© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g7126.t1 |
| Gene name | |
| Location | scaffold_048:120955..122333 |
| Strand | - |
| Gene length (bp) | 1378 |
| Transcript length (bp) | 1314 |
| Coding sequence length (bp) | 1314 |
| Protein length (aa) | 438 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13593 | SBF_like | SBF-like CPA transporter family (DUF4137) | 2.9E-91 | 28 | 379 |
| PF01758 | SBF | Sodium Bile acid symporter family | 2.3E-11 | 97 | 254 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0005575 | cellular_component | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 42 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 21 | 43 | 22 |
| 2 | 58 | 77 | 19 |
| 3 | 90 | 112 | 22 |
| 4 | 127 | 145 | 18 |
| 5 | 157 | 179 | 22 |
| 6 | 203 | 225 | 22 |
| 7 | 238 | 260 | 22 |
| 8 | 270 | 292 | 22 |
| 9 | 324 | 346 | 22 |
| 10 | 356 | 378 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g7126.t1 MSIPNHDPTSTRGITQTFKTIALFILHQWLLIGIGVACVLAYYFPNVAKSGGIIRSEYSILYGAMALIFLISGLS VPREKLIIHLLNWRLHVLVQGLSFLVIPAFILAIVHIILAGDPDEHIDRALLAGYIFLACIPTTIASNVVMTRSA GGDDAAALVEVIIANFLGPFITAGWTVTLLPKSSEFDVWRSGDGDLSDMYRDVFKQLGLAVLLPLVVGQLIRWVW PDIVGKVLAKYRIAKISTACLILLVWSTFSSCFATGALQTLSASSIVFVVLFNIALYMFLTAVCFYCSRPPRIIS GVSFTVKGKTFYPFQQMNPQETIAVCFCGPAKSTALGIPLLYAMWGPLSLYIKSKTSVPVLLYTTEQICVAHFFV HMFKWWHRRVERKSASVSDVECDGEGNANENEEKLDGSGSDGRNLDNQSKGADVSLSQEHNN* |
| Coding | >Ani_SJS100_1|g7126.t1 ATGTCTATACCCAACCATGACCCCACATCCACCAGGGGCATAACACAAACCTTCAAAACCATCGCCCTCTTCATC CTCCACCAATGGCTCCTCATCGGCATCGGAGTCGCCTGCGTCTTGGCCTACTATTTCCCCAACGTCGCCAAGAGC GGCGGCATCATCCGCTCCGAATATAGCATTCTCTACGGCGCAATGGCCCTCATTTTCTTGATCTCGGGTCTCAGC GTGCCTCGAGAAAAGCTCATTATTCACCTCCTCAACTGGCGACTGCATGTTCTTGTCCAGGGTCTATCGTTCCTC GTCATACCGGCCTTTATCCTCGCTATCGTGCATATCATCTTAGCCGGTGATCCAGACGAACATATTGATCGCGCC TTGCTGGCCGGGTATATCTTCCTGGCCTGTATTCCTACCACTATCGCTTCGAATGTCGTCATGACTCGCTCGGCG GGCGGTGACGATGCCGCCGCGCTGGTGGAAGTCATTATTGCGAATTTCCTGGGCCCGTTCATCACCGCTGGGTGG ACGGTTACTTTGCTTCCAAAGTCGTCGGAGTTTGATGTCTGGAGGTCGGGGGATGGGGATCTCTCTGATATGTAC CGCGATGTGTTTAAGCAGTTGGGTCTGGCGGTCTTGTTGCCGTTGGTGGTGGGTCAGTTGATACGCTGGGTTTGG CCGGACATCGTGGGCAAAGTGTTGGCTAAGTATCGCATTGCGAAGATAAGCACCGCGTGCTTGATTCTGTTGGTT TGGTCAACCTTCTCTTCTTGCTTCGCGACAGGAGCGCTCCAGACTCTTTCCGCTTCTAGTATTGTCTTCGTGGTT CTGTTCAATATTGCGCTGTATATGTTCCTTACGGCTGTTTGCTTCTATTGTTCTCGCCCGCCGAGGATCATCTCT GGTGTGTCGTTTACGGTGAAAGGGAAGACATTTTATCCCTTCCAGCAGATGAATCCTCAGGAGACTATTGCCGTC TGTTTCTGTGGTCCGGCGAAGAGTACTGCACTGGGCATTCCGCTGCTTTATGCCATGTGGGGTCCGTTGAGTCTG TATATCAAGTCGAAGACGTCGGTGCCTGTGCTGCTGTATACCACGGAGCAGATTTGTGTGGCGCATTTCTTTGTG CATATGTTCAAGTGGTGGCATCGGCGGGTTGAGAGGAAGAGTGCCAGCGTAAGTGATGTGGAGTGTGATGGAGAG GGAAATGCAAATGAAAATGAGGAGAAGTTGGACGGTTCAGGGTCTGATGGGAGGAATCTGGATAATCAGAGCAAA GGGGCAGATGTGAGTCTGTCCCAGGAGCATAATAATTAA |
