Protein ID | Ani_SJS100_1|g7210.t1 |
Gene name | |
Location | scaffold_049:138844..140307 |
Strand | + |
Gene length (bp) | 1463 |
Transcript length (bp) | 1401 |
Coding sequence length (bp) | 1401 |
Protein length (aa) | 467 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00487 | FA_desaturase | Fatty acid desaturase | 2.3E-23 | 126 | 414 |
GO Term | Description | Terminal node |
---|---|---|
GO:0006629 | lipid metabolic process | Yes |
GO:0008150 | biological_process | No |
GO:0044238 | primary metabolic process | No |
GO:0008152 | metabolic process | No |
GO:0071704 | organic substance metabolic process | No |
Domain # | Start | End | Length |
---|---|---|---|
1 | 91 | 108 | 17 |
2 | 123 | 145 | 22 |
3 | 289 | 308 | 19 |
4 | 312 | 334 | 22 |
Orthofinder run ID | 3 |
Orthogroup | 7442 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g7210.t1 MSSTALPKRVALHRNATDSSVPSSVTPSPLDSPRQSPSTTSLSSLASEAEASGKMLDTYGNEFKIPDYTIKQIRD AIPAHCYERKALTSLYYVFRDVFWLATIFYVFHNYVTPETVPYKPARVVLWALYTIVQGLFGTGVWVLAHECGHQ AFSPSKVLNDTVGWICHSALLVPYFSWKISHGKHHKATGNIARDMVFVPKTRDQYASRVGKAMHELNELMEETPI ATALNLLLQQLFGWPMYLLTNVTGHNNHERQPEGRGKGKQNGYFGGVNHFNPSSPLYEAKDAKLIVLSDIGLAIV GSILYLVGSKYGWMNLLVWYGIPYLWVNHWLVAITYLQHTDPTLPHYQPDVWNFARGAAATIDRDFGFVGRHIFH GIIETHVLHHYVSTIPFYNADEASEAIKKVMGSHYRTEAHTGWTGFFKALWTSARVCHWVEPTEGAKGESSGVLF YRNTNGIGVPPAKLEK* |
Coding | >Ani_SJS100_1|g7210.t1 ATGTCTTCCACAGCTCTCCCCAAGCGCGTTGCGCTGCACCGCAATGCTACGGACTCGTCCGTCCCCAGCTCGGTC ACCCCCTCCCCGCTGGACAGCCCTCGCCAGTCCCCTTCGACCACTTCCCTGTCGTCGTTGGCGTCGGAGGCAGAG GCCAGCGGCAAGATGCTGGATACCTATGGCAACGAGTTCAAGATCCCGGATTATACCATCAAGCAGATCCGTGAT GCCATTCCCGCTCATTGCTATGAGCGCAAAGCTCTCACCAGCTTGTACTATGTCTTCCGGGATGTCTTCTGGCTC GCGACCATCTTCTATGTCTTCCACAACTACGTGACCCCTGAGACCGTCCCTTACAAGCCCGCAAGAGTCGTGCTG TGGGCTCTTTACACCATCGTGCAGGGTCTGTTCGGTACCGGTGTCTGGGTTTTGGCTCACGAGTGCGGCCACCAG GCTTTCTCTCCGTCCAAGGTTCTCAACGACACTGTTGGTTGGATCTGCCATTCCGCCCTGCTGGTGCCCTACTTC