Protein ID | Ani_SJS100_1|g7143.t1 |
Gene name | |
Location | scaffold_048:182723..184106 |
Strand | + |
Gene length (bp) | 1383 |
Transcript length (bp) | 1308 |
Coding sequence length (bp) | 1308 |
Protein length (aa) | 436 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00153 | Mito_carr | Mitochondrial carrier protein | 1.3E-21 | 99 | 188 |
PF00153 | Mito_carr | Mitochondrial carrier protein | 2.8E-17 | 195 | 317 |
PF00153 | Mito_carr | Mitochondrial carrier protein | 2.6E-16 | 343 | 431 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 48 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 404 | 426 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g7143.t1 MSAVISDHAQPDSSATGSDPSQFRPASPSSRNSQSPSPQMEQVAQSRPARGSTPGDTTDRLAVGTAQTTAVDDAS TPRPSQKSHGATQEVNKRSVDYLLRSGVAGGLAGCAAKTVVAPLDRVKILFQASNPQFAKYSGSWFGLISAVRDI RRHEGPRGLFKGHSATLLRIFPYAAIKFLAYEQIRAVVIPSRDKETPLRRLVSGSMAGMTSVFFTYPLELIRVRL AFETKRTSRSSFRDIIRQIYNERITMPSSTGASISEAPVTATAESVSSTVNKVVPRSGLANFYRGFGPTLMGMLP YAGISFLTHDTVGDWLKSPMLSPYTTIPEHEETGHPKKHHRQQLTAAAELFSGAIAGVVSQSSSYPFEVMRRRMQ VGGVVGDGHRLGIVETARMIFLERGFRGFWVGLTIGYLKVIPMTATGFFVYDRLKGRLGI* |
Coding | >Ani_SJS100_1|g7143.t1 ATGTCGGCTGTCATCTCGGACCATGCTCAGCCTGACTCTTCTGCTACCGGATCCGACCCCTCACAGTTCCGTCCT GCATCACCATCCTCAAGAAATTCGCAATCACCCTCTCCTCAGATGGAGCAAGTCGCACAGTCGAGACCGGCCCGA GGCTCGACACCAGGCGATACAACTGATCGCTTAGCCGTGGGTACGGCGCAGACGACGGCCGTCGATGATGCCTCC ACCCCGCGTCCATCGCAAAAGAGCCATGGCGCAACGCAAGAAGTCAACAAGCGGAGCGTGGACTACTTACTACGA AGTGGAGTGGCGGGGGGTTTGGCGGGATGTGCGGCCAAAACCGTTGTTGCTCCTCTCGATCGCGTTAAGATTCTG TTTCAAGCGTCCAATCCACAATTCGCTAAATACTCCGGTAGCTGGTTTGGCTTAATATCGGCTGTTCGCGATATC AGACGCCACGAGGGCCCTAGGGGTCTCTTCAAGGGCCACTCAGCGACATTACTCCGCATTTTCCCCTATGCCGCT ATCAAGTTCCTCGCCTACGAGCAAATTCGAGCAGTGGTGATTCCGTCGCGCGACAAAGAAACGCCTCTGCGCCGA CTTGTCTCTGGAAGCATGGCCGGCATGACGTCTGTCTTTTTTACGTATCCGTTAGAGCTTATTCGAGTACGCTTA GCATTTGAGACGAAACGCACGTCTCGCTCTTCATTCCGCGACATCATTCGACAGATTTACAACGAGCGGATCACT ATGCCATCATCGACGGGGGCATCAATATCGGAAGCCCCAGTGACCGCCACTGCAGAGAGTGTCTCATCGACGGTG AATAAAGTTGTTCCGCGTTCTGGACTGGCCAACTTCTACCGTGGATTCGGCCCGACTCTCATGGGAATGCTTCCC TACGCCGGAATATCCTTCCTGACTCACGATACCGTCGGCGACTGGCTGAAATCGCCGATGCTTTCTCCCTACACC ACGATACCTGAACATGAAGAAACTGGACACCCGAAGAAACATCACCGGCAGCAACTGACAGCTGCCGCGGAGCTT TTCTCCGGAGCGATCGCGGGTGTTGTGTCGCAGAGTTCTTCGTATCCGTTCGAAGTGATGCGACGACGCATGCAA GTCGGCGGTGTCGTCGGCGATGGCCACCGACTCGGCATTGTCGAGACTGCCCGTATGATATTCCTCGAACGGGGC TTCCGGGGGTTCTGGGTTGGGCTGACGATCGGATACCTCAAGGTGATCCCGATGACAGCCACCGGGTTTTTCGTT TATGATCGGTTGAAGGGAAGACTTGGCATTTAG |
