© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g7138.t1 |
| Gene name | |
| Location | scaffold_048:157182..160682 |
| Strand | - |
| Gene length (bp) | 3500 |
| Transcript length (bp) | 2244 |
| Coding sequence length (bp) | 2244 |
| Protein length (aa) | 748 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00732 | GMC_oxred_N | GMC oxidoreductase | 1.7E-56 | 265 | 559 |
| PF05199 | GMC_oxred_C | GMC oxidoreductase | 3.0E-08 | 663 | 745 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | Yes |
| GO:0050660 | flavin adenine dinucleotide binding | Yes |
| GO:0000166 | nucleotide binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0043168 | anion binding | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:0005488 | binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0043167 | ion binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 16 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| 2 | 44 | 66 | 22 |
| 3 | 79 | 101 | 22 |
| 4 | 124 | 146 | 22 |
| 5 | 159 | 181 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g7138.t1 MTLASLFLFYSYAVATYLILTIGHGGYPTSQTQSWRLTFTLKCVYYLRLAYGTGLGLVKCSILMALFRSLAASSK AARYAILVIMALCISWSLMATLLSLLNCRPLSYNWNLQRPESHCINRNAAFMAVSIIDVVTNAAILVLPLPRVIR TKITQPEKLVMASLLVLGLFVVAITAVRTVTIAKTDFSAIYDNGKMIIIWTTVEWTVALMIANSPVLWPLLDWLA PFHSMENGQADERGNHNTAPISPDTLRSTSILVGTPGEQFEYIIVGGGTAGCVLASRLKQYNSSLSILLVEAGPD ASNHPLVPDGSKATQLLGSELDWTYDTVPQKHLHDSVLSNHAGKALGGSTTINSGGWMRGAKEDYDLWASLVGDF RWSYHGLLPYFRKLEHHFDPFADPEVHGFEGPIKTESVSSTGRRYPLRQLVQEVWNSVGVAYNSNINSGSPYGLV EVVENRDHGMRQMSSSVYPLDVEVMTETLVKRVLVEERDDQKVAIGVVLEDTDESQIIARQEVIISAGAYRTPQL MMLSGIGPAEELRAYGIDIVLDLPDVGRHFADHVAVSQWWQLKHPEKGLSIGSPAFTDPAFFRGNPIDFVALDSV PLDGLRQALVKDDPNSNPDEHPLIASQRVHVETFTVYAAGNAQNPTIATDGTHITTGVSCMLPTSRGSIKLADRD VRSAPRIDPNYCATEADRYVLREGLRKLRKALRDTSAGQEMIESETVDENYDPLGPETDDEALDDLIRRRAA* |
