© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g7110.t1 |
| Gene name | |
| Location | scaffold_048:76890..79667 |
| Strand | - |
| Gene length (bp) | 2777 |
| Transcript length (bp) | 2463 |
| Coding sequence length (bp) | 2463 |
| Protein length (aa) | 821 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00004 | AAA | ATPase family associated with various cellular activities (AAA) | 3.9E-47 | 259 | 388 |
| PF00004 | AAA | ATPase family associated with various cellular activities (AAA) | 4.9E-47 | 533 | 665 |
| PF17862 | AAA_lid_3 | AAA+ lid domain | 3.9E-13 | 411 | 450 |
| PF17862 | AAA_lid_3 | AAA+ lid domain | 1.2E-07 | 688 | 727 |
| PF02359 | CDC48_N | Cell division protein 48 (CDC48), N-terminal domain | 2.2E-18 | 44 | 124 |
| PF07724 | AAA_2 | AAA domain (Cdc48 subfamily) | 1.1E-07 | 259 | 356 |
| PF07728 | AAA_5 | AAA domain (dynein-related subfamily) | 2.2E-05 | 259 | 377 |
| PF02933 | CDC48_2 | Cell division protein 48 (CDC48), domain 2 | 9.0E-09 | 145 | 208 |
| PF09336 | Vps4_C | Vps4 C terminal oligomerisation domain | 1.6E-05 | 738 | 785 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005524 | ATP binding | Yes |
| GO:0016887 | ATP hydrolysis activity | Yes |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0043167 | ion binding | No |
| GO:0032555 | purine ribonucleotide binding | No |
| GO:0097367 | carbohydrate derivative binding | No |
| GO:0016787 | hydrolase activity | No |
| GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | No |
| GO:0003674 | molecular_function | No |
| GO:0017076 | purine nucleotide binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0032553 | ribonucleotide binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0035639 | purine ribonucleoside triphosphate binding | No |
| GO:0016817 | hydrolase activity, acting on acid anhydrides | No |
| GO:0030554 | adenyl nucleotide binding | No |
| GO:0043168 | anion binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0032559 | adenyl ribonucleotide binding | No |
| GO:0005488 | binding | No |
| GO:0016462 | pyrophosphatase activity | No |
