© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g7077.t1 |
| Gene name | |
| Location | scaffold_047:228381..231191 |
| Strand | - |
| Gene length (bp) | 2810 |
| Transcript length (bp) | 2598 |
| Coding sequence length (bp) | 2598 |
| Protein length (aa) | 866 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02867 | Ribonuc_red_lgC | Ribonucleotide reductase, barrel domain | 1.1E-189 | 216 | 739 |
| PF00317 | Ribonuc_red_lgN | Ribonucleotide reductase, all-alpha domain | 9.6E-24 | 142 | 212 |
| PF03477 | ATP-cone | ATP cone domain | 3.5E-16 | 1 | 89 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005524 | ATP binding | Yes |
| GO:0004748 | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | Yes |
| GO:0006260 | DNA replication | Yes |
| GO:0009987 | cellular process | No |
| GO:0035639 | purine ribonucleoside triphosphate binding | No |
| GO:0032553 | ribonucleotide binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0017076 | purine nucleotide binding | No |
| GO:0003674 | molecular_function | No |
| GO:0097367 | carbohydrate derivative binding | No |
| GO:0044238 | primary metabolic process | No |
| GO:0032555 | purine ribonucleotide binding | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0016728 | oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0043167 | ion binding | No |
| GO:0090304 | nucleic acid metabolic process | No |
| GO:0036094 | small molecule binding | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:0044260 | cellular macromolecule metabolic process | No |
| GO:0005488 | binding | No |
| GO:0032559 | adenyl ribonucleotide binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0000166 | nucleotide binding | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | No |
| GO:0043168 | anion binding | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0030554 | adenyl nucleotide binding | No |
| GO:0006259 | DNA metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0061731 | ribonucleoside-diphosphate reductase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 37 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g7077.t1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLAAETAAYMTVTHPDYA ILAARIAVSNLHKQTKKQFSLVISDLYHYVNPKNNQPAPMISKETYEIIMKHADELNSAIVYDRDFNYNFFGFKT LERSYLLRINGKVAERPQHLLMRVAVGIHGSDIEKAIETYHLMSQKYFTHASPTLFNAGTPQPQLASCFLVDMKE DSIDGIYDTLKTCAMISKTAGGIGLNVHRIRSTGSYIGGTNGTSNGLVPMLRVFNNTARYVDQGGNKRPGAFAIY LEPWHSDVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVEANGDWTLFCPNEAPGLADVYGDEFDALYEKYE KEGRGRRTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNLGTIRSSNLCTEIIEYSAPDEVAVCNLASLA LPTFVDAARGEYDFGKLHEVVQVLVRNLNKIIDINYYPVPEAKKSNFRHRPIALGVNGLADAFLALRLPFDSAEA RQLNIQIFETIYHAGLTASSDLAKEFGTYETYEGSPVSQGILQYDMWDRTPTDLWDWAALKAKIAQTGVRNSLLV APMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWLLKDLVDLGLWSDNMKNRIIAEGGSVQNIPNIPS DIKALYKTVWEISQRTILQMAADRGAFIDQSQSLNIHLKEPTMGKITSMHFAGWKMGLKTGMYYLRTMAASAPIQ FTVDQEQLKVEDTNVARTNAAYKKRAVGAASSTYSAVPRGQAPVNGHSENGVNGINGSNNGSPRALAADASSTQE NGPQEEDSQQESEERENDIYSQQVLQCSIENKEACIMCQG* |
| Coding | >Ani_SJS100_1|g7077.t1 ATGTTTGTCTACAAGAGAGACGGACGCAAAGAACGCGTGCAGTTCGACAAGATCACTGCCCGTGTGTCAAGGCTC TGTTACGGCCTTGACCCCGAGCATGTCGATGCTGCTGCTATCACCCAGAAGGTCATCTCTGGTGTCTACCAGGGT GTCACCACCGTTGAACTCGATAACCTGGCTGCTGAAACCGCTGCGTACATGACTGTCACACATCCCGACTACGCC ATCCTCGCTGCCCGTATCGCCGTTTCCAACCTCCACAAGCAGACCAAGAAGCAGTTCTCGTTGGTCATTTCAGAT CTCTACCACTATGTCAACCCCAAGAACAACCAACCTGCGCCAATGATATCAAAGGAGACATACGAAATAATCATG AAACACGCCGATGAGCTTAACTCGGCTATTGTATACGACCGTGATTTCAACTACAACTTCTTCGGCTTCAAGACC CTGGAGCGGTCATACCTGTTGCGGATCAACGGAAAGGTGGCTGAGCGTCCCCAGCACCTGCTGATGCGTGTTGCC GTTGGTATCCACGGTAGTGACATCGAGAAGGCCATCGAGACCTACCACTTGATGTCCCAGAAGTACTTCACTCAC GCCTCCCCGACTCTGTTCAACGCTGGTACTCCCCAGCCTCAGCTTGCCTCTTGCTTCCTCGTCGACATGAAGGAG GACAGCATTGACGGTATCTACGACACTTTGAAGACTTGCGCTATGATCTCCAAGACCGCCGGTGGTATTGGTCTG AACGTGCACCGCATCCGCTCTACCGGATCTTACATTGGTGGCACCAACGGTACCTCCAACGGTCTTGTTCCCATG CTTCGGGTTTTCAACAACACTGCCAGATACGTTGACCAGGGTGGCAACAAGCGTCCCGGTGCTTTTGCCATCTAC CTTGAGCCCTGGCACTCGGATGTCTTCGAGTTCCTGGACCTCCGTAAGAACCACGGTAAGGAGGAGGTCAGAGCC CGCGATCTGTTCTATGCCCTGTGGACTCCGGATCTGTTCATGAAGCGTGTTGAGGCGAACGGCGACTGGACTCTG TTCTGCCCCAACGAAGCCCCTGGCTTGGCTGATGTCTACGGTGACGAGTTCGACGCCCTCTACGAGAAGTACGAG AAGGAAGGCCGTGGCCGTCGTACCATCAAGGCTCAGAAGCTCTGGTACGCTATTCTGGAGGCTCAGACCGAGACT GGTAACCCCTTCATGCTGTACAAGGATGCTTGCAACAAGAAGAGCAACCAGAAGAACCTCGGAACCATCCGTAGC TCCAACCTCTGCACTGAGATCATTGAGTACAGTGCTCCGGATGAGGTTGCTGTCTGCAACCTTGCCTCTCTTGCC CTTCCTACTTTCGTCGATGCTGCTCGCGGCGAGTATGACTTTGGCAAGCTCCACGAGGTCGTCCAGGTCTTGGTC CGTAACTTGAACAAGATCATCGACATCAACTACTACCCCGTCCCGGAGGCCAAGAAGTCCAACTTCCGTCACCGT CCCATTGCGCTGGGTGTCAACGGTCTGGCTGATGCTTTCCTCGCTCTCCGCCTGCCCTTCGACTCGGCCGAGGCC AGACAGCTGAACATCCAGATCTTCGAGACCATCTATCACGCTGGTTTGACCGCCTCGTCCGATCTCGCCAAGGAG TTCGGAACTTACGAGACCTACGAGGGATCTCCTGTCTCCCAGGGTATCCTTCAGTACGACATGTGGGACCGCACT CCCACTGACCTCTGGGACTGGGCTGCTCTCAAGGCCAAGATCGCCCAGACTGGTGTCCGCAACAGCTTGCTGGTC GCCCCCATGCCCACTGCCAGTACCAGTCAGATCTTGGGCTTCAACGAGTGCTTCGAGCCTTACACCTCCAACATC TACTCCCGCCGTGTCTTGGCTGGTGAGTTCCAGGTGGTCAACCCCTGGCTGCTGAAGGACCTGGTCGATCTCGGC CTGTGGTCGGACAACATGAAGAACCGCATCATTGCCGAGGGTGGTTCCGTCCAGAACATCCCCAACATCCCCAGT GACATCAAGGCGCTGTACAAGACGGTGTGGGAGATCTCCCAGCGGACGATCCTGCAGATGGCAGCGGACCGTGGT GCGTTCATTGACCAGTCTCAGTCCCTCAACATCCACCTGAAGGAGCCCACCATGGGCAAGATCACCAGCATGCAC TTTGCCGGCTGGAAGATGGGTCTGAAGACGGGTATGTACTACCTGCGCACGATGGCCGCCTCTGCGCCCATCCAG TTCACCGTCGACCAGGAGCAGCTCAAGGTCGAGGATACCAATGTGGCCCGCACCAATGCCGCCTACAAGAAGCGG GCTGTTGGCGCGGCCTCCAGCACCTACTCTGCTGTTCCCCGCGGCCAGGCTCCGGTCAACGGACACAGCGAGAAC GGAGTCAACGGAATCAACGGCTCCAACAACGGCAGCCCTCGGGCTCTTGCTGCGGATGCCTCCTCCACTCAGGAG AACGGCCCCCAGGAGGAGGACAGCCAGCAGGAGAGCGAAGAGCGGGAGAACGACATCTACTCGCAGCAGGTGCTC CAGTGCAGCATTGAGAACAAGGAGGCGTGCATTATGTGCCAGGGTTAG |
| Transcript | >Ani_SJS100_1|g7077.t1 ATGTTTGTCTACAAGAGAGACGGACGCAAAGAACGCGTGCAGTTCGACAAGATCACTGCCCGTGTGTCAAGGCTC TGTTACGGCCTTGACCCCGAGCATGTCGATGCTGCTGCTATCACCCAGAAGGTCATCTCTGGTGTCTACCAGGGT GTCACCACCGTTGAACTCGATAACCTGGCTGCTGAAACCGCTGCGTACATGACTGTCACACATCCCGACTACGCC ATCCTCGCTGCCCGTATCGCCGTTTCCAACCTCCACAAGCAGACCAAGAAGCAGTTCTCGTTGGTCATTTCAGAT CTCTACCACTATGTCAACCCCAAGAACAACCAACCTGCGCCAATGATATCAAAGGAGACATACGAAATAATCATG AAACACGCCGATGAGCTTAACTCGGCTATTGTATACGACCGTGATTTCAACTACAACTTCTTCGGCTTCAAGACC CTGGAGCGGTCATACCTGTTGCGGATCAACGGAAAGGTGGCTGAGCGTCCCCAGCACCTGCTGATGCGTGTTGCC GTTGGTATCCACGGTAGTGACATCGAGAAGGCCATCGAGACCTACCACTTGATGTCCCAGAAGTACTTCACTCAC GCCTCCCCGACTCTGTTCAACGCTGGTACTCCCCAGCCTCAGCTTGCCTCTTGCTTCCTCGTCGACATGAAGGAG GACAGCATTGACGGTATCTACGACACTTTGAAGACTTGCGCTATGATCTCCAAGACCGCCGGTGGTATTGGTCTG AACGTGCACCGCATCCGCTCTACCGGATCTTACATTGGTGGCACCAACGGTACCTCCAACGGTCTTGTTCCCATG CTTCGGGTTTTCAACAACACTGCCAGATACGTTGACCAGGGTGGCAACAAGCGTCCCGGTGCTTTTGCCATCTAC CTTGAGCCCTGGCACTCGGATGTCTTCGAGTTCCTGGACCTCCGTAAGAACCACGGTAAGGAGGAGGTCAGAGCC