© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g719.t1 |
| Gene name | |
| Location | scaffold_002:848368..849529 |
| Strand | - |
| Gene length (bp) | 1161 |
| Transcript length (bp) | 1161 |
| Coding sequence length (bp) | 1161 |
| Protein length (aa) | 387 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00368 | HMG-CoA_red | Hydroxymethylglutaryl-coenzyme A reductase | 6.2E-86 | 24 | 375 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0015936 | coenzyme A metabolic process | Yes |
| GO:0004420 | hydroxymethylglutaryl-CoA reductase (NADPH) activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0006163 | purine nucleotide metabolic process | No |
| GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | No |
| GO:0019693 | ribose phosphate metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0033865 | nucleoside bisphosphate metabolic process | No |
| GO:1901135 | carbohydrate derivative metabolic process | No |
| GO:0009259 | ribonucleotide metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0019637 | organophosphate metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0006793 | phosphorus metabolic process | No |
| GO:0033875 | ribonucleoside bisphosphate metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0009117 | nucleotide metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0006753 | nucleoside phosphate metabolic process | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:0034032 | purine nucleoside bisphosphate metabolic process | No |
| GO:0009150 | purine ribonucleotide metabolic process | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0055086 | nucleobase-containing small molecule metabolic process | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0044281 | small molecule metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | No |
| GO:0072521 | purine-containing compound metabolic process | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0006796 | phosphate-containing compound metabolic process | No |
| Orthofinder run ID | 3 |
| Orthogroup | 7419 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g719.t1 MAPPSEKTKAQFSQVLTGIEHITRHNQDPFKVKIENFIGYTHVPVGLAGPLHIRTPTGPDKEIWAPMATTEAAVV ASCCRGCKAANASGGIEVHMGEEGMTRCPVFQFQNPRDALRFARALPTLQASFKEVAESTSKHARLQSLTPHTIG RSVHLLFNYTCGDASGQNMVTIATDRVCAWVSKNLEKEYKIVDTFVEGMLSSDKKPSWRNVTVVRGVETVAWTAL SESACQRILGCSSAKLYDLIQITQDAAIRNGEHGSNMDSANILAAIFIATGQDAACVADASWAHLTPEYDQMSKT LKLSLYFPSMPVGVIGGGTSYATQQEGLRIMQCSEPGGKRRLAGYIAAFALALEISTASAVVTKTFARSHEQLAR WEASERPRSKI* |
| Coding | >Ani_SJS100_1|g719.t1 ATGGCCCCTCCTTCAGAAAAGACCAAGGCTCAATTCAGCCAGGTCCTCACCGGGATCGAACACATAACTCGGCAT AATCAGGACCCTTTCAAGGTAAAAATCGAAAACTTCATCGGCTATACGCACGTTCCTGTCGGATTAGCTGGGCCG CTACATATCCGAACGCCCACAGGGCCCGACAAGGAGATCTGGGCGCCCATGGCCACCACTGAGGCGGCGGTAGTC GCCAGCTGCTGTCGTGGATGCAAAGCTGCCAATGCCTCTGGTGGGATTGAAGTCCACATGGGAGAGGAAGGCATG ACGCGCTGCCCGGTCTTTCAGTTCCAGAATCCCAGAGATGCTTTACGATTTGCACGCGCACTGCCTACCCTCCAG GCATCGTTCAAAGAGGTGGCAGAAAGCACCAGCAAGCATGCTCGTCTACAGAGCCTAACGCCGCACACGATCGGG CGCTCTGTCCATCTCCTTTTCAACTACACCTGCGGTGATGCGTCGGGCCAGAACATGGTGACCATAGCTACAGAC