Protein ID | Ani_SJS100_1|g7120.t1 |
Gene name | |
Location | scaffold_048:107089..109861 |
Strand | - |
Gene length (bp) | 2772 |
Transcript length (bp) | 2772 |
Coding sequence length (bp) | 2772 |
Protein length (aa) | 924 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF17389 | Bac_rhamnosid6H | Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain | 3.3E-130 | 446 | 798 |
PF08531 | Bac_rhamnosid_N | Alpha-L-rhamnosidase N-terminal domain | 3.6E-54 | 156 | 329 |
PF05592 | Bac_rhamnosid | Bacterial alpha-L-rhamnosidase concanavalin-like domain | 5.6E-26 | 338 | 441 |
PF17390 | Bac_rhamnosid_C | Bacterial alpha-L-rhamnosidase C-terminal domain | 1.6E-20 | 800 | 871 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 54 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g7120.t1 MASQIFIETPTVEQHLTGFGIGTATPRLSWRFLTTDSSPRDWEQTAYEVQLTRSGSSAKTYYVKSNASVLVPWPS DPLQSREIAQVRVRAYGCRAGEEQQAEGATSWSPWRVIECGLLDHTDWVARTIANPEEPQPEAPLRPVRFRKEFQ LPAASSVDKARLYITSFGVYRAFVNGHRVGDQCLAPGWTSYRHRLNYQVFDVGPLLNAGGLNVLAVEVAEGWYAT RLGFLGGRRQLYGDRLAVLAQVEIQLGPKGDRFSMCTDSTWICTPSAIVRSELYDGEAYDAREEDPTWNCARLDQ ASSWVAVREIDFPTAALVAPDAPPVRITEEIPPVSVQKTPSGATVIDFGQNLVGRLRVRSLQKPSGSRVSFIHAE VLENGELGVRPLRHAKCTDEVILNGTELVDWSPQYTFHGFRYVQVNGWDEEIDGSLLLNIKALVMHTDMTRSGWF SCSHPMINQLHTNAWWSMRGNFLSIPTDCPQRDERLGWTGDIQVFCPSANFLYNTAGMLSDWLQDVAAEQLREKD GCVPPFTVPNVISETLWPHTPQAVWDDVVILTPWALYRSYGDQDILRRQYESMLAWIDRGIRRGSDGLWDPELWQ LGDWLDPTAPPEEPGDARTSGTLVADAYLVHITSVMSEVSQVLGQSQNAARFQADYDRLKASFQAKYITATGLLV GDTQTALSLAIVYDLHSTPEAAQAAASRLVHLVRLAKFRVATGFAGTPIITHALTKSGYPQIAYRMLLEKNRPSW MYPITMGATTMWERWDSMLPDGTINPGEMTSFNHYALGSIINWLHSTVAGVSPLSPGWKQIQVAPTPGPTIHSAE AMYDTPYGRLECRWSIEIDADLFHMDLLIPPNSRARVVLPTPKKLSQPAGSREDGDDLWVGSGHHHFSAPFEWRK YTREWPPKPLIPIMRKPEPEDIA* |
Coding | >Ani_SJS100_1|g7120.t1 ATGGCCAGCCAAATCTTCATTGAAACCCCCACTGTTGAGCAACACTTGACCGGCTTTGGCATTGGAACTGCTACT CCGCGTCTGTCATGGCGATTCCTCACCACCGACAGTAGCCCGCGTGACTGGGAACAGACAGCCTACGAAGTGCAA CTTACTCGCTCCGGATCCTCAGCTAAAACCTACTATGTGAAGAGCAATGCATCGGTGCTGGTCCCTTGGCCCAGT GATCCATTACAATCCCGAGAAATCGCACAGGTCCGCGTTCGGGCATACGGGTGCAGGGCCGGCGAGGAGCAACAG