CGCGATCTGTTCTATGCCCTGTGGACTCCGGATCTGTTCATGAAGCGTGTTGAGGCGAACGGCGACTGGACTCTG TTCTGCCCCAACGAAGCCCCTGGCTTGGCTGATGTCTACGGTGACGAGTTCGACGCCCTCTACGAGAAGTACGAG AAGGAAGGCCGTGGCCGTCGTACCATCAAGGCTCAGAAGCTCTGGTACGCTATTCTGGAGGCTCAGACCGAGACT GGTAACCCCTTCATGCTGTACAAGGATGCTTGCAACAAGAAGAGCAACCAGAAGAACCTCGGAACCATCCGTAGC TCCAACCTCTGCACTGAGATCATTGAGTACAGTGCTCCGGATGAGGTTGCTGTCTGCAACCTTGCCTCTCTTGCC CTTCCTACTTTCGTCGATGCTGCTCGCGGCGAGTATGACTTTGGCAAGCTCCACGAGGTCGTCCAGGTCTTGGTC CGTAACTTGAACAAGATCATCGACATCAACTACTACCCCGTCCCGGAGGCCAAGAAGTCCAACTTCCGTCACCGT CCCATTGCGCTGGGTGTCAACGGTCTGGCTGATGCTTTCCTCGCTCTCCGCCTGCCCTTCGACTCGGCCGAGGCC AGACAGCTGAACATCCAGATCTTCGAGACCATCTATCACGCTGGTTTGACCGCCTCGTCCGATCTCGCCAAGGAG TTCGGAACTTACGAGACCTACGAGGGATCTCCTGTCTCCCAGGGTATCCTTCAGTACGACATGTGGGACCGCACT CCCACTGACCTCTGGGACTGGGCTGCTCTCAAGGCCAAGATCGCCCAGACTGGTGTCCGCAACAGCTTGCTGGTC GCCCCCATGCCCACTGCCAGTACCAGTCAGATCTTGGGCTTCAACGAGTGCTTCGAGCCTTACACCTCCAACATC TACTCCCGCCGTGTCTTGGCTGGTGAGTTCCAGGTGGTCAACCCCTGGCTGCTGAAGGACCTGGTCGATCTCGGC CTGTGGTCGGACAACATGAAGAACCGCATCATTGCCGAGGGTGGTTCCGTCCAGAACATCCCCAACATCCCCAGT GACATCAAGGCGCTGTACAAGACGGTGTGGGAGATCTCCCAGCGGACGATCCTGCAGATGGCAGCGGACCGTGGT GCGTTCATTGACCAGTCTCAGTCCCTCAACATCCACCTGAAGGAGCCCACCATGGGCAAGATCACCAGCATGCAC TTTGCCGGCTGGAAGATGGGTCTGAAGACGGGTATGTACTACCTGCGCACGATGGCCGCCTCTGCGCCCATCCAG TTCACCGTCGACCAGGAGCAGCTCAAGGTCGAGGATACCAATGTGGCCCGCACCAATGCCGCCTACAAGAAGCGG GCTGTTGGCGCGGCCTCCAGCACCTACTCTGCTGTTCCCCGCGGCCAGGCTCCGGTCAACGGACACAGCGAGAAC GGAGTCAACGGAATCAACGGCTCCAACAACGGCAGCCCTCGGGCTCTTGCTGCGGATGCCTCCTCCACTCAGGAG AACGGCCCCCAGGAGGAGGACAGCCAGCAGGAGAGCGAAGAGCGGGAGAACGACATCTACTCGCAGCAGGTGCTC CAGTGCAGCATTGAGAACAAGGAGGCGTGCATTATGTGCCAGGGTTAG |
| Gene | >Ani_SJS100_1|g7077.t1 ATGTTTGTCTACAAGAGAGGTGAGTGCGAGTTGCATACATTCCCCTGTTCTGGATGGAATGAACGCCCGTCGATT GAGCAGAATGGACCTTGCCACCCCTGCAACTGTCAGTGCTGACTTTGAATCTAGACGGACGCAAAGAACGCGTGC AGTTCGACAAGATCACTGCCCGTGTGTCAAGGCTCTGTTACGGCCTTGACCCCGAGCATGTCGATGCTGCTGCTA TCACCCAGAAGGTCATCTCTGGTGTCTACCAGGGTGTCACCACCGTTGAACTCGATAACCTGGTAGGTTTGCAGC ACTTACGATAGACAGAGCAAGTGCTGATGTGTCGACCTAGGCTGCTGAAACCGCTGCGTACATGACTGTCACACA TCCCGACTACGCCATCCTCGCTGCCCGTATCGCCGTTTCCAACCTCCACAAGCAGACCAAGAAGCAGTTCTCGTT GGTCATTTCAGATCTCTACCACTATGTCAACCCCAAGAACAACCAACCTGCGCCAATGATATCAAAGGAGACATA CGAAATAATCATGAAACACGCCGATGAGCTTAACTCGGCTATTGTATACGACCGTGATTTCAACTACAACTTCTT