Transcript | >Ani_SJS100_1|g7143.t1 ATGTCGGCTGTCATCTCGGACCATGCTCAGCCTGACTCTTCTGCTACCGGATCCGACCCCTCACAGTTCCGTCCT GCATCACCATCCTCAAGAAATTCGCAATCACCCTCTCCTCAGATGGAGCAAGTCGCACAGTCGAGACCGGCCCGA GGCTCGACACCAGGCGATACAACTGATCGCTTAGCCGTGGGTACGGCGCAGACGACGGCCGTCGATGATGCCTCC ACCCCGCGTCCATCGCAAAAGAGCCATGGCGCAACGCAAGAAGTCAACAAGCGGAGCGTGGACTACTTACTACGA AGTGGAGTGGCGGGGGGTTTGGCGGGATGTGCGGCCAAAACCGTTGTTGCTCCTCTCGATCGCGTTAAGATTCTG TTTCAAGCGTCCAATCCACAATTCGCTAAATACTCCGGTAGCTGGTTTGGCTTAATATCGGCTGTTCGCGATATC AGACGCCACGAGGGCCCTAGGGGTCTCTTCAAGGGCCACTCAGCGACATTACTCCGCATTTTCCCCTATGCCGCT ATCAAGTTCCTCGCCTACGAGCAAATTCGAGCAGTGGTGATTCCGTCGCGCGACAAAGAAACGCCTCTGCGCCGA CTTGTCTCTGGAAGCATGGCCGGCATGACGTCTGTCTTTTTTACGTATCCGTTAGAGCTTATTCGAGTACGCTTA GCATTTGAGACGAAACGCACGTCTCGCTCTTCATTCCGCGACATCATTCGACAGATTTACAACGAGCGGATCACT ATGCCATCATCGACGGGGGCATCAATATCGGAAGCCCCAGTGACCGCCACTGCAGAGAGTGTCTCATCGACGGTG AATAAAGTTGTTCCGCGTTCTGGACTGGCCAACTTCTACCGTGGATTCGGCCCGACTCTCATGGGAATGCTTCCC TACGCCGGAATATCCTTCCTGACTCACGATACCGTCGGCGACTGGCTGAAATCGCCGATGCTTTCTCCCTACACC ACGATACCTGAACATGAAGAAACTGGACACCCGAAGAAACATCACCGGCAGCAACTGACAGCTGCCGCGGAGCTT TTCTCCGGAGCGATCGCGGGTGTTGTGTCGCAGAGTTCTTCGTATCCGTTCGAAGTGATGCGACGACGCATGCAA GTCGGCGGTGTCGTCGGCGATGGCCACCGACTCGGCATTGTCGAGACTGCCCGTATGATATTCCTCGAACGGGGC TTCCGGGGGTTCTGGGTTGGGCTGACGATCGGATACCTCAAGGTGATCCCGATGACAGCCACCGGGTTTTTCGTT TATGATCGGTTGAAGGGAAGACTTGGCATTTAG |
Gene | >Ani_SJS100_1|g7143.t1 ATGTCGGCTGTCATCTCGGACCATGCTCAGCCTGACTCTTCTGCTACCGGATCCGACCCCTCACAGTTCCGTCCT GCATCACCATCCTCAAGAAATTCGCAATCACCCTCTCCTCAGATGGAGCAAGTCGCACAGTCGAGACCGGCCCGA GGCTCGACACCAGGCGATACAACTGATCGCTTAGCCGTGGGTACGGCGCAGACGACGGCCGTCGATGATGCCTCC ACCCCGCGTCCATCGCAAAAGAGCCATGGCGCAACGCAAGAAGTCAACAAGCGGAGCGTGGACTACTTACTACGA AGTGGAGTGGCGGGGGGTTTGGCGGGATGTGCGGTGAGTTTTGCTTCTGCAGGAACGCAGAGCATCGGAATGCGA ACCGGACGTGGTAGACTAACTTGTGTCACCTAGGCCAAAACCGTTGTTGCTCCTCTCGATCGCGTTAAGATTCTG TTTCAAGCGTCCAATCCACAATTCGCTAAATACTCCGGTAGCTGGTTTGGCTTAATATCGGCTGTTCGCGATATC AGACGCCACGAGGGCCCTAGGGGTCTCTTCAAGGGCCACTCAGCGACATTACTCCGCATTTTCCCCTATGCCGCT ATCAAGTTCCTCGCCTACGAGCAAATTCGAGCAGTGGTGATTCCGTCGCGCGACAAAGAAACGCCTCTGCGCCGA CTTGTCTCTGGAAGCATGGCCGGCATGACGTCTGTCTTTTTTACGTATCCGTTAGAGCTTATTCGAGTACGCTTA GCATTTGAGACGAAACGCACGTCTCGCTCTTCATTCCGCGACATCATTCGACAGATTTACAACGAGCGGATCACT ATGCCATCATCGACGGGGGCATCAATATCGGAAGCCCCAGTGACCGCCACTGCAGAGAGTGTCTCATCGACGGTG AATAAAGTTGTTCCGCGTTCTGGACTGGCCAACTTCTACCGTGGATTCGGCCCGACTCTCATGGGAATGCTTCCC TACGCCGGAATATCCTTCCTGACTCACGATACCGTCGGCGACTGGCTGAAATCGCCGATGCTTTCTCCCTACACC ACGATACCTGAACATGAAGAAACTGGACACCCGAAGAAACATCACCGGCAGCAACTGACAGCTGCCGCGGAGCTT TTCTCCGGAGCGATCGCGGGTGTTGTGTCGCAGAGTTCTTCGTATCCGTTCGAAGTGATGCGACGACGCATGCAA GTCGGCGGTGTCGTCGGCGATGGCCACCGACTCGGCATTGTCGAGACTGCCCGTATGATATTCCTCGAACGGGGC TTCCGGGGGTTCTGGGTTGGGCTGACGATCGGATACCTCAAGGTGATCCCGATGACAGCCACCGGGTTTTTCGTT TATGATCGGTTGAAGGGAAGACTTGGCATTTAG |