TCCTGGAAGATCTCCCACGGAAAGCACCACAAGGCCACCGGTAACATTGCTCGCGACATGGTGTTCGTGCCCAAG ACCCGGGACCAGTATGCCTCTCGCGTCGGCAAGGCTATGCACGAACTCAATGAGTTGATGGAGGAAACTCCCATC GCCACTGCCCTCAACCTCCTTCTCCAGCAGCTCTTCGGTTGGCCCATGTACCTGCTCACCAACGTCACCGGTCAC AACAACCATGAACGTCAGCCTGAGGGTCGTGGAAAGGGCAAGCAGAACGGCTACTTCGGCGGTGTCAACCACTTC AACCCATCTAGCCCTCTGTACGAGGCCAAGGATGCGAAGCTGATTGTCCTGAGTGACATCGGTCTTGCCATTGTC GGGAGCATTCTGTACTTGGTCGGCTCCAAGTACGGCTGGATGAACCTTCTGGTTTGGTACGGTATCCCCTACCTC TGGGTGAACCACTGGCTGGTCGCCATCACCTACCTCCAGCACACCGATCCCACTCTCCCCCACTACCAGCCTGAT GTCTGGAACTTCGCCCGCGGTGCCGCCGCCACCATCGACCGTGACTTCGGCTTCGTCGGCCGTCACATCTTCCAC GGTATCATTGAGACCCACGTTCTCCACCACTATGTCAGCACCATCCCCTTCTACAACGCCGATGAGGCCAGCGAG GCCATCAAGAAGGTCATGGGATCTCACTACCGGACCGAAGCCCACACTGGCTGGACCGGATTCTTCAAGGCTCTC TGGACTAGTGCCCGTGTGTGCCACTGGGTTGAGCCCACTGAGGGCGCCAAGGGTGAGAGCTCTGGAGTGCTCTTC TACCGTAACACGAACGGCATTGGAGTTCCTCCTGCCAAGCTTGAAAAATAG |
Transcript | >Ani_SJS100_1|g7210.t1 ATGTCTTCCACAGCTCTCCCCAAGCGCGTTGCGCTGCACCGCAATGCTACGGACTCGTCCGTCCCCAGCTCGGTC ACCCCCTCCCCGCTGGACAGCCCTCGCCAGTCCCCTTCGACCACTTCCCTGTCGTCGTTGGCGTCGGAGGCAGAG GCCAGCGGCAAGATGCTGGATACCTATGGCAACGAGTTCAAGATCCCGGATTATACCATCAAGCAGATCCGTGAT GCCATTCCCGCTCATTGCTATGAGCGCAAAGCTCTCACCAGCTTGTACTATGTCTTCCGGGATGTCTTCTGGCTC GCGACCATCTTCTATGTCTTCCACAACTACGTGACCCCTGAGACCGTCCCTTACAAGCCCGCAAGAGTCGTGCTG TGGGCTCTTTACACCATCGTGCAGGGTCTGTTCGGTACCGGTGTCTGGGTTTTGGCTCACGAGTGCGGCCACCAG GCTTTCTCTCCGTCCAAGGTTCTCAACGACACTGTTGGTTGGATCTGCCATTCCGCCCTGCTGGTGCCCTACTTC TCCTGGAAGATCTCCCACGGAAAGCACCACAAGGCCACCGGTAACATTGCTCGCGACATGGTGTTCGTGCCCAAG ACCCGGGACCAGTATGCCTCTCGCGTCGGCAAGGCTATGCACGAACTCAATGAGTTGATGGAGGAAACTCCCATC GCCACTGCCCTCAACCTCCTTCTCCAGCAGCTCTTCGGTTGGCCCATGTACCTGCTCACCAACGTCACCGGTCAC AACAACCATGAACGTCAGCCTGAGGGTCGTGGAAAGGGCAAGCAGAACGGCTACTTCGGCGGTGTCAACCACTTC AACCCATCTAGCCCTCTGTACGAGGCCAAGGATGCGAAGCTGATTGTCCTGAGTGACATCGGTCTTGCCATTGTC GGGAGCATTCTGTACTTGGTCGGCTCCAAGTACGGCTGGATGAACCTTCTGGTTTGGTACGGTATCCCCTACCTC