Protein ID | Ani_SJS100_1|g7087.t1 |
Gene name | |
Location | scaffold_047:259016..260311 |
Strand | - |
Gene length (bp) | 1295 |
Transcript length (bp) | 1242 |
Coding sequence length (bp) | 1242 |
Protein length (aa) | 414 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00153 | Mito_carr | Mitochondrial carrier protein | 5.7E-22 | 62 | 155 |
PF00153 | Mito_carr | Mitochondrial carrier protein | 2.3E-21 | 160 | 256 |
PF00153 | Mito_carr | Mitochondrial carrier protein | 2.4E-17 | 276 | 391 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 49 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 124 | 146 | 22 |
2 | 225 | 247 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g7087.t1 MFSEGHGPSGAASGSQEQQGTTSDSSPSSTLHVSAESPSQPTLLDRFEMLATRVPDYYITPFCGASAGVASGIVT CPLDVIKTKLQAQGGFARRRGKAVEAKTLYRGMLGTGRVIWREDGIRGLYQGLGPMLLGYLPTWAVYLAVYDRSR EYFYETTDSWWLSRGYASITAGACSTLATNPIWVIKTRLMSQSLRSSSEGYRAPWQYKNTWDAARKMYRSEGIRS FYSGLTPALLGLAHVAIQFPLYEYLKMAFTGYSIGEHPDTGSSHWVGITSATFLSKVCASTATYPHEVLRTRLQT QQRTSPAASPEEISFRGGMDHPQGHSRPPGAASSDGMPNRPRYTGIIRTCQTILREEGWRAFYSGIGTNLFRAVP AAMTTMLTYEYLKKTIGHVQHEGELKLQKLEATSDSGI* |
Coding | >Ani_SJS100_1|g7087.t1 ATGTTCTCTGAAGGCCATGGCCCTTCGGGGGCTGCCAGCGGCTCTCAAGAGCAGCAGGGTACAACTTCGGACAGT TCGCCTTCGTCGACGCTTCATGTATCGGCCGAGTCCCCATCCCAGCCCACTCTTCTCGATCGCTTCGAAATGCTC GCTACACGTGTGCCGGATTATTACATCACGCCGTTCTGCGGGGCCAGTGCGGGCGTAGCCTCGGGAATCGTCACC TGCCCTCTCGATGTGATCAAGACCAAGCTGCAGGCTCAGGGTGGATTCGCGCGACGACGTGGCAAGGCGGTCGAG GCCAAAACACTGTACCGGGGTATGCTAGGAACTGGACGAGTAATATGGCGGGAGGATGGTATCCGAGGCCTTTAT CAAGGATTGGGCCCCATGCTCCTGGGATACCTGCCGACGTGGGCGGTCTATTTAGCAGTCTACGATCGGTCTCGG GAGTATTTCTACGAAACAACAGATAGTTGGTGGCTCTCACGAGGTTACGCCTCGATAACGGCGGGCGCTTGCTCG ACACTTGCGACGAATCCGATTTGGGTGATTAAGACACGACTTATGTCACAGAGCCTCCGGTCGAGCAGCGAAGGC TACCGGGCTCCTTGGCAATACAAAAACACATGGGATGCGGCCCGCAAAATGTACAGAAGTGAAGGAATTCGTTCG TTCTACTCCGGCCTTACTCCTGCGCTGCTGGGGCTGGCGCATGTGGCCATCCAGTTCCCTCTCTACGAATATCTG AAGATGGCATTTACTGGCTATAGTATTGGCGAACATCCCGATACTGGCAGCTCACACTGGGTGGGCATTACATCT GCGACGTTCCTGAGTAAGGTGTGTGCCAGCACTGCGACATACCCGCATGAAGTGCTTCGGACACGACTCCAAACA CAGCAGAGGACATCACCGGCGGCCTCACCCGAAGAGATCTCGTTCCGCGGCGGGATGGATCACCCCCAGGGTCAT AGCAGGCCCCCGGGTGCTGCTTCGTCGGACGGGATGCCCAATCGACCCCGGTACACGGGAATCATTCGCACATGC CAGACCATTCTGAGAGAAGAAGGCTGGCGCGCGTTCTACTCTGGGATCGGCACGAACCTGTTCCGGGCGGTCCCG GCTGCGATGACTACCATGCTCACTTATGAGTACTTGAAGAAAACGATTGGACACGTGCAACATGAGGGAGAGCTG AAGTTGCAGAAGCTGGAGGCCACATCAGACAGTGGGATCTAA |