GCCGAAGGAGCCACCTCTTGGTCTCCTTGGCGCGTCATTGAGTGCGGACTACTCGATCACACTGACTGGGTAGCC CGAACTATTGCCAATCCGGAGGAACCACAGCCGGAAGCTCCATTGCGGCCGGTGCGTTTCCGTAAGGAATTCCAA CTTCCTGCGGCGAGTTCAGTCGACAAGGCCCGCCTCTATATCACCAGCTTTGGGGTATACCGCGCTTTCGTCAAC GGTCATCGAGTCGGAGATCAGTGCCTCGCCCCCGGGTGGACTAGCTACCGCCATCGCTTGAACTATCAAGTGTTC GATGTAGGACCCCTCCTGAATGCTGGAGGTCTCAACGTCCTCGCGGTAGAGGTTGCAGAGGGATGGTACGCCACT CGCCTCGGCTTCCTTGGTGGGCGAAGACAGCTGTATGGAGATCGGCTGGCCGTACTAGCCCAGGTGGAAATTCAA CTCGGACCCAAGGGAGACCGATTCTCTATGTGTACCGATAGCACTTGGATTTGTACCCCCAGTGCCATCGTCCGC AGTGAGCTGTATGACGGCGAGGCTTATGATGCTCGTGAAGAAGATCCGACCTGGAACTGCGCGCGCCTTGACCAG GCCTCTAGCTGGGTGGCCGTCCGTGAAATTGACTTCCCAACCGCGGCCTTGGTAGCACCGGACGCTCCTCCAGTG CGTATCACCGAGGAGATTCCCCCAGTCTCCGTTCAGAAGACCCCTTCCGGTGCAACCGTCATTGACTTCGGTCAG AACCTGGTTGGTCGACTCCGCGTGCGCTCATTGCAAAAGCCCTCTGGGTCTCGCGTCTCGTTCATCCACGCCGAA GTACTAGAGAATGGCGAGCTCGGGGTTCGACCGCTACGACACGCCAAGTGCACCGATGAAGTCATCCTGAATGGA ACAGAGCTCGTAGATTGGTCGCCACAGTATACATTTCATGGGTTTCGATACGTCCAGGTCAATGGTTGGGATGAG GAAATCGATGGATCACTGCTCCTCAATATCAAGGCCCTCGTGATGCACACTGATATGACCCGCAGCGGATGGTTT TCTTGCTCCCACCCCATGATCAATCAACTCCACACCAATGCTTGGTGGAGTATGCGGGGGAATTTCCTGTCCATC CCCACCGACTGTCCCCAGAGAGATGAACGCCTCGGCTGGACCGGGGATATTCAGGTCTTCTGCCCATCGGCCAAC TTCCTCTACAATACTGCCGGCATGCTGAGCGACTGGCTGCAGGATGTTGCAGCCGAGCAGCTGAGGGAGAAGGAT GGCTGCGTGCCTCCATTTACGGTCCCTAACGTTATCAGCGAGACCCTGTGGCCGCATACGCCGCAGGCCGTGTGG GACGATGTCGTGATCCTGACGCCCTGGGCCCTCTACCGGTCGTATGGAGACCAAGACATCCTCCGCCGCCAATAT GAGAGCATGCTCGCCTGGATCGATCGCGGAATCCGTCGTGGTTCGGATGGACTCTGGGACCCTGAACTTTGGCAA CTGGGAGACTGGCTAGATCCAACAGCGCCGCCCGAGGAACCTGGGGATGCACGCACCAGTGGAACCCTCGTCGCT GATGCCTATCTCGTGCATATCACGTCTGTGATGTCCGAGGTCAGTCAGGTCCTCGGCCAGAGCCAGAATGCCGCA CGATTCCAGGCGGACTATGATCGACTCAAGGCAAGCTTCCAGGCCAAGTATATCACAGCCACTGGGTTGCTGGTC GGTGATACCCAAACGGCACTTAGCCTTGCCATCGTGTACGACCTCCACTCCACTCCCGAAGCAGCCCAGGCTGCG GCATCGCGTCTCGTCCACCTCGTGCGGCTGGCCAAGTTTCGCGTCGCCACCGGGTTTGCGGGCACTCCGATCATA ACGCATGCTCTCACCAAGAGCGGATACCCCCAGATCGCCTACCGGATGCTGCTGGAGAAAAATCGCCCGTCGTGG ATGTATCCCATCACCATGGGAGCGACGACCATGTGGGAGCGGTGGGACAGCATGCTCCCCGACGGGACCATCAAT