| Transcript | >Ani_SJS100_1|g7126.t1 ATGTCTATACCCAACCATGACCCCACATCCACCAGGGGCATAACACAAACCTTCAAAACCATCGCCCTCTTCATC CTCCACCAATGGCTCCTCATCGGCATCGGAGTCGCCTGCGTCTTGGCCTACTATTTCCCCAACGTCGCCAAGAGC GGCGGCATCATCCGCTCCGAATATAGCATTCTCTACGGCGCAATGGCCCTCATTTTCTTGATCTCGGGTCTCAGC GTGCCTCGAGAAAAGCTCATTATTCACCTCCTCAACTGGCGACTGCATGTTCTTGTCCAGGGTCTATCGTTCCTC GTCATACCGGCCTTTATCCTCGCTATCGTGCATATCATCTTAGCCGGTGATCCAGACGAACATATTGATCGCGCC TTGCTGGCCGGGTATATCTTCCTGGCCTGTATTCCTACCACTATCGCTTCGAATGTCGTCATGACTCGCTCGGCG GGCGGTGACGATGCCGCCGCGCTGGTGGAAGTCATTATTGCGAATTTCCTGGGCCCGTTCATCACCGCTGGGTGG ACGGTTACTTTGCTTCCAAAGTCGTCGGAGTTTGATGTCTGGAGGTCGGGGGATGGGGATCTCTCTGATATGTAC CGCGATGTGTTTAAGCAGTTGGGTCTGGCGGTCTTGTTGCCGTTGGTGGTGGGTCAGTTGATACGCTGGGTTTGG CCGGACATCGTGGGCAAAGTGTTGGCTAAGTATCGCATTGCGAAGATAAGCACCGCGTGCTTGATTCTGTTGGTT TGGTCAACCTTCTCTTCTTGCTTCGCGACAGGAGCGCTCCAGACTCTTTCCGCTTCTAGTATTGTCTTCGTGGTT CTGTTCAATATTGCGCTGTATATGTTCCTTACGGCTGTTTGCTTCTATTGTTCTCGCCCGCCGAGGATCATCTCT GGTGTGTCGTTTACGGTGAAAGGGAAGACATTTTATCCCTTCCAGCAGATGAATCCTCAGGAGACTATTGCCGTC TGTTTCTGTGGTCCGGCGAAGAGTACTGCACTGGGCATTCCGCTGCTTTATGCCATGTGGGGTCCGTTGAGTCTG TATATCAAGTCGAAGACGTCGGTGCCTGTGCTGCTGTATACCACGGAGCAGATTTGTGTGGCGCATTTCTTTGTG CATATGTTCAAGTGGTGGCATCGGCGGGTTGAGAGGAAGAGTGCCAGCGTAAGTGATGTGGAGTGTGATGGAGAG GGAAATGCAAATGAAAATGAGGAGAAGTTGGACGGTTCAGGGTCTGATGGGAGGAATCTGGATAATCAGAGCAAA GGGGCAGATGTGAGTCTGTCCCAGGAGCATAATAATTAA |
| Gene | >Ani_SJS100_1|g7126.t1 ATGTCTATACCCAACCATGACCCCACATCCACCAGGGGCATAACACAAACCTTCAAAACCATCGCCCTCTTCATC CTCCACCAATGGCTCCTCATCGGCATCGGAGTCGCCTGCGTCTTGGCCTACTATTTCCCCAACGTCGCCAAGAGC GGCGGCATCATCCGCTCCGAATATAGCATTCTCTACGGCGCAATGGCCCTCATTTTCTTGATCTCGGGTCTCAGC GTGCCTCGAGAAAAGCTCATTATTCACCTCCTCAACTGGCGACTGCATGTTCTTGTCCAGGGTCTATCGTTCCTC GTCATACCGGCCTTTATCCTCGCTATCGTGCATATCATCTTAGCCGGTGATCCAGACGAACATATTGATCGCGCC TTGCTGGCCGGGTATATCTTCCTGGCCTGTATTCCTACCACTATCGCTTCGAATGTCGTCATGACTCGCTCGGCG GGCGGTGACGATGCCGCCGCGCTGGTGGAAGTCATTATTGCGAATTTCCTGGGCCCGTTCATCACCGCTGGGTGG ACGGTTACTTTGCTTCCAAAGTCGTCGGAGTTTGATGTCTGGAGGTCGGGGGATGGGGATCTCTCTGATATGTAC CGCGATGTGTTTAAGCAGTTGGGTCTGGCGGTCTTGTTGCCGTTGGTGGTGGGTCAGTTGATACGCTGGGTTTGG CCGGACATCGTGGGCAAAGTGTTGGCTAAGTATCGCATTGCGAAGATAAGCACCGCGTGCTTGATTCTGTTGGTT TGGTGAGTTGTTTGACTTGGACCCGTATACTTGTTGAGACAGCAAAACTTACATGAATGGGTATAGGTCAACCTT CTCTTCTTGCTTCGCGACAGGAGCGCTCCAGACTCTTTCCGCTTCTAGTATTGTCTTCGTGGTTCTGTTCAATAT TGCGCTGTATATGTTCCTTACGGCTGTTTGCTTCTATTGTTCTCGCCCGCCGAGGATCATCTCTGGTGTGTCGTT TACGGTGAAAGGGAAGACATTTTATCCCTTCCAGCAGATGAATCCTCAGGAGACTATTGCCGTCTGTTTCTGTGG TCCGGCGAAGAGTACTGCACTGGGCATTCCGCTGCTTTATGCCATGTGGGGTCCGTTGAGTCTGTATATCAAGTC GAAGACGTCGGTGCCTGTGCTGCTGTATACCACGGAGCAGATTTGTGTGGCGCATTTCTTTGTGCATATGTTCAA GTGGTGGCATCGGCGGGTTGAGAGGAAGAGTGCCAGCGTAAGTGATGTGGAGTGTGATGGAGAGGGAAATGCAAA TGAAAATGAGGAGAAGTTGGACGGTTCAGGGTCTGATGGGAGGAATCTGGATAATCAGAGCAAAGGGGCAGATGT GAGTCTGTCCCAGGAGCATAATAATTAA |