Transcript | >Ani_SJS100_1|g7087.t1 ATGTTCTCTGAAGGCCATGGCCCTTCGGGGGCTGCCAGCGGCTCTCAAGAGCAGCAGGGTACAACTTCGGACAGT TCGCCTTCGTCGACGCTTCATGTATCGGCCGAGTCCCCATCCCAGCCCACTCTTCTCGATCGCTTCGAAATGCTC GCTACACGTGTGCCGGATTATTACATCACGCCGTTCTGCGGGGCCAGTGCGGGCGTAGCCTCGGGAATCGTCACC TGCCCTCTCGATGTGATCAAGACCAAGCTGCAGGCTCAGGGTGGATTCGCGCGACGACGTGGCAAGGCGGTCGAG GCCAAAACACTGTACCGGGGTATGCTAGGAACTGGACGAGTAATATGGCGGGAGGATGGTATCCGAGGCCTTTAT CAAGGATTGGGCCCCATGCTCCTGGGATACCTGCCGACGTGGGCGGTCTATTTAGCAGTCTACGATCGGTCTCGG GAGTATTTCTACGAAACAACAGATAGTTGGTGGCTCTCACGAGGTTACGCCTCGATAACGGCGGGCGCTTGCTCG ACACTTGCGACGAATCCGATTTGGGTGATTAAGACACGACTTATGTCACAGAGCCTCCGGTCGAGCAGCGAAGGC TACCGGGCTCCTTGGCAATACAAAAACACATGGGATGCGGCCCGCAAAATGTACAGAAGTGAAGGAATTCGTTCG TTCTACTCCGGCCTTACTCCTGCGCTGCTGGGGCTGGCGCATGTGGCCATCCAGTTCCCTCTCTACGAATATCTG AAGATGGCATTTACTGGCTATAGTATTGGCGAACATCCCGATACTGGCAGCTCACACTGGGTGGGCATTACATCT GCGACGTTCCTGAGTAAGGTGTGTGCCAGCACTGCGACATACCCGCATGAAGTGCTTCGGACACGACTCCAAACA CAGCAGAGGACATCACCGGCGGCCTCACCCGAAGAGATCTCGTTCCGCGGCGGGATGGATCACCCCCAGGGTCAT AGCAGGCCCCCGGGTGCTGCTTCGTCGGACGGGATGCCCAATCGACCCCGGTACACGGGAATCATTCGCACATGC CAGACCATTCTGAGAGAAGAAGGCTGGCGCGCGTTCTACTCTGGGATCGGCACGAACCTGTTCCGGGCGGTCCCG GCTGCGATGACTACCATGCTCACTTATGAGTACTTGAAGAAAACGATTGGACACGTGCAACATGAGGGAGAGCTG AAGTTGCAGAAGCTGGAGGCCACATCAGACAGTGGGATCTAA |
Gene | >Ani_SJS100_1|g7087.t1 ATGTTCTCTGAAGGCCATGGCCCTTCGGGGGCTGCCAGCGGCTCTCAAGAGCAGCAGGGTACAACTTCGGACAGT TCGCCTTCGTCGACGCTTCATGTATCGGCCGAGTCCCCATCCCAGCCCACTCTTCTCGATCGCTTCGAAATGCTC GCTACACGTGTGCCGGATTATTACATCACGCCGTTCTGCGGGGCCAGTGCGGGCGTAGCCTCGGGAATCGTCACC TGCCCTCTCGATGTGATCAAGACCAAGCTGCAGGCTCAGGGTGGATTCGCGCGACGACGTGGCAAGGCGGTCGAG GCCAAAACACTGTACCGGGGTATGCTAGGAACTGGACGAGTAATATGGCGGGAGGATGGTATCCGAGGCCTTTAT CAAGGATTGGGCCCCATGCTCCTGGGATACCTGCCGACGTGGGCGGTCTATTTAGCAGTCTACGATCGGTCTCGG GAGTATTTCTACGAAACAACAGGTGAGGAGTGATGCTACGGAGAATGGGTGATGGTGAGGCTGACAGTGGAACAG ATAGTTGGTGGCTCTCACGAGGTTACGCCTCGATAACGGCGGGCGCTTGCTCGACACTTGCGACGAATCCGATTT GGGTGATTAAGACACGACTTATGTCACAGAGCCTCCGGTCGAGCAGCGAAGGCTACCGGGCTCCTTGGCAATACA AAAACACATGGGATGCGGCCCGCAAAATGTACAGAAGTGAAGGAATTCGTTCGTTCTACTCCGGCCTTACTCCTG CGCTGCTGGGGCTGGCGCATGTGGCCATCCAGTTCCCTCTCTACGAATATCTGAAGATGGCATTTACTGGCTATA GTATTGGCGAACATCCCGATACTGGCAGCTCACACTGGGTGGGCATTACATCTGCGACGTTCCTGAGTAAGGTGT GTGCCAGCACTGCGACATACCCGCATGAAGTGCTTCGGACACGACTCCAAACACAGCAGAGGACATCACCGGCGG CCTCACCCGAAGAGATCTCGTTCCGCGGCGGGATGGATCACCCCCAGGGTCATAGCAGGCCCCCGGGTGCTGCTT CGTCGGACGGGATGCCCAATCGACCCCGGTACACGGGAATCATTCGCACATGCCAGACCATTCTGAGAGAAGAAG GCTGGCGCGCGTTCTACTCTGGGATCGGCACGAACCTGTTCCGGGCGGTCCCGGCTGCGATGACTACCATGCTCA CTTATGAGTACTTGAAGAAAACGATTGGACACGTGCAACATGAGGGAGAGCTGAAGTTGCAGAAGCTGGAGGCCA CATCAGACAGTGGGATCTAA |