| GO:0017111 | nucleoside-triphosphatase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 14 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g7110.t1 MSSEPDHTHDKKRVNLHDASGADKKEELDTSTAILKKKKKPNSLIVTDAVNDDNSVIALSNNTMDTLQLFRGDTV LVKGKKRKDTVLIVLADDDLDDGSARINRVVRHNLRVKHGDIITVHPCPDIKYAKRIAVLPIADTVEGLTGSLFD VYLAPYFREAYRPVRQGDLFTVRGGMRQVEFKVVEVDPPEYGIVAQDTIIHCEGEPIQREDEEGNLNEVGYDDIG GCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGES ESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPAL RRFGRFDREVDIGIPDPTGRLEILSIHTKNMKLGDDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKMDLIDL DEDTIDAEVLDSLGVTMENFRYALGVSNPSALREVAVVEVPNVRWEDIGGLEEVKRELIESVQYPVDHPEKFQKF GLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDS IAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQASRESI LKAQLRKTPIAGDIDLSFIASKTHGFSGADLGFVTQRAVKLAIKQSIGADIERQKQREAQGEDVKMEDEEVEEED PVPELTRAHFEEAMKSARRSVSDVEIRRYEAFAQSLKNSGGSSFFRFPSAGEVTDNNTFGEAGNDDSLYD* |
| Coding | >Ani_SJS100_1|g7110.t1 ATGAGCTCAGAACCCGATCACACCCACGACAAGAAGAGGGTGAACCTCCATGACGCCTCCGGCGCCGACAAGAAA GAGGAACTCGACACCTCGACGGCTATCTTGAAGAAGAAGAAGAAGCCTAACTCCCTCATTGTCACTGATGCCGTC AACGATGACAACTCCGTTATCGCCCTCTCCAACAACACAATGGACACCCTCCAGCTGTTCCGGGGTGACACCGTC CTCGTCAAGGGCAAGAAGCGCAAGGACACCGTTTTGATTGTTTTGGCCGATGATGATCTTGATGATGGAAGCGCT CGCATCAACCGTGTTGTGAGACACAACCTCCGTGTCAAGCACGGCGATATCATCACCGTCCACCCTTGCCCCGAC ATCAAATACGCCAAGCGTATTGCCGTTCTTCCCATCGCCGACACCGTTGAGGGCCTGACTGGCTCCCTCTTCGAT GTTTACCTCGCCCCCTACTTCCGCGAAGCCTACAGACCCGTGAGACAGGGAGACCTGTTCACAGTAAGAGGTGGT ATGAGACAAGTGGAATTCAAGGTTGTTGAGGTGGACCCCCCAGAGTATGGTATTGTGGCTCAAGATACCATCATC CACTGCGAGGGTGAGCCGATCCAGCGCGAGGATGAGGAGGGCAACCTCAACGAGGTCGGTTACGACGACATCGGT GGCTGCAGGAAGCAGATGGCACAGATCCGTGAATTGGTCGAGCTGCCCCTTCGCCACCCTCAGCTCTTCAAGTCC ATCGGTATCAAGCCTCCTCGTGGTATCCTCATGTACGGTCCTCCGGGTACCGGTAAGACTCTGATGGCTCGTGCC GTGGCCAACGAGACCGGCGCTTTCTTCTTCTTGATCAACGGTCCCGAGATCATGTCCAAGATGGCTGGTGAATCC GAGTCCAACCTGCGCAAGGCCTTCGAGGAAGCCGAGAAGAACTCCCCTGCCATCATCTTCATTGATGAGATCGAT TCCATCGCCCCCAAGCGTGAGAAGACCAACGGTGAAGTCGAGCGCCGTGTCGTCTCTCAGCTTCTGACCCTGATG GACGGTATGAAGGCCCGTTCCAACGTTGTTGTCATGGCCGCCACCAACCGCCCCAACTCCATCGACCCCGCCCTC CGCCGTTTCGGTCGTTTCGATCGTGAGGTCGACATCGGTATCCCCGACCCCACTGGCCGTCTGGAGATCCTCTCG ATCCACACCAAGAACATGAAGCTGGGTGATGATGTCGACTTGGAGACCATTGCCGCCGAGACCCACGGTTACGTC GGTTCCGATCTTGCCTCTCTGTGCTCCGAGGCCGCCATGCAGCAGATCCGTGAGAAGATGGATCTGATTGACCTC GACGAGGACACCATTGACGCTGAGGTCCTTGACTCTCTTGGTGTTACCATGGAGAACTTCCGTTACGCCCTTGGT GTCTCCAACCCCTCCGCTCTGCGCGAGGTTGCCGTTGTCGAGGTGCCCAACGTCCGTTGGGAGGACATTGGTGGT CTGGAGGAGGTCAAGCGCGAGCTCATCGAGAGCGTCCAGTACCCTGTCGACCACCCCGAGAAGTTCCAGAAGTTT GGTCTTTCGCCTTCCCGCGGTGTTTTGTTCTATGGCCCTCCCGGTACTGGTAAAACCATGCTTGCCAAGGCCGTG GCCAACGAATGTGCTGCCAACTTCATCTCGGTCAAGGGTCCTGAGCTGCTGAGCATGTGGTTCGGTGAGTCCGAG AGCAACATCCGTGATATCTTCGACAAGGCTCGCGCTGCTGCTCCTTGCGTTGTTTTCCTGGATGAGTTGGATTCC ATCGCGAAGTCTCGTGGTGGCTCTGTCGGTGATGCCGGCGGTGCCTCTGACCGTGTCGTCAACCAGCTCCTGACC GAGATGGACGGTATGACCTCCAAGAAGAACGTCTTCGTCATCGGTGCCACGAACAGACCCGAGCAGCTCGATGCC GCTCTGGTCCGTCCTGGTCGTCTTGACACCCTGGTCTACGTTCCTCTGCCGGACCAGGCCTCTCGTGAGAGCATT CTCAAAGCCCAGCTCCGCAAGACCCCTATTGCTGGCGATATCGACCTTTCCTTCATTGCCAGCAAGACCCACGGA TTCTCCGGTGCTGATCTTGGCTTCGTCACTCAGCGTGCTGTCAAGCTTGCCATCAAGCAGTCCATCGGCGCTGAC ATCGAACGCCAGAAGCAGCGTGAGGCTCAGGGCGAGGATGTCAAGATGGAGGACGAGGAGGTTGAGGAGGAGGAC CCGGTGCCGGAGCTTACCCGGGCACACTTCGAGGAGGCGATGAAGTCGGCCAGACGCTCCGTCAGCGACGTGGAG ATTCGCCGGTACGAGGCGTTTGCTCAGAGCTTGAAGAACTCGGGCGGCAGCAGCTTCTTCCGCTTCCCGTCGGCG GGTGAGGTGACGGACAACAACACGTTCGGTGAAGCCGGCAATGACGACAGCCTCTATGACTAG |
| Transcript | >Ani_SJS100_1|g7110.t1 ATGAGCTCAGAACCCGATCACACCCACGACAAGAAGAGGGTGAACCTCCATGACGCCTCCGGCGCCGACAAGAAA GAGGAACTCGACACCTCGACGGCTATCTTGAAGAAGAAGAAGAAGCCTAACTCCCTCATTGTCACTGATGCCGTC AACGATGACAACTCCGTTATCGCCCTCTCCAACAACACAATGGACACCCTCCAGCTGTTCCGGGGTGACACCGTC CTCGTCAAGGGCAAGAAGCGCAAGGACACCGTTTTGATTGTTTTGGCCGATGATGATCTTGATGATGGAAGCGCT CGCATCAACCGTGTTGTGAGACACAACCTCCGTGTCAAGCACGGCGATATCATCACCGTCCACCCTTGCCCCGAC ATCAAATACGCCAAGCGTATTGCCGTTCTTCCCATCGCCGACACCGTTGAGGGCCTGACTGGCTCCCTCTTCGAT GTTTACCTCGCCCCCTACTTCCGCGAAGCCTACAGACCCGTGAGACAGGGAGACCTGTTCACAGTAAGAGGTGGT ATGAGACAAGTGGAATTCAAGGTTGTTGAGGTGGACCCCCCAGAGTATGGTATTGTGGCTCAAGATACCATCATC CACTGCGAGGGTGAGCCGATCCAGCGCGAGGATGAGGAGGGCAACCTCAACGAGGTCGGTTACGACGACATCGGT GGCTGCAGGAAGCAGATGGCACAGATCCGTGAATTGGTCGAGCTGCCCCTTCGCCACCCTCAGCTCTTCAAGTCC ATCGGTATCAAGCCTCCTCGTGGTATCCTCATGTACGGTCCTCCGGGTACCGGTAAGACTCTGATGGCTCGTGCC GTGGCCAACGAGACCGGCGCTTTCTTCTTCTTGATCAACGGTCCCGAGATCATGTCCAAGATGGCTGGTGAATCC GAGTCCAACCTGCGCAAGGCCTTCGAGGAAGCCGAGAAGAACTCCCCTGCCATCATCTTCATTGATGAGATCGAT TCCATCGCCCCCAAGCGTGAGAAGACCAACGGTGAAGTCGAGCGCCGTGTCGTCTCTCAGCTTCTGACCCTGATG GACGGTATGAAGGCCCGTTCCAACGTTGTTGTCATGGCCGCCACCAACCGCCCCAACTCCATCGACCCCGCCCTC CGCCGTTTCGGTCGTTTCGATCGTGAGGTCGACATCGGTATCCCCGACCCCACTGGCCGTCTGGAGATCCTCTCG ATCCACACCAAGAACATGAAGCTGGGTGATGATGTCGACTTGGAGACCATTGCCGCCGAGACCCACGGTTACGTC GGTTCCGATCTTGCCTCTCTGTGCTCCGAGGCCGCCATGCAGCAGATCCGTGAGAAGATGGATCTGATTGACCTC GACGAGGACACCATTGACGCTGAGGTCCTTGACTCTCTTGGTGTTACCATGGAGAACTTCCGTTACGCCCTTGGT GTCTCCAACCCCTCCGCTCTGCGCGAGGTTGCCGTTGTCGAGGTGCCCAACGTCCGTTGGGAGGACATTGGTGGT CTGGAGGAGGTCAAGCGCGAGCTCATCGAGAGCGTCCAGTACCCTGTCGACCACCCCGAGAAGTTCCAGAAGTTT GGTCTTTCGCCTTCCCGCGGTGTTTTGTTCTATGGCCCTCCCGGTACTGGTAAAACCATGCTTGCCAAGGCCGTG GCCAACGAATGTGCTGCCAACTTCATCTCGGTCAAGGGTCCTGAGCTGCTGAGCATGTGGTTCGGTGAGTCCGAG AGCAACATCCGTGATATCTTCGACAAGGCTCGCGCTGCTGCTCCTTGCGTTGTTTTCCTGGATGAGTTGGATTCC ATCGCGAAGTCTCGTGGTGGCTCTGTCGGTGATGCCGGCGGTGCCTCTGACCGTGTCGTCAACCAGCTCCTGACC GAGATGGACGGTATGACCTCCAAGAAGAACGTCTTCGTCATCGGTGCCACGAACAGACCCGAGCAGCTCGATGCC GCTCTGGTCCGTCCTGGTCGTCTTGACACCCTGGTCTACGTTCCTCTGCCGGACCAGGCCTCTCGTGAGAGCATT CTCAAAGCCCAGCTCCGCAAGACCCCTATTGCTGGCGATATCGACCTTTCCTTCATTGCCAGCAAGACCCACGGA TTCTCCGGTGCTGATCTTGGCTTCGTCACTCAGCGTGCTGTCAAGCTTGCCATCAAGCAGTCCATCGGCGCTGAC ATCGAACGCCAGAAGCAGCGTGAGGCTCAGGGCGAGGATGTCAAGATGGAGGACGAGGAGGTTGAGGAGGAGGAC CCGGTGCCGGAGCTTACCCGGGCACACTTCGAGGAGGCGATGAAGTCGGCCAGACGCTCCGTCAGCGACGTGGAG ATTCGCCGGTACGAGGCGTTTGCTCAGAGCTTGAAGAACTCGGGCGGCAGCAGCTTCTTCCGCTTCCCGTCGGCG GGTGAGGTGACGGACAACAACACGTTCGGTGAAGCCGGCAATGACGACAGCCTCTATGACTAG |
| Gene | >Ani_SJS100_1|g7110.t1 ATGAGCTCAGAACCCGATCACACCCACGACAAGAAGAGGGTGAACCTCCAGTATGTGATGGAACTTCCTCTGGCA TCCACTTCTCCATCGTTCCAAGAAGCTAACCTCATCGCACAGTGACGCCTCCGGCGCCGACAAGAAAGAGGTAAA GACTTTTGCCTGCACAACGGGAAGGGACCTTGATGGCGAATACTGACAACCACCGCGAAATAGGAACTCGACACC TCGACGGCTATCTTGAAGAAGAAGAAGAAGCCTAACTCCCTCATGTAAGCTAGTTCTGGCCTTGGTGCGGGGATA CTGGTTGGGTACTGACTGTCTGGGTACTAGTGTCACTGATGCCGTCAACGATGACAACTCCGTTATCGCCCTCTC CAACAACACAATGGACACCCTCCAGCTGTTCCGGGGTGACACCGTCCTCGTCAAGGGCAAGAAGCGCAAGGACAC CGTTTTGATTGTTTTGGCCGATGATGATCTTGATGATGGAAGCGCTCGCATCAACCGTGTTGTGAGACACAACCT CCGTGTCAAGCACGGCGATATCATCACCGTCCACCCTTGCCCCGACATCAAATACGTGAGTTCGACTACTCTCCA