Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g7157.t1
Gene name
Locationscaffold_048:213862..214780
Strand-
Gene length (bp)918
Transcript length (bp)918
Coding sequence length (bp)918
Protein length (aa) 306

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 65 0.5

Transmembrane Domains

Domain # Start End Length
1 25 47 22
2 54 76 22
3 91 113 22
4 122 144 22
5 159 181 22
6 202 224 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g7157.t1
MLLKRDTPSGRLLPDIYRDSHQVHVFTAFAAIACYNAIELVILCLSTFKRRGSLYFWSLLVASLSIVPQCVGYIL
LFSRPQISPYGSATLIMVGWCGMITGHSLVLWSRLHLVLQDPTTLRYLLRLIILDDILLQIPITVLLYGTVSTQW
ELFNYGYNIMERIQLVGFCLQEGLLSGLYVWEAAKLLRLRPEDRHRRILAQLIGINILVLILDVAVVGIQYAGYY
ALQVMFKPVAYSIKLKLEYAILGRLVNVVKKVNTQESLSTQGFDMLPSSSEGLRPRLEPHVHGPGGFLHPQKVYT
SSRGS*
Coding >Ani_SJS100_1|g7157.t1
ATGCTCCTCAAACGCGACACCCCTTCAGGGCGCCTTCTTCCCGACATATACCGAGACTCCCACCAAGTCCACGTC
TTCACGGCCTTTGCCGCCATCGCCTGCTATAATGCCATTGAGCTCGTCATTCTCTGTCTCTCGACCTTCAAACGC
CGAGGAAGCCTTTACTTCTGGTCCCTTCTCGTTGCCTCCCTAAGCATCGTCCCGCAGTGCGTCGGGTATATCCTC
CTCTTCTCCCGACCCCAAATATCCCCCTACGGTTCCGCCACTCTTATCATGGTCGGCTGGTGCGGCATGATAACC
GGCCACTCACTCGTGCTCTGGTCCCGTCTCCATCTGGTTCTCCAGGACCCCACAACCCTTCGCTATCTTCTCCGT
CTAATCATCCTGGACGACATCCTCCTCCAAATCCCCATAACCGTTCTCTTATACGGCACCGTTTCCACGCAGTGG
GAACTCTTCAATTACGGGTACAATATCATGGAGCGGATCCAGCTCGTCGGCTTCTGTCTCCAAGAAGGTCTCCTG
TCGGGTCTGTATGTATGGGAGGCAGCGAAACTGCTACGACTTCGACCTGAAGACCGACATCGTCGTATCCTGGCG
CAGCTGATCGGGATCAATATCCTGGTCTTGATCCTTGATGTTGCCGTCGTCGGCATTCAGTATGCGGGCTACTAT
GCCTTGCAGGTCATGTTCAAGCCCGTCGCTTATAGCATTAAGCTGAAGCTGGAGTACGCTATCCTGGGTCGACTG
GTGAATGTTGTCAAGAAGGTCAACACCCAGGAGTCACTGAGTACGCAGGGCTTTGATATGCTGCCTTCGTCTTCG
GAGGGATTGAGACCGAGGCTGGAGCCCCATGTACATGGCCCTGGTGGCTTTCTGCACCCTCAGAAGGTGTATACT
TCGTCTCGTGGCTCATAA
Transcript >Ani_SJS100_1|g7157.t1
ATGCTCCTCAAACGCGACACCCCTTCAGGGCGCCTTCTTCCCGACATATACCGAGACTCCCACCAAGTCCACGTC
TTCACGGCCTTTGCCGCCATCGCCTGCTATAATGCCATTGAGCTCGTCATTCTCTGTCTCTCGACCTTCAAACGC
CGAGGAAGCCTTTACTTCTGGTCCCTTCTCGTTGCCTCCCTAAGCATCGTCCCGCAGTGCGTCGGGTATATCCTC
CTCTTCTCCCGACCCCAAATATCCCCCTACGGTTCCGCCACTCTTATCATGGTCGGCTGGTGCGGCATGATAACC
GGCCACTCACTCGTGCTCTGGTCCCGTCTCCATCTGGTTCTCCAGGACCCCACAACCCTTCGCTATCTTCTCCGT
CTAATCATCCTGGACGACATCCTCCTCCAAATCCCCATAACCGTTCTCTTATACGGCACCGTTTCCACGCAGTGG
GAACTCTTCAATTACGGGTACAATATCATGGAGCGGATCCAGCTCGTCGGCTTCTGTCTCCAAGAAGGTCTCCTG
TCGGGTCTGTATGTATGGGAGGCAGCGAAACTGCTACGACTTCGACCTGAAGACCGACATCGTCGTATCCTGGCG
CAGCTGATCGGGATCAATATCCTGGTCTTGATCCTTGATGTTGCCGTCGTCGGCATTCAGTATGCGGGCTACTAT
GCCTTGCAGGTCATGTTCAAGCCCGTCGCTTATAGCATTAAGCTGAAGCTGGAGTACGCTATCCTGGGTCGACTG
GTGAATGTTGTCAAGAAGGTCAACACCCAGGAGTCACTGAGTACGCAGGGCTTTGATATGCTGCCTTCGTCTTCG
GAGGGATTGAGACCGAGGCTGGAGCCCCATGTACATGGCCCTGGTGGCTTTCTGCACCCTCAGAAGGTGTATACT
TCGTCTCGTGGCTCATAA
Gene >Ani_SJS100_1|g7157.t1
ATGCTCCTCAAACGCGACACCCCTTCAGGGCGCCTTCTTCCCGACATATACCGAGACTCCCACCAAGTCCACGTC
TTCACGGCCTTTGCCGCCATCGCCTGCTATAATGCCATTGAGCTCGTCATTCTCTGTCTCTCGACCTTCAAACGC
CGAGGAAGCCTTTACTTCTGGTCCCTTCTCGTTGCCTCCCTAAGCATCGTCCCGCAGTGCGTCGGGTATATCCTC
CTCTTCTCCCGACCCCAAATATCCCCCTACGGTTCCGCCACTCTTATCATGGTCGGCTGGTGCGGCATGATAACC
GGCCACTCACTCGTGCTCTGGTCCCGTCTCCATCTGGTTCTCCAGGACCCCACAACCCTTCGCTATCTTCTCCGT
CTAATCATCCTGGACGACATCCTCCTCCAAATCCCCATAACCGTTCTCTTATACGGCACCGTTTCCACGCAGTGG
GAACTCTTCAATTACGGGTACAATATCATGGAGCGGATCCAGCTCGTCGGCTTCTGTCTCCAAGAAGGTCTCCTG
TCGGGTCTGTATGTATGGGAGGCAGCGAAACTGCTACGACTTCGACCTGAAGACCGACATCGTCGTATCCTGGCG
CAGCTGATCGGGATCAATATCCTGGTCTTGATCCTTGATGTTGCCGTCGTCGGCATTCAGTATGCGGGCTACTAT
GCCTTGCAGGTCATGTTCAAGCCCGTCGCTTATAGCATTAAGCTGAAGCTGGAGTACGCTATCCTGGGTCGACTG
GTGAATGTTGTCAAGAAGGTCAACACCCAGGAGTCACTGAGTACGCAGGGCTTTGATATGCTGCCTTCGTCTTCG
GAGGGATTGAGACCGAGGCTGGAGCCCCATGTACATGGCCCTGGTGGCTTTCTGCACCCTCAGAAGGTGTATACT
TCGTCTCGTGGCTCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail