Protein ID | Ani_SJS100_1|g7133.t1 |
Gene name | |
Location | scaffold_048:137145..139145 |
Strand | + |
Gene length (bp) | 2000 |
Transcript length (bp) | 1878 |
Coding sequence length (bp) | 1878 |
Protein length (aa) | 626 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00628 | PHD | PHD-finger | 1.0E-09 | 136 | 180 |
PF13639 | zf-RING_2 | Ring finger domain | 4.1E-09 | 55 | 86 |
PF13831 | PHD_2 | PHD-finger | 1.0E-06 | 146 | 179 |
PF00097 | zf-C3HC4 | Zinc finger, C3HC4 type (RING finger) | 9.4E-06 | 58 | 85 |
GO Term | Description | Terminal node |
---|---|---|
GO:0046872 | metal ion binding | Yes |
GO:0043169 | cation binding | No |
GO:0005488 | binding | No |
GO:0043167 | ion binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 18 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g7133.t1 MSDTCIVCLGDLGESASDPLAVAAEAAPRLDLGAEGKSADTSLNLDGVDGTEDSGQIAQLLPCGHILHNNCLKPW VERANSCPICRRSFNMVELSDRPGGPVTSSYAVQDRVQQAEVDPSMIIEYIDDDFADFQPCPICGDADNEELLLL CDGCDVPSHTYCVGLDSVPTGPWYCARCVTQRRLGRSSETADWSSQAPDRRGRRTRAQRRRLQNRNQLNSLHWAR VWQSVWDHLNLDLDFPFDDDMAAERARQEQRREEAHQRDFRAWQRRFEVAEQQGGGNRFRDTAALLDIEAPRPSR PRVPREPTPEPESLEEMRAWNAFERAREIENDPSAARKRKEPTLSPSPEPTEPERKLKRPRTRRAEDLAARAMQN GESSRAASAQASARINAESSSEPSFLQSLLKEVEESSNPNGFTSHGASGQSSIAPTDHTTPGPSSPSISPAPSNH SSPRLSSVTPPPTLRSRPMSPLQLGSPADPSSPPFSPDVSPAGSARSAQDDHTSQVPTRRPNRRIPRSATRSAAI RSDDSSPSRPGLSLKVKSDIQKLVGSSLKPYYRSKTITKEQYTEINRNISRKLYERAGDVETLGIGAKATLATVA KDEVEKAIDALKQLNDLNDSVDDSS* |
Coding | >Ani_SJS100_1|g7133.t1 ATGTCCGACACCTGTATTGTGTGCTTAGGAGACCTTGGCGAAAGCGCCAGCGATCCTCTTGCCGTCGCCGCCGAG GCCGCGCCAAGACTTGACCTCGGGGCAGAGGGCAAGTCGGCGGATACCTCTCTCAATCTCGATGGTGTAGATGGC ACGGAGGATTCGGGTCAGATCGCTCAGCTCCTCCCTTGCGGGCATATCCTGCACAATAACTGTCTGAAGCCCTGG GTCGAGCGAGCCAACAGCTGTCCGATATGTCGTCGGAGTTTCAACATGGTCGAACTAAGTGACCGCCCTGGTGGC CCCGTCACATCTTCCTATGCCGTGCAGGATCGAGTCCAGCAAGCAGAAGTCGACCCCTCGATGATAATCGAATAT ATAGACGATGACTTCGCCGATTTCCAACCTTGTCCTATCTGTGGGGATGCAGACAATGAAGAGCTGCTTCTCCTT TGTGATGGCTGCGATGTACCCTCTCACACATATTGCGTTGGCCTCGATTCTGTCCCCACGGGTCCTTGGTACTGC GCACGGTGTGTGACGCAACGTCGTCTCGGGCGGTCTTCTGAGACTGCCGACTGGTCTTCCCAGGCACCAGACAGG CGTGGTCGTCGCACAAGAGCACAGCGACGCAGACTGCAGAACAGAAACCAGCTCAACTCCCTACACTGGGCCCGC GTGTGGCAATCTGTCTGGGATCACCTCAACCTCGACTTGGACTTTCCGTTCGATGATGACATGGCTGCGGAGCGC GCTCGACAAGAGCAACGCCGGGAAGAAGCCCATCAGCGTGATTTCCGAGCCTGGCAACGTCGCTTTGAAGTTGCC GAACAACAGGGTGGTGGCAATCGGTTCCGAGACACTGCCGCTCTATTGGATATCGAGGCGCCTCGCCCTTCGCGG CCTCGCGTTCCGCGTGAGCCCACCCCGGAGCCCGAGTCTCTTGAAGAGATGAGGGCCTGGAATGCTTTCGAGCGT GCCCGCGAAATTGAGAATGACCCAAGCGCGGCCCGGAAACGTAAAGAACCTACATTGTCGCCCTCTCCCGAGCCT ACCGAACCTGAACGCAAGCTGAAGCGGCCCCGGACACGGAGGGCTGAAGACCTGGCAGCTCGGGCTATGCAGAAT GGCGAGTCATCAAGAGCTGCTAGTGCGCAAGCCTCTGCTCGGATCAATGCTGAGAGTTCGAGCGAACCGAGCTTC CTTCAGTCCCTTCTCAAGGAGGTGGAAGAATCGTCCAACCCCAACGGGTTCACTTCTCATGGCGCTTCCGGTCAA TCATCCATTGCACCCACCGATCATACGACCCCAGGCCCCTCCTCGCCTTCCATCTCACCTGCCCCGTCAAACCAT TCTTCCCCGCGTCTATCTTCCGTCACACCGCCTCCAACCCTCCGAAGCAGGCCCATGTCTCCACTACAACTGGGG TCACCAGCAGATCCGTCCTCTCCACCCTTCTCGCCAGATGTGTCGCCGGCTGGTTCCGCTCGCAGTGCCCAAGAT GATCACACATCACAAGTCCCCACTCGCCGCCCGAATCGTCGGATACCTCGCTCTGCCACTCGATCAGCAGCTATC CGATCCGACGATAGCTCGCCCAGTCGTCCCGGCTTGTCCCTTAAAGTCAAGTCTGACATACAAAAGTTGGTCGGG TCATCGCTGAAGCCTTACTATCGTTCGAAGACCATCACGAAAGAACAATACACAGAAATCAATCGCAATATATCT AGGAAGCTGTACGAGCGTGCGGGCGACGTCGAAACGCTCGGGATCGGGGCCAAAGCCACGCTGGCTACTGTGGCC AAGGACGAAGTGGAGAAGGCCATTGATGCGTTGAAGCAACTAAATGACCTCAATGACTCTGTTGATGATAGTTCT TGA |
Transcript | >Ani_SJS100_1|g7133.t1 ATGTCCGACACCTGTATTGTGTGCTTAGGAGACCTTGGCGAAAGCGCCAGCGATCCTCTTGCCGTCGCCGCCGAG GCCGCGCCAAGACTTGACCTCGGGGCAGAGGGCAAGTCGGCGGATACCTCTCTCAATCTCGATGGTGTAGATGGC ACGGAGGATTCGGGTCAGATCGCTCAGCTCCTCCCTTGCGGGCATATCCTGCACAATAACTGTCTGAAGCCCTGG GTCGAGCGAGCCAACAGCTGTCCGATATGTCGTCGGAGTTTCAACATGGTCGAACTAAGTGACCGCCCTGGTGGC