GCGTTATCCAGGCGAGTTCTTACTAACCTCGCTTGTTATCACCTACAGGCCAAGCGTATTGCCGTTCTTCCCATC GCCGACACCGTTGAGGGCCTGACTGGCTCCCTCTTCGATGTTTACCTCGCCCCCTACTTCCGCGAAGCCTACAGA CCCGTGAGACAGGGAGACCTGTTCACAGTAAGAGGTGGTATGAGACAAGTGGAATTCAAGGTTGTTGAGGTGGAC CCCCCAGAGTATGGTATTGTGGCTCAAGATACCATCATCCACTGCGAGGGTGAGCCGATCCAGCGCGAGGATGAG GAGGGCAACCTCAACGAGGTCGGTTACGACGACATCGGTGGCTGCAGGAAGCAGATGGCACAGATCCGTGAATTG GTCGAGCTGCCCCTTCGCCACCCTCAGCTCTTCAAGTCCATCGGTATCAAGCCTCCTCGTGGTATCCTCATGTAC GGTCCTCCGGGTACCGGTAAGACTCTGATGGCTCGTGCCGTGGCCAACGAGACCGGCGCTTTCTTCTTCTTGATC AACGGTCCCGAGATCATGTCCAAGATGGCTGGTGAATCCGAGTCCAACCTGCGCAAGGCCTTCGAGGAAGCCGAG AAGAACTCCCCTGCCATCATCTTCATTGATGAGATCGATTCCATCGCCCCCAAGCGTGAGAAGACCAACGGTGAA GTCGAGCGCCGTGTCGTCTCTCAGCTTCTGACCCTGATGGACGGTATGAAGGCCCGTTCCAACGTTGTTGTCATG GCCGCCACCAACCGCCCCAACTCCATCGACCCCGCCCTCCGCCGTTTCGGTCGTTTCGATCGTGAGGTCGACATC GGTATCCCCGACCCCACTGGCCGTCTGGAGATCCTCTCGATCCACACCAAGAACATGAAGCTGGGTGATGATGTC GACTTGGAGACCATTGCCGCCGAGACCCACGGTTACGTCGGTTCCGATCTTGCCTCTCTGTGCTCCGAGGCCGCC ATGCAGCAGATCCGTGAGAAGATGGATCTGATTGACCTCGACGAGGACACCATTGACGCTGAGGTCCTTGACTCT CTTGGTGTTACCATGGAGAACTTCCGTTACGCCCTTGGTGTCTCCAACCCCTCCGCTCTGCGCGAGGTTGCCGTT GTCGAGGTGCCCAACGTCCGTTGGGAGGACATTGGTGGTCTGGAGGAGGTCAAGCGCGAGCTCATCGAGAGCGTC CAGTACCCTGTCGACCACCCCGAGAAGTTCCAGAAGTTTGGTCTTTCGCCTTCCCGCGGTGTTTTGTTCTATGGC CCTCCCGGTACTGGTAAAACCATGCTTGCCAAGGCCGTGGCCAACGAATGTGCTGCCAACTTCATCTCGGTCAAG GGTCCTGAGCTGCTGAGCATGTGGTTCGGTGAGTCCGAGAGCAACATCCGTGATATCTTCGACAAGGCTCGCGCT GCTGCTCCTTGCGTTGTTTTCCTGGATGAGTTGGATTCCATCGCGAAGTCTCGTGGTGGCTCTGTCGGTGATGCC GGCGGTGCCTCTGACCGTGTCGTCAACCAGCTCCTGACCGGTAAGTTTGTTGCCTATATTATACATGGGTAGTTA CTAATTTCCAAACAGAGATGGACGGTATGACCTCCAAGAAGAACGTCTTCGTCATCGGTGCCACGAACAGACCCG AGCAGCTCGATGCCGCTCTGGTCCGTCCTGGTCGTCTTGACACCCTGGTCTACGTTCCTCTGCCGGACCAGGCCT CTCGTGAGAGCATTCTCAAAGCCCAGCTCCGCAAGACCCCTATTGCTGGCGATATCGACCTTTCCTTCATTGCCA GCAAGACCCACGGATTCTCCGGTGCTGATCTTGGCTTCGTCACTCAGCGTGCTGTCAAGCTTGCCATCAAGCAGT CCATCGGCGCTGACATCGAACGCCAGAAGCAGCGTGAGGCTCAGGGCGAGGATGTCAAGATGGAGGACGAGGAGG TTGAGGAGGAGGACCCGGTGCCGGAGCTTACCCGGGCACACTTCGAGGAGGCGATGAAGTCGGCCAGACGCTCCG TCAGCGACGTGGAGATTCGCCGGTACGAGGCGTTTGCTCAGAGCTTGAAGAACTCGGGCGGCAGCAGCTTCTTCC GCTTCCCGTCGGCGGGTGAGGTGACGGACAACAACACGTTCGGTGAAGCCGGCAATGACGACAGCCTCTATGACT AG |