TGGGTGAACCACTGGCTGGTCGCCATCACCTACCTCCAGCACACCGATCCCACTCTCCCCCACTACCAGCCTGAT GTCTGGAACTTCGCCCGCGGTGCCGCCGCCACCATCGACCGTGACTTCGGCTTCGTCGGCCGTCACATCTTCCAC GGTATCATTGAGACCCACGTTCTCCACCACTATGTCAGCACCATCCCCTTCTACAACGCCGATGAGGCCAGCGAG GCCATCAAGAAGGTCATGGGATCTCACTACCGGACCGAAGCCCACACTGGCTGGACCGGATTCTTCAAGGCTCTC TGGACTAGTGCCCGTGTGTGCCACTGGGTTGAGCCCACTGAGGGCGCCAAGGGTGAGAGCTCTGGAGTGCTCTTC TACCGTAACACGAACGGCATTGGAGTTCCTCCTGCCAAGCTTGAAAAATAG |
Gene | >Ani_SJS100_1|g7210.t1 ATGTCTTCCACAGCTCTCCCCAAGCGCGTTGCGCTGCACCGCAATGCTACGGACTCGTCCGTCCCCAGCTCGGTC ACCCCCTCCCCGCTGGACAGCCCTCGCCAGTCCCCTTCGACCACTTCCCTGTCGTCGTTGGCGTCGGAGGCAGAG GCCAGCGGCAAGATGCTGGATACCTATGGCAACGAGTTCAAGATCCCGGATTATACCATCAAGCAGATCCGTGAT GCCATTCCCGCTCATTGCTATGAGCGCAAAGCTCTCACCAGCTTGTACTATGTCTTCCGGGATGTCTTCTGGCTC GCGACCATCTTCTATGTCTTCCACAACTACGTGACCCCTGAGACCGTCCCTTACAAGCCCGCAAGAGTCGTGCTG TGGGCTCTTTACACCATCGTGCAGGGTCTGTTCGGTACCGGTGTCTGGGTTTTGGCTCACGAGTGCGGCCACCAG GCTTTCTCTCCGTCCAAGGTTCTCAACGACACTGTTGGTTGGATCTGCCATTCCGCCCTGCTGGTGCCCTACTTC TCCTGGAAGATCTCCCACGGAAAGCACCACAAGGCCACCGGTAACATTGCTCGCGACATGGTGTTCGTGCCCAAG ACCCGGGACCAGTATGCCTCTCGCGTCGGCAAGGCTATGCACGAACTCAATGAGTTGATGGAGGAAACTCCCATC GCCACTGCCCTCAACCTCCTTCTCCAGCAGCTCTTCGGTTGGCCCATGTACCTGCTCACCAACGTCACCGGTCAC AACAACCATGAACGTCAGCCTGAGGGTCGTGGAAAGGGCAAGCAGAACGGCTACTTCGGCGGTGTCAACCACTTC AACCCATCTAGCCCTCTGTACGAGGCCAAGGATGCGAAGCTGATTGTCCTGAGTGACATCGGTCTTGCCATTGTC GGGAGCATTCTGTACTTGGTCGGCTCCAAGTACGGCTGGATGAACCTTCTGGTTTGGTACGGTATCCCCTACCTC TGGGTGAACCACTGGCTGGGTAAGTTACTTTCTTCACAAACTGGCACAATTGCTGGAACGAATACTGACCTAAAG ATATAGTCGCCATCACCTACCTCCAGCACACCGATCCCACTCTCCCCCACTACCAGCCTGATGTCTGGAACTTCG CCCGCGGTGCCGCCGCCACCATCGACCGTGACTTCGGCTTCGTCGGCCGTCACATCTTCCACGGTATCATTGAGA CCCACGTTCTCCACCACTATGTCAGCACCATCCCCTTCTACAACGCCGATGAGGCCAGCGAGGCCATCAAGAAGG TCATGGGATCTCACTACCGGACCGAAGCCCACACTGGCTGGACCGGATTCTTCAAGGCTCTCTGGACTAGTGCCC GTGTGTGCCACTGGGTTGAGCCCACTGAGGGCGCCAAGGGTGAGAGCTCTGGAGTGCTCTTCTACCGTAACACGA ACGGCATTGGAGTTCCTCCTGCCAAGCTTGAAAAATAG |