCGCTTTGTGGATTGGGAGGCCATTCTAGAGGACACGTTT
GTCTCCAGCGAGCAGCATTTGCTGCCTACAGCAAGAGAGCAGGCCAATGAGCCCCCGGATTCACGAGTAGCAATG
GAGAATGAAGAACAATCTAGGGCACACCACCCTGCAGTCTGTGCACCACCGGACGAGACCGATGCAGTAGACGAT
AAGACGAATCTCGATGTCCCGAATACTGTCCGTGATGATCATGCAGCAACCGGGCAATCCTCACCATTGTCATCA
CAGGCAGTTACACAAGGCGTTCGAAGAACCATGAAACTTGTATTTGCCCCCTGGACTGCCGGCCCAGTCACAGAG
CAAGGCGAGATCCAACACGAGGCGGAGTTTGAAATCTGGAAGGGTGGGCTGAGGGGCTGTACAGAGGATTTTGAC
ACCATCTAG
Gene >Ani_SJS100_1|g7211.t1
ATGGATCTTTTGTCGGTCCTTCCGGACTTCCCTACCAAGCCATATGCTCATATTCTCCCACCTCTTGAGCGGAGC
CATATCAGCACGGTCGACTTGATCACTCTCGACACTCTCGAAGTCGCAAAGCGTGCTCGTGTTCCTCCCGCCGAT
GTCCGCCGATTGTCCGCTCAGATCATAAGAGCACTCCACAATGATGTCGGTTTCAAGGAGAACAGAGATCCCGAT
GCTGATGAGCCGAGCTCCAGCCTCAGTGTTGATGTTCCTGTCTTCCCAGGCCCGACGACCAAGCTAGATCTATTC
CAGTGGAGTGCGATTAGTACACTCGACCCCACGTTAGACGCACTGCTTGATGGCGGCATACCGACGGGTTATGTG
ACCGAGGTGACTGGTGAGAGGTGCGTATACTCGCTCCCCAGAGTGAGTCCGTCCGTATTCGAGGCGTCCTGACCT
AATGGGCTAATCGGTCACAGTGGGAGTGGCAAGACGCAATTCCTTCTCACCCTTCTCCTGGCCGCCCAACTTCCT
GCACCCCGTGGTCTGGACAAGTGTGCCATATACATTTCCACAGAAGCTCCGTTATCGACGCCACGGCTTTCGCAG
CTCATTGAATTCCATCCTTATCTATCTTCCTTGTCGCAAGCTCACACGCCCTCGCTGGAGAAGATATTGTCTATC
AATGCCATGGATCTCGAGGCACAAGATCACATCCTCAACTACCAACTCCCTGTTGCAATCAAGCGATATAATGTC
GGATTGGTCGTCATTGACTCCATAACTGCAAATTACCGGGCAGAACATTCGTCCCATAATCTGTCGGGCTTGTCC
ACACGGTCTGGCGAGCTTTCCAGATTAGGCCACATGCTGAGGAACCTGGCTGTGGAGGAAAATGTCGCAGTTGTA
GTAGCGAACCAAGTTTCTGATCGCATTGAAGCTGCTGGCAGGCACCCAACACTAATACGTTCGAATGGCGGTGTC
ATCTCATCTATTCCTTCAACGCAACAGCAAGTGCCGTCGTCACGTCACGAGTTAGAAGCTGTTACACCGTTGCCA
CGAAATCGACCTCTTGAGTCCCGGAATGTCGAACTGACTCCTCATAACCCGATCCTTCAATCCTCTCCGTCTAGT
CTTCCCTCGTCACCGTACACCACAGAGGATGACCCGCAGCAGCAGCAGTTCGACGGGTCATACCTGATTGGCAAC
CCTGTACGAAACGAGATCTTGAGTCTTCTACACCAGCAGCGGTTCTTCACCGGGTGGGGTGACACGCTACAACCT
ACTATCTCAAGCCTGTACCCAGCTTTCCAACAAGCTGCACAGAAGACCCCTGCTCTAGGCTTGGTTTGGTCTACC
CAGATTGCATGTCGCATTGCACTGAAAAAGGAGACCCGCTTTGTGGATTGGGAGGCCATTCTAGAGGACACGTTT
GTCTCCAGCGAGCAGCATTTGCTGCCTACAGCAAGAGAGCAGGCCAATGAGCCCCCGGATTCACGAGTAGCAATG
GAGAATGAAGAACAATCTAGGGCACACCACCCTGCAGTCTGTGCACCACCGGACGAGACCGATGCAGTAGACGAT
AAGACGAATCTCGATGTCCCGAATACTGTCCGTGATGATCATGCAGCAACCGGGCAATCCTCACCATTGTCATCA
CAGGCAGTTACACAAGGCGTTCGAAGAACCATGAAACTTGTATTTGCCCCCTGGACTGCCGGCCCAGTCACAGAG
CAAGGCGAGATCCAACACGAGGCGGAGTTTGAAATCTGGAAGGGTGGGCTGAGGGGCTGTACAGAGGATTTTGAC
ACCATCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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