CCTGGCGAGATGACCAGCTTCAATCACTACGCCCTGGGCTCCATCATCAACTGGCTGCACTCCACTGTGGCCGGC GTCAGCCCTCTATCCCCGGGCTGGAAGCAGATCCAGGTGGCTCCGACTCCTGGGCCCACGATTCACTCGGCTGAA GCCATGTACGATACTCCCTATGGGCGACTGGAATGCCGGTGGTCGATCGAGATTGACGCGGACCTCTTCCATATG GACCTGTTGATACCCCCTAATTCTCGTGCGCGCGTGGTATTGCCGACACCCAAGAAGCTATCCCAGCCCGCTGGT TCTCGTGAAGACGGAGATGATCTCTGGGTGGGTTCGGGACATCACCATTTCTCTGCCCCCTTCGAGTGGAGGAAG TACACTAGGGAATGGCCACCGAAGCCCCTGATTCCAATTATGCGCAAGCCTGAACCGGAGGATATTGCCTGA |
Transcript | >Ani_SJS100_1|g7120.t1 ATGGCCAGCCAAATCTTCATTGAAACCCCCACTGTTGAGCAACACTTGACCGGCTTTGGCATTGGAACTGCTACT CCGCGTCTGTCATGGCGATTCCTCACCACCGACAGTAGCCCGCGTGACTGGGAACAGACAGCCTACGAAGTGCAA CTTACTCGCTCCGGATCCTCAGCTAAAACCTACTATGTGAAGAGCAATGCATCGGTGCTGGTCCCTTGGCCCAGT GATCCATTACAATCCCGAGAAATCGCACAGGTCCGCGTTCGGGCATACGGGTGCAGGGCCGGCGAGGAGCAACAG GCCGAAGGAGCCACCTCTTGGTCTCCTTGGCGCGTCATTGAGTGCGGACTACTCGATCACACTGACTGGGTAGCC CGAACTATTGCCAATCCGGAGGAACCACAGCCGGAAGCTCCATTGCGGCCGGTGCGTTTCCGTAAGGAATTCCAA CTTCCTGCGGCGAGTTCAGTCGACAAGGCCCGCCTCTATATCACCAGCTTTGGGGTATACCGCGCTTTCGTCAAC GGTCATCGAGTCGGAGATCAGTGCCTCGCCCCCGGGTGGACTAGCTACCGCCATCGCTTGAACTATCAAGTGTTC GATGTAGGACCCCTCCTGAATGCTGGAGGTCTCAACGTCCTCGCGGTAGAGGTTGCAGAGGGATGGTACGCCACT CGCCTCGGCTTCCTTGGTGGGCGAAGACAGCTGTATGGAGATCGGCTGGCCGTACTAGCCCAGGTGGAAATTCAA CTCGGACCCAAGGGAGACCGATTCTCTATGTGTACCGATAGCACTTGGATTTGTACCCCCAGTGCCATCGTCCGC AGTGAGCTGTATGACGGCGAGGCTTATGATGCTCGTGAAGAAGATCCGACCTGGAACTGCGCGCGCCTTGACCAG GCCTCTAGCTGGGTGGCCGTCCGTGAAATTGACTTCCCAACCGCGGCCTTGGTAGCACCGGACGCTCCTCCAGTG CGTATCACCGAGGAGATTCCCCCAGTCTCCGTTCAGAAGACCCCTTCCGGTGCAACCGTCATTGACTTCGGTCAG AACCTGGTTGGTCGACTCCGCGTGCGCTCATTGCAAAAGCCCTCTGGGTCTCGCGTCTCGTTCATCCACGCCGAA GTACTAGAGAATGGCGAGCTCGGGGTTCGACCGCTACGACACGCCAAGTGCACCGATGAAGTCATCCTGAATGGA ACAGAGCTCGTAGATTGGTCGCCACAGTATACATTTCATGGGTTTCGATACGTCCAGGTCAATGGTTGGGATGAG GAAATCGATGGATCACTGCTCCTCAATATCAAGGCCCTCGTGATGCACACTGATATGACCCGCAGCGGATGGTTT TCTTGCTCCCACCCCATGATCAATCAACTCCACACCAATGCTTGGTGGAGTATGCGGGGGAATTTCCTGTCCATC CCCACCGACTGTCCCCAGAGAGATGAACGCCTCGGCTGGACCGGGGATATTCAGGTCTTCTGCCCATCGGCCAAC