| Coding | >Ani_SJS100_1|g7138.t1 ATGACGCTCGCGTCCTTGTTCTTATTCTACTCCTACGCCGTGGCGACCTACTTGATTCTGACAATCGGGCACGGT GGCTACCCAACGTCTCAGACACAGAGCTGGCGGCTTACTTTCACCCTCAAGTGTGTCTACTATCTTCGGTTGGCT TACGGCACAGGACTGGGCTTGGTGAAATGCAGTATCTTGATGGCCCTGTTCAGATCCCTTGCTGCTTCATCCAAG GCCGCTCGATATGCGATCCTGGTCATCATGGCACTCTGCATATCCTGGAGCCTGATGGCCACCCTCTTAAGCCTC TTGAACTGTCGCCCATTGAGCTACAACTGGAACCTGCAACGTCCAGAAAGCCACTGCATCAATCGAAATGCTGCC TTTATGGCAGTGAGCATCATTGACGTTGTGACAAACGCCGCTATTCTGGTTTTGCCGCTCCCTAGGGTTATAAGA ACAAAGATTACCCAACCGGAGAAGCTAGTCATGGCCAGTCTTCTGGTTTTGGGACTATTTGTTGTTGCCATTACC GCGGTCCGTACGGTCACCATCGCCAAAACGGACTTTTCTGCCATTTATGACAATGGCAAGATGATCATCATCTGG ACAACGGTGGAGTGGACAGTGGCGCTCATGATAGCCAATTCTCCTGTCTTGTGGCCTTTGCTTGACTGGCTCGCT CCTTTCCATTCTATGGAGAATGGGCAGGCTGACGAGCGGGGTAATCATAATACAGCCCCGATCTCTCCAGACACT CTGCGATCGACTTCTATACTCGTCGGAACCCCAGGTGAGCAATTTGAATACATTATTGTCGGTGGTGGTACAGCC GGCTGTGTCCTAGCCTCACGGCTGAAGCAATACAACTCCTCTTTGTCGATCTTGCTTGTCGAAGCGGGGCCCGAT GCCAGCAATCACCCCCTCGTACCAGACGGAAGTAAAGCCACTCAGTTACTTGGATCAGAGCTAGATTGGACATAC GATACAGTGCCGCAGAAGCATCTTCATGACAGCGTACTCTCAAACCATGCAGGAAAAGCTCTAGGTGGTAGTACC ACAATTAACAGCGGCGGATGGATGCGAGGTGCAAAAGAAGATTATGACCTCTGGGCCAGCTTGGTCGGTGACTTT CGATGGAGCTACCATGGTCTCCTTCCTTACTTCCGGAAGCTTGAGCATCACTTCGATCCCTTTGCCGACCCTGAA GTTCACGGGTTTGAAGGTCCTATCAAAACCGAGTCCGTATCCTCTACAGGCCGCAGATACCCTCTTCGTCAATTG GTGCAAGAGGTCTGGAATTCCGTCGGTGTAGCATATAACTCCAACATTAATTCCGGCAGTCCTTACGGGCTGGTT GAGGTTGTCGAGAATCGCGACCACGGAATGAGACAAATGTCGAGCTCCGTTTATCCTCTAGACGTGGAGGTCATG ACTGAAACCCTGGTCAAGCGAGTGCTGGTGGAGGAACGCGATGACCAAAAGGTTGCAATAGGTGTAGTGTTGGAG GATACGGACGAAAGCCAGATTATTGCACGTCAAGAGGTGATCATATCTGCAGGTGCATATCGTACCCCTCAGCTC ATGATGCTTTCGGGGATTGGCCCAGCGGAGGAATTGCGAGCCTACGGGATCGATATTGTTCTCGATCTTCCGGAT GTAGGCCGTCACTTTGCGGACCATGTAGCAGTCTCTCAGTGGTGGCAGTTGAAGCACCCGGAGAAGGGGCTATCA ATCGGATCACCCGCCTTCACCGACCCAGCTTTCTTCCGAGGAAATCCCATTGACTTTGTGGCCTTAGATTCAGTG CCCCTCGATGGCCTTCGTCAAGCGTTGGTCAAGGACGACCCCAATTCGAACCCGGATGAGCATCCACTCATTGCC TCCCAGCGTGTGCATGTGGAAACATTCACAGTGTATGCGGCAGGAAATGCTCAGAACCCTACAATTGCTACAGAT GGCACACATATCACGACCGGCGTATCCTGTATGCTTCCTACCTCTCGGGGCAGTATCAAGCTGGCAGATCGAGAC GTCCGAAGCGCGCCTCGTATCGATCCTAATTACTGTGCTACCGAGGCTGATCGATATGTCCTGCGTGAGGGGCTT CGGAAATTGCGAAAAGCCTTGCGCGACACTTCAGCGGGTCAGGAAATGATTGAATCAGAAACTGTCGATGAAAAC TATGATCCTTTAGGTCCTGAAACAGATGATGAAGCTCTTGATGATCTCATCCGCCGTCGAGCTGCGTAA |