CCCGTCACATCTTCCTATGCCGTGCAGGATCGAGTCCAGCAAGCAGAAGTCGACCCCTCGATGATAATCGAATAT ATAGACGATGACTTCGCCGATTTCCAACCTTGTCCTATCTGTGGGGATGCAGACAATGAAGAGCTGCTTCTCCTT TGTGATGGCTGCGATGTACCCTCTCACACATATTGCGTTGGCCTCGATTCTGTCCCCACGGGTCCTTGGTACTGC GCACGGTGTGTGACGCAACGTCGTCTCGGGCGGTCTTCTGAGACTGCCGACTGGTCTTCCCAGGCACCAGACAGG CGTGGTCGTCGCACAAGAGCACAGCGACGCAGACTGCAGAACAGAAACCAGCTCAACTCCCTACACTGGGCCCGC GTGTGGCAATCTGTCTGGGATCACCTCAACCTCGACTTGGACTTTCCGTTCGATGATGACATGGCTGCGGAGCGC GCTCGACAAGAGCAACGCCGGGAAGAAGCCCATCAGCGTGATTTCCGAGCCTGGCAACGTCGCTTTGAAGTTGCC GAACAACAGGGTGGTGGCAATCGGTTCCGAGACACTGCCGCTCTATTGGATATCGAGGCGCCTCGCCCTTCGCGG CCTCGCGTTCCGCGTGAGCCCACCCCGGAGCCCGAGTCTCTTGAAGAGATGAGGGCCTGGAATGCTTTCGAGCGT GCCCGCGAAATTGAGAATGACCCAAGCGCGGCCCGGAAACGTAAAGAACCTACATTGTCGCCCTCTCCCGAGCCT ACCGAACCTGAACGCAAGCTGAAGCGGCCCCGGACACGGAGGGCTGAAGACCTGGCAGCTCGGGCTATGCAGAAT GGCGAGTCATCAAGAGCTGCTAGTGCGCAAGCCTCTGCTCGGATCAATGCTGAGAGTTCGAGCGAACCGAGCTTC CTTCAGTCCCTTCTCAAGGAGGTGGAAGAATCGTCCAACCCCAACGGGTTCACTTCTCATGGCGCTTCCGGTCAA TCATCCATTGCACCCACCGATCATACGACCCCAGGCCCCTCCTCGCCTTCCATCTCACCTGCCCCGTCAAACCAT TCTTCCCCGCGTCTATCTTCCGTCACACCGCCTCCAACCCTCCGAAGCAGGCCCATGTCTCCACTACAACTGGGG TCACCAGCAGATCCGTCCTCTCCACCCTTCTCGCCAGATGTGTCGCCGGCTGGTTCCGCTCGCAGTGCCCAAGAT GATCACACATCACAAGTCCCCACTCGCCGCCCGAATCGTCGGATACCTCGCTCTGCCACTCGATCAGCAGCTATC CGATCCGACGATAGCTCGCCCAGTCGTCCCGGCTTGTCCCTTAAAGTCAAGTCTGACATACAAAAGTTGGTCGGG TCATCGCTGAAGCCTTACTATCGTTCGAAGACCATCACGAAAGAACAATACACAGAAATCAATCGCAATATATCT AGGAAGCTGTACGAGCGTGCGGGCGACGTCGAAACGCTCGGGATCGGGGCCAAAGCCACGCTGGCTACTGTGGCC AAGGACGAAGTGGAGAAGGCCATTGATGCGTTGAAGCAACTAAATGACCTCAATGACTCTGTTGATGATAGTTCT TGA |