TTCCTCTACAATACTGCCGGCATGCTGAGCGACTGGCTGCAGGATGTTGCAGCCGAGCAGCTGAGGGAGAAGGAT GGCTGCGTGCCTCCATTTACGGTCCCTAACGTTATCAGCGAGACCCTGTGGCCGCATACGCCGCAGGCCGTGTGG GACGATGTCGTGATCCTGACGCCCTGGGCCCTCTACCGGTCGTATGGAGACCAAGACATCCTCCGCCGCCAATAT GAGAGCATGCTCGCCTGGATCGATCGCGGAATCCGTCGTGGTTCGGATGGACTCTGGGACCCTGAACTTTGGCAA CTGGGAGACTGGCTAGATCCAACAGCGCCGCCCGAGGAACCTGGGGATGCACGCACCAGTGGAACCCTCGTCGCT GATGCCTATCTCGTGCATATCACGTCTGTGATGTCCGAGGTCAGTCAGGTCCTCGGCCAGAGCCAGAATGCCGCA CGATTCCAGGCGGACTATGATCGACTCAAGGCAAGCTTCCAGGCCAAGTATATCACAGCCACTGGGTTGCTGGTC GGTGATACCCAAACGGCACTTAGCCTTGCCATCGTGTACGACCTCCACTCCACTCCCGAAGCAGCCCAGGCTGCG GCATCGCGTCTCGTCCACCTCGTGCGGCTGGCCAAGTTTCGCGTCGCCACCGGGTTTGCGGGCACTCCGATCATA ACGCATGCTCTCACCAAGAGCGGATACCCCCAGATCGCCTACCGGATGCTGCTGGAGAAAAATCGCCCGTCGTGG ATGTATCCCATCACCATGGGAGCGACGACCATGTGGGAGCGGTGGGACAGCATGCTCCCCGACGGGACCATCAAT CCTGGCGAGATGACCAGCTTCAATCACTACGCCCTGGGCTCCATCATCAACTGGCTGCACTCCACTGTGGCCGGC GTCAGCCCTCTATCCCCGGGCTGGAAGCAGATCCAGGTGGCTCCGACTCCTGGGCCCACGATTCACTCGGCTGAA GCCATGTACGATACTCCCTATGGGCGACTGGAATGCCGGTGGTCGATCGAGATTGACGCGGACCTCTTCCATATG GACCTGTTGATACCCCCTAATTCTCGTGCGCGCGTGGTATTGCCGACACCCAAGAAGCTATCCCAGCCCGCTGGT TCTCGTGAAGACGGAGATGATCTCTGGGTGGGTTCGGGACATCACCATTTCTCTGCCCCCTTCGAGTGGAGGAAG TACACTAGGGAATGGCCACCGAAGCCCCTGATTCCAATTATGCGCAAGCCTGAACCGGAGGATATTGCCTGA |
Gene | >Ani_SJS100_1|g7120.t1 ATGGCCAGCCAAATCTTCATTGAAACCCCCACTGTTGAGCAACACTTGACCGGCTTTGGCATTGGAACTGCTACT CCGCGTCTGTCATGGCGATTCCTCACCACCGACAGTAGCCCGCGTGACTGGGAACAGACAGCCTACGAAGTGCAA CTTACTCGCTCCGGATCCTCAGCTAAAACCTACTATGTGAAGAGCAATGCATCGGTGCTGGTCCCTTGGCCCAGT GATCCATTACAATCCCGAGAAATCGCACAGGTCCGCGTTCGGGCATACGGGTGCAGGGCCGGCGAGGAGCAACAG GCCGAAGGAGCCACCTCTTGGTCTCCTTGGCGCGTCATTGAGTGCGGACTACTCGATCACACTGACTGGGTAGCC CGAACTATTGCCAATCCGGAGGAACCACAGCCGGAAGCTCCATTGCGGCCGGTGCGTTTCCGTAAGGAATTCCAA CTTCCTGCGGCGAGTTCAGTCGACAAGGCCCGCCTCTATATCACCAGCTTTGGGGTATACCGCGCTTTCGTCAAC GGTCATCGAGTCGGAGATCAGTGCCTCGCCCCCGGGTGGACTAGCTACCGCCATCGCTTGAACTATCAAGTGTTC GATGTAGGACCCCTCCTGAATGCTGGAGGTCTCAACGTCCTCGCGGTAGAGGTTGCAGAGGGATGGTACGCCACT CGCCTCGGCTTCCTTGGTGGGCGAAGACAGCTGTATGGAGATCGGCTGGCCGTACTAGCCCAGGTGGAAATTCAA