| Transcript | >Ani_SJS100_1|g7138.t1 ATGACGCTCGCGTCCTTGTTCTTATTCTACTCCTACGCCGTGGCGACCTACTTGATTCTGACAATCGGGCACGGT GGCTACCCAACGTCTCAGACACAGAGCTGGCGGCTTACTTTCACCCTCAAGTGTGTCTACTATCTTCGGTTGGCT TACGGCACAGGACTGGGCTTGGTGAAATGCAGTATCTTGATGGCCCTGTTCAGATCCCTTGCTGCTTCATCCAAG GCCGCTCGATATGCGATCCTGGTCATCATGGCACTCTGCATATCCTGGAGCCTGATGGCCACCCTCTTAAGCCTC TTGAACTGTCGCCCATTGAGCTACAACTGGAACCTGCAACGTCCAGAAAGCCACTGCATCAATCGAAATGCTGCC TTTATGGCAGTGAGCATCATTGACGTTGTGACAAACGCCGCTATTCTGGTTTTGCCGCTCCCTAGGGTTATAAGA ACAAAGATTACCCAACCGGAGAAGCTAGTCATGGCCAGTCTTCTGGTTTTGGGACTATTTGTTGTTGCCATTACC GCGGTCCGTACGGTCACCATCGCCAAAACGGACTTTTCTGCCATTTATGACAATGGCAAGATGATCATCATCTGG ACAACGGTGGAGTGGACAGTGGCGCTCATGATAGCCAATTCTCCTGTCTTGTGGCCTTTGCTTGACTGGCTCGCT CCTTTCCATTCTATGGAGAATGGGCAGGCTGACGAGCGGGGTAATCATAATACAGCCCCGATCTCTCCAGACACT CTGCGATCGACTTCTATACTCGTCGGAACCCCAGGTGAGCAATTTGAATACATTATTGTCGGTGGTGGTACAGCC GGCTGTGTCCTAGCCTCACGGCTGAAGCAATACAACTCCTCTTTGTCGATCTTGCTTGTCGAAGCGGGGCCCGAT GCCAGCAATCACCCCCTCGTACCAGACGGAAGTAAAGCCACTCAGTTACTTGGATCAGAGCTAGATTGGACATAC GATACAGTGCCGCAGAAGCATCTTCATGACAGCGTACTCTCAAACCATGCAGGAAAAGCTCTAGGTGGTAGTACC ACAATTAACAGCGGCGGATGGATGCGAGGTGCAAAAGAAGATTATGACCTCTGGGCCAGCTTGGTCGGTGACTTT CGATGGAGCTACCATGGTCTCCTTCCTTACTTCCGGAAGCTTGAGCATCACTTCGATCCCTTTGCCGACCCTGAA GTTCACGGGTTTGAAGGTCCTATCAAAACCGAGTCCGTATCCTCTACAGGCCGCAGATACCCTCTTCGTCAATTG GTGCAAGAGGTCTGGAATTCCGTCGGTGTAGCATATAACTCCAACATTAATTCCGGCAGTCCTTACGGGCTGGTT GAGGTTGTCGAGAATCGCGACCACGGAATGAGACAAATGTCGAGCTCCGTTTATCCTCTAGACGTGGAGGTCATG ACTGAAACCCTGGTCAAGCGAGTGCTGGTGGAGGAACGCGATGACCAAAAGGTTGCAATAGGTGTAGTGTTGGAG GATACGGACGAAAGCCAGATTATTGCACGTCAAGAGGTGATCATATCTGCAGGTGCATATCGTACCCCTCAGCTC ATGATGCTTTCGGGGATTGGCCCAGCGGAGGAATTGCGAGCCTACGGGATCGATATTGTTCTCGATCTTCCGGAT GTAGGCCGTCACTTTGCGGACCATGTAGCAGTCTCTCAGTGGTGGCAGTTGAAGCACCCGGAGAAGGGGCTATCA ATCGGATCACCCGCCTTCACCGACCCAGCTTTCTTCCGAGGAAATCCCATTGACTTTGTGGCCTTAGATTCAGTG