CGGCTTCAAGACCCTGGAGCGGTCATACCTGTTGCGGATCAACGGAAAGGTGGCTGAGCGTCCCCAGCACCTGCT GATGCGTGTTGCCGTTGGTATCCACGGTAGTGACATCGAGAAGGCCATCGAGACCTACCACTTGATGTCCCAGAA GTACTTCACTCACGCCTCCCCGACTCTGTTCAACGCTGGTACTCCCCAGCCTCAGCTTGCCTCTTGCTTCCTCGT CGACATGAAGGAGGACAGCATTGACGGTATCTACGACACTTTGAAGACTTGCGCTATGATCTCCAAGACCGCCGG TGGTATTGGTCTGAACGTGCACCGCATCCGCTCTACCGGATCTTACATTGGTGGCACCAACGGTACCTCCAACGG TCTTGTTCCCATGCTTCGGGTTTTCAACAACACTGCCAGATACGTTGACCAGGGTGGCAACAAGCGTCCCGGTGC TTTTGCCATCTACCTTGAGCCCTGGCACTCGGATGTCTTCGAGTTCCTGGACCTCCGTAAGAACCACGGTAAGGA GGAGGTCAGAGCCCGCGATCTGTTCTATGCCCTGTGGACTCCGGATCTGTTCATGAAGCGTGTTGAGGCGAACGG CGACTGGACTCTGTTCTGCCCCAACGAAGCCCCTGGCTTGGCTGATGTCTACGGTGACGAGTTCGACGCCCTCTA CGAGAAGTAAGTTTGTTGGTTCGTGTATTCTCAACTCATGCTAATAGTATTGTAGGTACGAGAAGGAAGGCCGTG GCCGTCGTACCATCAAGGCTCAGAAGCTCTGGTACGCTATTCTGGAGGCTCAGACCGAGACTGGTAACCCCTTCA TGCTGTACAAGGATGCTTGCAACAAGAAGAGCAACCAGAAGAACCTCGGAACCATCCGTAGCTCCAACCTCTGCA CTGAGATCATTGAGTACAGTGCTCCGGATGAGGTTGCTGTCTGCAACCTTGCCTCTCTTGCCCTTCCTACTTTCG TCGATGCTGCTCGCGGCGAGTATGACTTTGGCAAGCTCCACGAGGTCGTCCAGGTCTTGGTCCGTAACTTGAACA AGATCATCGACATCAACTACTACCCCGTCCCGGAGGCCAAGAAGTCCAACTTCCGTCACCGTCCCATTGCGCTGG GTGTCAACGGTCTGGCTGATGCTTTCCTCGCTCTCCGCCTGCCCTTCGACTCGGCCGAGGCCAGACAGCTGAACA TCCAGATCTTCGAGACCATCTATCACGCTGGTTTGACCGCCTCGTCCGATCTCGCCAAGGAGTTCGGAACTTACG AGACCTACGAGGGATCTCCTGTCTCCCAGGGTATCCTTCAGTACGACATGTGGGACCGCACTCCCACTGACCTCT GGGACTGGGCTGCTCTCAAGGCCAAGATCGCCCAGACTGGTGTCCGCAACAGCTTGCTGGTCGCCCCCATGCCCA CTGCCAGTACCAGTCAGATCTTGGGCTTCAACGAGTGCTTCGAGCCTTACACCTCCAACATCTACTCCCGCCGTG TCTTGGCTGGTGAGTTCCAGGTGGTCAACCCCTGGCTGCTGAAGGACCTGGTCGATCTCGGCCTGTGGTCGGACA ACATGAAGAACCGCATCATTGCCGAGGGTGGTTCCGTCCAGAACATCCCCAACATCCCCAGTGACATCAAGGCGC TGTACAAGACGGTGTGGGAGATCTCCCAGCGGACGATCCTGCAGATGGCAGCGGACCGTGGTGCGTTCATTGACC AGTCTCAGTCCCTCAACATCCACCTGAAGGAGCCCACCATGGGCAAGATCACCAGCATGCACTTTGCCGGCTGGA AGATGGGTCTGAAGACGGGTATGTACTACCTGCGCACGATGGCCGCCTCTGCGCCCATCCAGTTCACCGTCGACC AGGAGCAGCTCAAGGTCGAGGATACCAATGTGGCCCGCACCAATGCCGCCTACAAGAAGCGGGCTGTTGGCGCGG CCTCCAGCACCTACTCTGCTGTTCCCCGCGGCCAGGCTCCGGTCAACGGACACAGCGAGAACGGAGTCAACGGAA TCAACGGCTCCAACAACGGCAGCCCTCGGGCTCTTGCTGCGGATGCCTCCTCCACTCAGGAGAACGGCCCCCAGG AGGAGGACAGCCAGCAGGAGAGCGAAGAGCGGGAGAACGACATCTACTCGCAGCAGGTGCTCCAGTGCAGCATTG AGAACAAGGAGGCGTGCATTATGTGCCAGGGTTAG |