Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g7140.t1
Gene name
Locationscaffold_048:171664..173244
Strand-
Gene length (bp)1580
Transcript length (bp)1248
Coding sequence length (bp)1248
Protein length (aa) 416

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03388 Lectin_leg-like Legume-like lectin family 3.9E-28 36 231

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0005575 cellular_component No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 17 0.45

Transmembrane Domains

Domain # Start End Length
1 381 403 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g7140.t1
MKIPVSLLSLVAAATAQSVIESSSFGFGQTLSADGGAISGWQTGGESHTPDILSNKIILTPPYPGNTRGFAWSQT
PVSQSEWTAEFQFRATGPERGGGNLQLWYAKDGKDRIGTSSIYTVNQFDGFALVIDSHGGRGGSVRGFLNDGTTD
YKSHRSVDSLAFGHCDYPYRNLGRPSTVRLKHTKSIFEVTVDDKLCFSTDKVALPTGNVFGLTAATPENPDSFEV
FKFVLQSAESGTGSAVPVQQQNTNQQPIAAQQQAVPQQQQQAPPVNTGFEQQFADLSNRVQVVNQATDNIIRELG
SQDTKAANRQVELLQKLASKEQIASLDARLQRMEQMLQTIQRDLEGKDYHSRFNQLQETLRSSHLSLTENLLGVI
TSSAPRMGFFICMIIAFQGLLAVAYIIYKRRRANMPKKFL*
Coding >Ani_SJS100_1|g7140.t1
ATGAAGATCCCTGTTTCTCTCCTTTCTTTGGTTGCTGCTGCCACAGCTCAATCGGTGATTGAAAGCTCCAGCTTC
GGCTTCGGCCAGACGTTATCAGCAGATGGCGGTGCCATTTCTGGGTGGCAGACTGGAGGGGAATCGCATACCCCC
GACATCCTCTCTAACAAGATCATCCTGACACCCCCTTACCCAGGCAATACAAGGGGATTTGCTTGGTCACAGACT
CCTGTATCGCAGTCGGAATGGACAGCAGAGTTCCAATTTCGAGCGACTGGTCCCGAACGGGGTGGAGGTAACCTC
CAGCTCTGGTATGCCAAGGACGGTAAAGATAGAATCGGCACTTCCAGCATCTATACTGTCAATCAATTCGACGGT
TTTGCTCTGGTCATTGACAGCCACGGCGGAAGGGGTGGAAGTGTGCGCGGGTTCCTCAACGATGGCACAACAGAC
TATAAGAGCCACAGAAGCGTTGATAGCTTGGCTTTTGGACACTGCGACTACCCTTACCGCAATCTTGGACGGCCC
TCTACCGTCCGCCTAAAGCACACCAAGTCCATCTTCGAGGTTACTGTCGATGACAAGCTGTGCTTCTCCACTGAC
AAGGTTGCTCTCCCTACCGGCAATGTCTTCGGTCTGACTGCCGCAACCCCCGAGAACCCCGACTCCTTCGAAGTC
TTCAAGTTCGTTCTCCAATCCGCCGAGTCTGGAACCGGCAGCGCTGTGCCCGTTCAGCAGCAGAACACCAACCAG
CAGCCTATTGCCGCCCAACAACAGGCCGTTCCCCAACAGCAGCAGCAGGCACCCCCGGTCAACACCGGCTTTGAG
CAGCAGTTCGCCGACCTGAGCAACCGCGTCCAGGTCGTCAACCAAGCCACCGACAACATCATCCGCGAACTCGGA
AGCCAAGACACCAAGGCCGCCAACCGCCAGGTCGAGCTCCTCCAGAAACTCGCCAGCAAGGAACAGATCGCCAGC
CTCGACGCCAGACTCCAGAGAATGGAACAGATGCTGCAGACCATTCAGCGTGACCTGGAAGGCAAGGACTACCAC
AGCCGCTTCAACCAACTTCAGGAAACCTTGCGCTCGTCTCACCTTAGCTTGACCGAGAACCTCTTGGGAGTCATC
ACCTCCTCCGCCCCGCGCATGGGATTTTTCATCTGCATGATCATCGCCTTCCAGGGTCTTCTTGCCGTGGCTTAC
ATCATCTACAAGCGTCGCCGTGCGAACATGCCTAAGAAGTTCCTCTAA
Transcript >Ani_SJS100_1|g7140.t1
ATGAAGATCCCTGTTTCTCTCCTTTCTTTGGTTGCTGCTGCCACAGCTCAATCGGTGATTGAAAGCTCCAGCTTC
GGCTTCGGCCAGACGTTATCAGCAGATGGCGGTGCCATTTCTGGGTGGCAGACTGGAGGGGAATCGCATACCCCC
GACATCCTCTCTAACAAGATCATCCTGACACCCCCTTACCCAGGCAATACAAGGGGATTTGCTTGGTCACAGACT
CCTGTATCGCAGTCGGAATGGACAGCAGAGTTCCAATTTCGAGCGACTGGTCCCGAACGGGGTGGAGGTAACCTC