CCCCTCGATGGCCTTCGTCAAGCGTTGGTCAAGGACGACCCCAATTCGAACCCGGATGAGCATCCACTCATTGCC TCCCAGCGTGTGCATGTGGAAACATTCACAGTGTATGCGGCAGGAAATGCTCAGAACCCTACAATTGCTACAGAT GGCACACATATCACGACCGGCGTATCCTGTATGCTTCCTACCTCTCGGGGCAGTATCAAGCTGGCAGATCGAGAC GTCCGAAGCGCGCCTCGTATCGATCCTAATTACTGTGCTACCGAGGCTGATCGATATGTCCTGCGTGAGGGGCTT CGGAAATTGCGAAAAGCCTTGCGCGACACTTCAGCGGGTCAGGAAATGATTGAATCAGAAACTGTCGATGAAAAC TATGATCCTTTAGGTCCTGAAACAGATGATGAAGCTCTTGATGATCTCATCCGCCGTCGAGCTGCGTAA |
| Gene | >Ani_SJS100_1|g7138.t1 ATGACGCTCGCGTCCTTGGTAAGTGCTGTTGACACGCCTCTCAGTAATAATCTAAGAGGCCCCTTGATGGTTCTT CTAGCATCTGACGGACATGATGCAGTTCTTATTCTACTCCTACGCCGTGGCGACCTACTTGAGTATGTCTATGCT ACTAGACCGTCCTAGTATACGACTTGTTGGATCTTAACTGATGTCGCATTCGTCTACTAGTTCTGACAATCGGGC ACGGTGGCTACCCAACGTCTCAGACACAGAGCTGGCGGCTTACTTTCACCCTCAAGGTGCGTATGCGCCCAATAG GTTGCCAGCACTTCAATGCTAATGGCTGCATACAGTGTGTCTACTATCTTCGGTTGGCTTACGGCACAGGACTGG GCTTGGTGAAATGCAGTATCTTGATGGCCCTGTTCAGATCCCTTGCTGCTTCATCCAAGGCCGCTCGATATGCGA TCCTGGTCATCATGGCACTCTGCATATCCTGGAGCCTGATGGCCACCCTCTTAAGCCTCTTGAACTGTCGCCCAT TGAGCTACAACTGGAACCTGCAACGTCCAGAAAGCCACTGCATCAATCGAAATGCTGCCTTTATGGCAGTGAGCA TCATTGACGTTGTGACAAACGCCGCTATTCTGGTTTTGCCGCTCCCTAGGGTTATAAGAACAAAGATTACCCAAC CGGAGAAGCTAGTCATGGCCAGTCTTCTGGTTTTGGGACTATTGTAAGTGGTCCGGGGTCTATCCCTGGTAAACA AAGCAGATATTAACATGCTTCTAAACAGTGTTGTTGCCATTACCGCGGTCCGTACGGTCACCATCGCCAAAACGG ACTTTTCTGCCATTTATGACAATGGCAAGATGATCATCATCTGGACAACGGTGGAGTGGACAGTGGCGCTCATGA TAGCCAATTCTCCTGTCTTGTGGCCTTTGCTTGACTGGCTCGCTCCTTTCCATTCTATGGAGAATGGTCCGTACG AACGATCGGCATATAACCCTTCGTGTCACTTGCTAAAGCGTCTGCGACCAACAAATTTGCTGGAATGCACTCAAA CATTGACATCAAAGACGGCCGTCGCGGAGACAGGCTCAGTACACTCATCTCGATCTATTATCCGAGGGTTCGGGG CCAACTGGACAGAGGCAATCGGGCAAGCACAACAACCAGATCCCTTTCTATCGTTGGAGCCGGGCGAAGTGCGAG TGCAGACTGAGTGGTCGGTTGAACGGTCGTCAGTGGGTAGATTGGATCGATTAAGGCCGGGAAGAAGATCGTAGC CGAAATGATAATTAAAAGTTGTAGCACCCTCACTTACTGAGACGAACTTTTTTAGTCTCACCTCCCATACGACAT TCTGTACTGCCAAATGTGTTTCCGCTTGGGCTGAAACAAGAGTGACATTCCTTTCATCACACACGTTCCGTACCT CAACCAATCATTCACCAACAGGCTAAAATCTGACTTACATGCTACTTCCCGTGCTGAGATTGGGGGGGTCTTTTT