CGGGTCTGTGCCTGGGTGTCGAAGAACCTAGAAAAGGAATATAAGATTGTGGATACGTTTGTAGAAGGCATGCTA TCCTCGGACAAGAAGCCATCGTGGAGGAATGTGACCGTCGTTCGGGGTGTCGAGACCGTGGCCTGGACAGCTCTA TCCGAATCGGCATGTCAGCGAATCCTGGGCTGTTCATCCGCAAAACTGTATGACTTAATACAGATCACCCAAGAC GCGGCGATTCGGAATGGCGAACATGGCAGTAATATGGACTCCGCCAATATATTGGCAGCAATTTTCATTGCTACG GGCCAGGATGCGGCGTGTGTCGCTGATGCTTCGTGGGCACACCTGACGCCGGAATACGATCAAATGTCCAAGACA CTAAAGTTGAGCCTTTATTTCCCCTCTATGCCTGTAGGGGTAATTGGCGGGGGCACGTCATACGCGACACAACAG GAAGGCTTGCGCATCATGCAGTGCAGTGAGCCCGGCGGTAAGCGACGACTGGCTGGGTACATTGCTGCGTTTGCT CTGGCGCTGGAGATCAGTACGGCTTCTGCGGTGGTGACGAAGACTTTTGCTCGCAGCCATGAGCAGTTAGCACGT TGGGAGGCTAGTGAGAGGCCAAGATCTAAGATCTGA |
| Transcript | >Ani_SJS100_1|g719.t1 ATGGCCCCTCCTTCAGAAAAGACCAAGGCTCAATTCAGCCAGGTCCTCACCGGGATCGAACACATAACTCGGCAT AATCAGGACCCTTTCAAGGTAAAAATCGAAAACTTCATCGGCTATACGCACGTTCCTGTCGGATTAGCTGGGCCG CTACATATCCGAACGCCCACAGGGCCCGACAAGGAGATCTGGGCGCCCATGGCCACCACTGAGGCGGCGGTAGTC GCCAGCTGCTGTCGTGGATGCAAAGCTGCCAATGCCTCTGGTGGGATTGAAGTCCACATGGGAGAGGAAGGCATG ACGCGCTGCCCGGTCTTTCAGTTCCAGAATCCCAGAGATGCTTTACGATTTGCACGCGCACTGCCTACCCTCCAG GCATCGTTCAAAGAGGTGGCAGAAAGCACCAGCAAGCATGCTCGTCTACAGAGCCTAACGCCGCACACGATCGGG CGCTCTGTCCATCTCCTTTTCAACTACACCTGCGGTGATGCGTCGGGCCAGAACATGGTGACCATAGCTACAGAC CGGGTCTGTGCCTGGGTGTCGAAGAACCTAGAAAAGGAATATAAGATTGTGGATACGTTTGTAGAAGGCATGCTA TCCTCGGACAAGAAGCCATCGTGGAGGAATGTGACCGTCGTTCGGGGTGTCGAGACCGTGGCCTGGACAGCTCTA TCCGAATCGGCATGTCAGCGAATCCTGGGCTGTTCATCCGCAAAACTGTATGACTTAATACAGATCACCCAAGAC GCGGCGATTCGGAATGGCGAACATGGCAGTAATATGGACTCCGCCAATATATTGGCAGCAATTTTCATTGCTACG GGCCAGGATGCGGCGTGTGTCGCTGATGCTTCGTGGGCACACCTGACGCCGGAATACGATCAAATGTCCAAGACA CTAAAGTTGAGCCTTTATTTCCCCTCTATGCCTGTAGGGGTAATTGGCGGGGGCACGTCATACGCGACACAACAG GAAGGCTTGCGCATCATGCAGTGCAGTGAGCCCGGCGGTAAGCGACGACTGGCTGGGTACATTGCTGCGTTTGCT CTGGCGCTGGAGATCAGTACGGCTTCTGCGGTGGTGACGAAGACTTTTGCTCGCAGCCATGAGCAGTTAGCACGT TGGGAGGCTAGTGAGAGGCCAAGATCTAAGATCTGA |
| Gene | >Ani_SJS100_1|g719.t1 ATGGCCCCTCCTTCAGAAAAGACCAAGGCTCAATTCAGCCAGGTCCTCACCGGGATCGAACACATAACTCGGCAT AATCAGGACCCTTTCAAGGTAAAAATCGAAAACTTCATCGGCTATACGCACGTTCCTGTCGGATTAGCTGGGCCG CTACATATCCGAACGCCCACAGGGCCCGACAAGGAGATCTGGGCGCCCATGGCCACCACTGAGGCGGCGGTAGTC GCCAGCTGCTGTCGTGGATGCAAAGCTGCCAATGCCTCTGGTGGGATTGAAGTCCACATGGGAGAGGAAGGCATG ACGCGCTGCCCGGTCTTTCAGTTCCAGAATCCCAGAGATGCTTTACGATTTGCACGCGCACTGCCTACCCTCCAG GCATCGTTCAAAGAGGTGGCAGAAAGCACCAGCAAGCATGCTCGTCTACAGAGCCTAACGCCGCACACGATCGGG CGCTCTGTCCATCTCCTTTTCAACTACACCTGCGGTGATGCGTCGGGCCAGAACATGGTGACCATAGCTACAGAC CGGGTCTGTGCCTGGGTGTCGAAGAACCTAGAAAAGGAATATAAGATTGTGGATACGTTTGTAGAAGGCATGCTA TCCTCGGACAAGAAGCCATCGTGGAGGAATGTGACCGTCGTTCGGGGTGTCGAGACCGTGGCCTGGACAGCTCTA TCCGAATCGGCATGTCAGCGAATCCTGGGCTGTTCATCCGCAAAACTGTATGACTTAATACAGATCACCCAAGAC GCGGCGATTCGGAATGGCGAACATGGCAGTAATATGGACTCCGCCAATATATTGGCAGCAATTTTCATTGCTACG GGCCAGGATGCGGCGTGTGTCGCTGATGCTTCGTGGGCACACCTGACGCCGGAATACGATCAAATGTCCAAGACA CTAAAGTTGAGCCTTTATTTCCCCTCTATGCCTGTAGGGGTAATTGGCGGGGGCACGTCATACGCGACACAACAG GAAGGCTTGCGCATCATGCAGTGCAGTGAGCCCGGCGGTAAGCGACGACTGGCTGGGTACATTGCTGCGTTTGCT CTGGCGCTGGAGATCAGTACGGCTTCTGCGGTGGTGACGAAGACTTTTGCTCGCAGCCATGAGCAGTTAGCACGT TGGGAGGCTAGTGAGAGGCCAAGATCTAAGATCTGA |