CTCGGACCCAAGGGAGACCGATTCTCTATGTGTACCGATAGCACTTGGATTTGTACCCCCAGTGCCATCGTCCGC AGTGAGCTGTATGACGGCGAGGCTTATGATGCTCGTGAAGAAGATCCGACCTGGAACTGCGCGCGCCTTGACCAG GCCTCTAGCTGGGTGGCCGTCCGTGAAATTGACTTCCCAACCGCGGCCTTGGTAGCACCGGACGCTCCTCCAGTG CGTATCACCGAGGAGATTCCCCCAGTCTCCGTTCAGAAGACCCCTTCCGGTGCAACCGTCATTGACTTCGGTCAG AACCTGGTTGGTCGACTCCGCGTGCGCTCATTGCAAAAGCCCTCTGGGTCTCGCGTCTCGTTCATCCACGCCGAA GTACTAGAGAATGGCGAGCTCGGGGTTCGACCGCTACGACACGCCAAGTGCACCGATGAAGTCATCCTGAATGGA ACAGAGCTCGTAGATTGGTCGCCACAGTATACATTTCATGGGTTTCGATACGTCCAGGTCAATGGTTGGGATGAG GAAATCGATGGATCACTGCTCCTCAATATCAAGGCCCTCGTGATGCACACTGATATGACCCGCAGCGGATGGTTT TCTTGCTCCCACCCCATGATCAATCAACTCCACACCAATGCTTGGTGGAGTATGCGGGGGAATTTCCTGTCCATC CCCACCGACTGTCCCCAGAGAGATGAACGCCTCGGCTGGACCGGGGATATTCAGGTCTTCTGCCCATCGGCCAAC TTCCTCTACAATACTGCCGGCATGCTGAGCGACTGGCTGCAGGATGTTGCAGCCGAGCAGCTGAGGGAGAAGGAT GGCTGCGTGCCTCCATTTACGGTCCCTAACGTTATCAGCGAGACCCTGTGGCCGCATACGCCGCAGGCCGTGTGG GACGATGTCGTGATCCTGACGCCCTGGGCCCTCTACCGGTCGTATGGAGACCAAGACATCCTCCGCCGCCAATAT GAGAGCATGCTCGCCTGGATCGATCGCGGAATCCGTCGTGGTTCGGATGGACTCTGGGACCCTGAACTTTGGCAA CTGGGAGACTGGCTAGATCCAACAGCGCCGCCCGAGGAACCTGGGGATGCACGCACCAGTGGAACCCTCGTCGCT GATGCCTATCTCGTGCATATCACGTCTGTGATGTCCGAGGTCAGTCAGGTCCTCGGCCAGAGCCAGAATGCCGCA CGATTCCAGGCGGACTATGATCGACTCAAGGCAAGCTTCCAGGCCAAGTATATCACAGCCACTGGGTTGCTGGTC GGTGATACCCAAACGGCACTTAGCCTTGCCATCGTGTACGACCTCCACTCCACTCCCGAAGCAGCCCAGGCTGCG GCATCGCGTCTCGTCCACCTCGTGCGGCTGGCCAAGTTTCGCGTCGCCACCGGGTTTGCGGGCACTCCGATCATA ACGCATGCTCTCACCAAGAGCGGATACCCCCAGATCGCCTACCGGATGCTGCTGGAGAAAAATCGCCCGTCGTGG ATGTATCCCATCACCATGGGAGCGACGACCATGTGGGAGCGGTGGGACAGCATGCTCCCCGACGGGACCATCAAT CCTGGCGAGATGACCAGCTTCAATCACTACGCCCTGGGCTCCATCATCAACTGGCTGCACTCCACTGTGGCCGGC GTCAGCCCTCTATCCCCGGGCTGGAAGCAGATCCAGGTGGCTCCGACTCCTGGGCCCACGATTCACTCGGCTGAA GCCATGTACGATACTCCCTATGGGCGACTGGAATGCCGGTGGTCGATCGAGATTGACGCGGACCTCTTCCATATG GACCTGTTGATACCCCCTAATTCTCGTGCGCGCGTGGTATTGCCGACACCCAAGAAGCTATCCCAGCCCGCTGGT TCTCGTGAAGACGGAGATGATCTCTGGGTGGGTTCGGGACATCACCATTTCTCTGCCCCCTTCGAGTGGAGGAAG TACACTAGGGAATGGCCACCGAAGCCCCTGATTCCAATTATGCGCAAGCCTGAACCGGAGGATATTGCCTGA |