Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g7196.t1
Gene name
Locationscaffold_049:87300..88284
Strand-
Gene length (bp)984
Transcript length (bp)870
Coding sequence length (bp)870
Protein length (aa) 290

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04991 LicD LicD family 1.0E-18 101 208
PF04991 LicD LicD family 3.5E-05 216 253

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g7196.t1
MNPRGLLAVLTCAIWSAVATARPSPAEHSNHGSFVNRNDPDPLWQKYGLNKSDEFKYFHEPGRDDTLGHYDSRFF
QGEPVPDAERSITLTHMIRAYLNFFEDNGLETWIAHGTLLGWWWNGKIMPWDWDIDTQVMDTTLFHLADHFNQTV
VQYTTTDPDVERRYLLDINPWARQRDRGMGLNIIDARWIDISTGLYIDITGLSRLTAEKPTEWECKNGHKYQTHD
IYPLRRSTFEGVPAKVPFRYDGVLTEEYTKKALTNTQFHNHTWDAELEEWVLDVPAAMDDRQYE*
Coding >Ani_SJS100_1|g7196.t1
ATGAACCCTCGGGGCCTGCTGGCCGTCCTCACCTGCGCGATCTGGTCAGCAGTGGCCACAGCACGCCCCAGCCCC
GCAGAGCACAGTAACCACGGCAGTTTCGTCAACCGCAATGACCCAGACCCGCTGTGGCAGAAGTACGGGCTGAAC
AAGTCAGACGAATTCAAGTATTTCCATGAGCCAGGTCGTGACGATACCTTGGGCCACTATGACTCGCGATTTTTC
CAGGGGGAGCCGGTTCCGGACGCGGAGCGATCTATCACATTGACGCATATGATCCGAGCATATCTGAACTTCTTT
GAGGATAATGGATTGGAAACATGGATTGCGCATGGAACATTGCTGGGGTGGTGGTGGAATGGCAAGATCATGCCC
TGGGACTGGGACATCGACACTCAAGTCATGGACACCACACTATTCCATCTCGCCGACCACTTCAATCAGACTGTT
GTCCAGTATACCACTACCGACCCCGACGTCGAACGCCGGTACCTCCTCGATATAAACCCGTGGGCGCGCCAGCGT
GATCGCGGCATGGGACTGAATATAATTGATGCGCGTTGGATCGACATCAGCACGGGGCTATACATCGATATCACA
GGGCTAAGCCGACTGACGGCCGAAAAGCCCACAGAATGGGAGTGCAAGAATGGGCACAAATATCAGACACACGAT
ATCTATCCACTGCGGAGATCGACGTTTGAGGGCGTGCCAGCCAAGGTGCCATTTAGGTACGATGGGGTGCTAACA
GAAGAGTATACAAAGAAGGCGTTGACCAACACGCAATTTCACAATCATACGTGGGATGCGGAACTCGAAGAGTGG
GTGCTGGATGTGCCGGCCGCAATGGACGACCGGCAGTATGAGTGA
Transcript >Ani_SJS100_1|g7196.t1
ATGAACCCTCGGGGCCTGCTGGCCGTCCTCACCTGCGCGATCTGGTCAGCAGTGGCCACAGCACGCCCCAGCCCC
GCAGAGCACAGTAACCACGGCAGTTTCGTCAACCGCAATGACCCAGACCCGCTGTGGCAGAAGTACGGGCTGAAC
AAGTCAGACGAATTCAAGTATTTCCATGAGCCAGGTCGTGACGATACCTTGGGCCACTATGACTCGCGATTTTTC
CAGGGGGAGCCGGTTCCGGACGCGGAGCGATCTATCACATTGACGCATATGATCCGAGCATATCTGAACTTCTTT
GAGGATAATGGATTGGAAACATGGATTGCGCATGGAACATTGCTGGGGTGGTGGTGGAATGGCAAGATCATGCCC
TGGGACTGGGACATCGACACTCAAGTCATGGACACCACACTATTCCATCTCGCCGACCACTTCAATCAGACTGTT
GTCCAGTATACCACTACCGACCCCGACGTCGAACGCCGGTACCTCCTCGATATAAACCCGTGGGCGCGCCAGCGT
GATCGCGGCATGGGACTGAATATAATTGATGCGCGTTGGATCGACATCAGCACGGGGCTATACATCGATATCACA
GGGCTAAGCCGACTGACGGCCGAAAAGCCCACAGAATGGGAGTGCAAGAATGGGCACAAATATCAGACACACGAT
ATCTATCCACTGCGGAGATCGACGTTTGAGGGCGTGCCAGCCAAGGTGCCATTTAGGTACGATGGGGTGCTAACA
GAAGAGTATACAAAGAAGGCGTTGACCAACACGCAATTTCACAATCATACGTGGGATGCGGAACTCGAAGAGTGG
GTGCTGGATGTGCCGGCCGCAATGGACGACCGGCAGTATGAGTGA
Gene >Ani_SJS100_1|g7196.t1
ATGAACCCTCGGGGCCTGCTGGCCGTCCTCACCTGCGCGATCTGGTCAGCAGTGGCCACAGCACGCCCCAGCCCC
GCAGAGCACAGTAACCACGGCAGTTTCGTCAACCGCAATGACCCAGACCCGCTGTGGCAGAAGTACGGGCTGAAC
AAGTCAGACGAATTCAAGTATTTCCATGAGCCAGGTCGTGACGATACCTTGGGCCACTATGACTCGCGATTTTTC
CAGGGGGAGCCGGTTCCGGACGCGGAGCGATCTATCACATTGACGCATATGATCCGAGCATATCTGAACTTCTTT
GAGGATAATGGATTGGAAACATGGATTGCGCATGGAACATTGCTGGGGTGGTGGTGGAATGGCAAGGTGGGCTAG
TCCTAATGCACCAGACATGGTTAGTTTTGGCCGTTTTAACCCTTCTTCTTTTCAGATCATGCCCTGGGACTGGGA
CATCGACACTCAAGTCATGGACACCACACTATTCCATCTCGCCGACCACTTCAATCAGACTGTTGTCCAGTATAC
CACTACCGACCCCGACGTCGAACGCCGGTACCTCCTCGATATAAACCCGTGGGCGCGCCAGCGTGATCGCGGCAT
GGGACTGAATATAATTGATGCGCGTTGGATCGACATCAGCACGGGGCTATACATCGATATCACAGGGCTAAGCCG
ACTGACGGCCGAAAAGCCCACAGAATGGGAGTGCAAGAATGGGCACAAATATCAGACACACGATATCTATCCACT
GCGGAGATCGACGTTTGAGGGCGTGCCAGCCAAGGTGCCATTTAGGTACGATGGGGTGCTAACAGAAGAGTATAC
AAAGAAGGCGTTGACCAACACGCAATTTCACAAGTGAGTAAATCCCCTCTAGCCGAGAGCCGCCTTATGCTGACA
TGTGATAGTCATACGTGGGATGCGGAACTCGAAGAGTGGGTGCTGGATGTGCCGGCCGCAATGGACGACCGGCAG
TATGAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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