CAGCTCTGGTATGCCAAGGACGGTAAAGATAGAATCGGCACTTCCAGCATCTATACTGTCAATCAATTCGACGGT
TTTGCTCTGGTCATTGACAGCCACGGCGGAAGGGGTGGAAGTGTGCGCGGGTTCCTCAACGATGGCACAACAGAC
TATAAGAGCCACAGAAGCGTTGATAGCTTGGCTTTTGGACACTGCGACTACCCTTACCGCAATCTTGGACGGCCC
TCTACCGTCCGCCTAAAGCACACCAAGTCCATCTTCGAGGTTACTGTCGATGACAAGCTGTGCTTCTCCACTGAC
AAGGTTGCTCTCCCTACCGGCAATGTCTTCGGTCTGACTGCCGCAACCCCCGAGAACCCCGACTCCTTCGAAGTC
TTCAAGTTCGTTCTCCAATCCGCCGAGTCTGGAACCGGCAGCGCTGTGCCCGTTCAGCAGCAGAACACCAACCAG
CAGCCTATTGCCGCCCAACAACAGGCCGTTCCCCAACAGCAGCAGCAGGCACCCCCGGTCAACACCGGCTTTGAG
CAGCAGTTCGCCGACCTGAGCAACCGCGTCCAGGTCGTCAACCAAGCCACCGACAACATCATCCGCGAACTCGGA
AGCCAAGACACCAAGGCCGCCAACCGCCAGGTCGAGCTCCTCCAGAAACTCGCCAGCAAGGAACAGATCGCCAGC
CTCGACGCCAGACTCCAGAGAATGGAACAGATGCTGCAGACCATTCAGCGTGACCTGGAAGGCAAGGACTACCAC
AGCCGCTTCAACCAACTTCAGGAAACCTTGCGCTCGTCTCACCTTAGCTTGACCGAGAACCTCTTGGGAGTCATC
ACCTCCTCCGCCCCGCGCATGGGATTTTTCATCTGCATGATCATCGCCTTCCAGGGTCTTCTTGCCGTGGCTTAC
ATCATCTACAAGCGTCGCCGTGCGAACATGCCTAAGAAGTTCCTCTAA
Gene >Ani_SJS100_1|g7140.t1
ATGAAGATCCCTGTTTCTCTCCTTTCTTTGGTTGCTGCTGCCACAGCTCAATCGGTGATTGAAAGCTCCAGCTTC
GGCTTCGGCCAGACGTATGTATCACCGTCTTTACCCAGTCTGACACAAGTCAATCCCTGATTTACTAATGCCTCC
CAGGTTATCAGCAGATGGCGGTGCCATTTCTGGGTGGCAGACTGGAGGGGAATCGCATACCCCCGACATCGTATG
CTGATCACTCCCATGATGAAGCTCCAAGCCATTGCGTACTGACTGCTGCGTAGCTCTCTAACAAGATCATCCTGA
CACCCCCTTACCCAGGCAATACAAGGGGATTTGCTTGGTCACAGACTCCGTAAGTCTTGCTGGTTCCTATACTTG
ACGGATTGATATTGACCCAATTTTGTAGTGTATCGCAGTCGGAATGGACAGCAGAGTTCCAATTTCGAGCGACTG
GTCCCGAACGGGGTGGAGGTAACCTCCAGCTCTGGTATGCCAAGGACGGTAAAGATAGAATCGGCACTTCCAGCA
TCTATACTGTCAATCAATTCGACGGTTTTGCTCTGGTCATTGACAGCCACGGCGGAAGGGTAAGTCCGAAGCTAC
TGTCTGATGGCAAAAGCTAATATTTACCAGGGTGGAAGTGTGCGCGGGTTCCTCAACGATGGCACAACAGACTAT
AAGAGCCACAGAAGCGTTGATAGCTTGGCTTTTGGACACTGCGACTACCCTTACCGCAATCTTGGACGGCCCTCT
ACCGTCCGCCTAAAGCACACCAAGTCCATCTTCGAGGTTACTGTCGATGACAAGCTGTGCTTCTCCACTGACAAG
GTGCGTCCATCCACGCCACATCCCCATCAACAATCTAACGTAAACAGGTTGCTCTCCCTACCGGCAATGTCTTCG
GTCTGACTGCCGCAACCCCCGAGAACCCCGACTCCTTCGAAGTCTTCAAGTTCGTTCTCCAATCCGCCGAGTCTG
GAACCGGCAGCGCTGTGCCCGTTCAGCAGCAGAACACCAACCAGCAGCCTATTGCCGCCCAACAACAGGCCGTTC
CCCAACAGCAGCAGCAGGCACCCCCGGTCAACACCGGCTTTGAGCAGCAGTTCGCCGACCTGAGCAACCGCGTCC
AGGTCGTCAACCAAGCCACCGACAACATCATCCGCGAACTCGGAAGCCAAGACACCAAGGCCGCCAACCGCCAGG
TCGAGCTCCTCCAGAAACTCGCCAGCAAGGAACAGATCGCCAGCCTCGACGCCAGACTCCAGAGAATGGAACAGA
TGCTGCAGACCATTCAGCGTGACCTGGAAGGCAAGGACTACCACAGCCGCTTCAACCAACTTCAGGAAACCTTGC
GCTCGTCTCACCTTAGCTTGACCGAGAACCTCTTGGGAGGTAAGTACTCCCCTTATGGTTCACAAACCACCCGAA
TCGAAGCTAACTTACTCACTTATCCAGTCATCACCTCCTCCGCCCCGCGCATGGGATTTTTCATCTGCATGATCA
TCGCCTTCCAGGGTCTTCTTGCCGTGGCTTACATCATCTACAAGCGTCGCCGTGCGAACATGCCTAAGAAGTTCC
TCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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