Gene | >Ani_SJS100_1|g7133.t1 ATGTCCGACACCTGTATTGTGTGCTTAGGAGACCTTGGCGAAAGCGCCAGCGATCCTCTTGCCGTCGCCGCCGAG GCCGCGCCAAGACTTGACCTCGGGGCAGAGGGCAAGTCGGCGGATACCTCTCTCAATCTCGATGGTGTAGATGGC ACGGAGGATTCGGGTCAGATCGCTCAGCTCCTCCCTTGCGGGCATATCCTGCACAATAACTGTCTGAAGCCCTGG GTCGAGCGAGCCAACAGCTGTCCGATATGTCGTCGGAGTTTCAACATGGTCGAACTAAGTGACCGCCCTGGTGGT AAGTACTTGATAATTCCCCTTTCTATCTATTGATCTACCTACATTGATCATGGATGGTCTCTACTTCCCTCTGTG TCTGTTATATATCTCTCGATGTACTGATCACTGGTTTTCCTTCAGGCCCCGTCACATCTTCCTATGCCGTGCAGG ATCGAGTCCAGCAAGCAGAAGTCGACCCCTCGATGATAATCGAATATATAGACGATGACTTCGCCGATTTCCAAC CTTGTCCTATCTGTGGGGATGCAGACAATGAAGAGCTGCTTCTCCTTTGTGATGGCTGCGATGTACCCTCTCACA CATATTGCGTTGGCCTCGATTCTGTCCCCACGGGTCCTTGGTACTGCGCACGGTGTGTGACGCAACGTCGTCTCG GGCGGTCTTCTGAGACTGCCGACTGGTCTTCCCAGGCACCAGACAGGCGTGGTCGTCGCACAAGAGCACAGCGAC GCAGACTGCAGAACAGAAACCAGCTCAACTCCCTACACTGGGCCCGCGTGTGGCAATCTGTCTGGGATCACCTCA ACCTCGACTTGGACTTTCCGTTCGATGATGACATGGCTGCGGAGCGCGCTCGACAAGAGCAACGCCGGGAAGAAG CCCATCAGCGTGATTTCCGAGCCTGGCAACGTCGCTTTGAAGTTGCCGAACAACAGGGTGGTGGCAATCGGTTCC GAGACACTGCCGCTCTATTGGATATCGAGGCGCCTCGCCCTTCGCGGCCTCGCGTTCCGCGTGAGCCCACCCCGG AGCCCGAGTCTCTTGAAGAGATGAGGGCCTGGAATGCTTTCGAGCGTGCCCGCGAAATTGAGAATGACCCAAGCG CGGCCCGGAAACGTAAAGAACCTACATTGTCGCCCTCTCCCGAGCCTACCGAACCTGAACGCAAGCTGAAGCGGC CCCGGACACGGAGGGCTGAAGACCTGGCAGCTCGGGCTATGCAGAATGGCGAGTCATCAAGAGCTGCTAGTGCGC AAGCCTCTGCTCGGATCAATGCTGAGAGTTCGAGCGAACCGAGCTTCCTTCAGTCCCTTCTCAAGGAGGTGGAAG AATCGTCCAACCCCAACGGGTTCACTTCTCATGGCGCTTCCGGTCAATCATCCATTGCACCCACCGATCATACGA CCCCAGGCCCCTCCTCGCCTTCCATCTCACCTGCCCCGTCAAACCATTCTTCCCCGCGTCTATCTTCCGTCACAC CGCCTCCAACCCTCCGAAGCAGGCCCATGTCTCCACTACAACTGGGGTCACCAGCAGATCCGTCCTCTCCACCCT TCTCGCCAGATGTGTCGCCGGCTGGTTCCGCTCGCAGTGCCCAAGATGATCACACATCACAAGTCCCCACTCGCC GCCCGAATCGTCGGATACCTCGCTCTGCCACTCGATCAGCAGCTATCCGATCCGACGATAGCTCGCCCAGTCGTC CCGGCTTGTCCCTTAAAGTCAAGTCTGACATACAAAAGTTGGTCGGGTCATCGCTGAAGCCTTACTATCGTTCGA AGACCATCACGAAAGAACAATACACAGAAATCAATCGCAATATATCTAGGAAGCTGTACGAGCGTGCGGGCGACG TCGAAACGCTCGGGATCGGGGCCAAAGCCACGCTGGCTACTGTGGCCAAGGACGAAGTGGAGAAGGCCATTGATG CGTTGAAGCAACTAAATGACCTCAATGACTCTGTTGATGATAGTTCTTGA |