TCCTTTCGCAGCCTTGCCATGCACTGCCTCGTGTTCTGCCTTCCTTGGGCACGTTTTGGCCCTACAATGTACAGG GTAAATACGGGGGGTATTTGGTAGGGGTGCACTCGGCCGTGCTCATCTCCTCACCGATTATTCAACTGGATCGGA ATGGAGCTGGGGGGCCTTAATTGACGTCACTAAAGGCCTTTTGAGACTCTACTAAGCTGGAGTCATTTCTGATTC TATTAACGCCTATCTCGCTCGGAGCTTTTAACAGATTGACTCAGGGCAGGCTGACGAGCGGGGTAATCATAATAC AGCCCCGATCTCTCCAGACACTCTGCGATCGACTTCTATACTCGTCGGAACCCCAGGTATAGTATTCTTTTTATA CCCCACCGTGCTAAGACCCCCTAAGGTAAATCACCCCTTGTGGATACCAATATGGCTGCAGGTGAGCAATTTGAA TACATTATTGTCGGTGGTGGTACAGCCGGCTGTGTCCTAGCCTCACGGCTGAAGCAATACAACTCCTCTTTGTCG ATCTTGCTTGTCGAAGCGGGGCCCGATGCCAGCAATCACCCCCTCGTACCAGACGGAAGTAAAGCCACTCAGTTA CTTGGATCAGAGCTAGATTGGACATACGATACAGTGCCGCAGAAGCATCTTCATGACAGCGTACTCTCAAACCAT GCAGGAAAAGCTCTAGGTGGTAGTACCACAATTAACAGCGGTGAGCCTTAGTATTCATTCATCGAGGGTCTGAAC TTCAAGGAGGTGATGATGGACTTGGGGTGATATCGTACAGAGCTAATGGACCCTATACGGCGCGATTAGGCGGAT GGATGCGAGGTGCAAAAGAAGATTATGACCTCTGGGCCAGCTTGGTCGGTGACTTTCGATGGAGCTACCATGGTC TCCTTCCTTACTTCCGGAAGCTTGAGCATCACTTCGATCCCTTTGCCGACCCTGAAGTTCACGGGTTTGAAGGTC CTATCAAAACCGAGTCCGTATCCTCTACAGGCCGCAGATACCCTCTTCGTCAATTGGTGCAAGAGGTCTGGAATT CCGTCGGTGTAGCATATAACTCCAACATTAATTCCGGCAGTCCTTACGGGCTGGTTGAGGTTGTCGAGAATCGCG ACCACGGAATGAGACAAATGTCGAGCTCCGTTTATCCTCTAGACGTGGAGGTCATGACTGAAACCCTGGTCAAGC GAGTGCTGGTGGAGGAACGCGATGACCAAAAGGTTGCAATAGGTGTAGTGTTGGAGGATACGGACGAAAGCCAGA TTATTGCACGTCAAGAGGTGATCATATCTGCAGGTGCATATCGTACCCCTCAGCTCATGATGCTTTCGGGGATTG GCCCAGCGGAGGAATTGCGAGCCTACGGGATCGATATTGTTCTCGATCTTCCGGATGTAGGCCGTCACTTTGCGG ACCATGTAGCAGTCTCTCAGTGGTGGCAGTTGAAGCACCCGGAGAAGGGGCTATCAATCGGATCACCCGCCTTCA CCGACCCAGCTTTCTTCCGAGGAAATCCCATTGACTTTGTGGCCTTAGATTCAGTGCCCCTCGATGGCCTTCGTC AAGCGTTGGTCAAGGACGACCCCAATTCGAACCCGGATGAGCATCCACTCATTGCCTCCCAGCGTGTGCATGTGG AAACATTCACAGTGTATGCGGCAGGAAATGCTCAGAACCCTACAATTGCTACAGATGGCACACATATCACGACCG GCGTATCCTGTATGCTTCCTACCTCTCGGGGCAGTATCAAGCTGGCAGATCGAGACGTCCGAAGCGCGCCTCGTA TCGATCCTAATTACTGTGCTACCGAGGCTGATCGATATGTCCTGCGTGAGGGGCTTCGGAAATTGCGAAAAGCCT TGCGCGACACTTCAGCGGGTCAGGAAATGATTGAATCAGAAACTGTCGATGAAAACTATGATCCTTTAGGTCCTG AAACAGATGATGAAGCTCTTGATGATCTCATCCGCCGTCGAGCTGCGTAA |