© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g7052.t1 |
| Gene name | |
| Location | scaffold_047:116197..117623 |
| Strand | - |
| Gene length (bp) | 1426 |
| Transcript length (bp) | 1377 |
| Coding sequence length (bp) | 1377 |
| Protein length (aa) | 459 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00108 | Thiolase_N | Thiolase, N-terminal domain | 2.9E-17 | 12 | 231 |
| PF02803 | Thiolase_C | Thiolase, C-terminal domain | 2.2E-10 | 276 | 366 |
| PF08545 | ACP_syn_III | 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III | 9.9E-06 | 81 | 118 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004315 | 3-oxoacyl-[acyl-carrier-protein] synthase activity | Yes |
| GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | Yes |
| GO:0006633 | fatty acid biosynthetic process | Yes |
| GO:0044255 | cellular lipid metabolic process | No |
| GO:0046394 | carboxylic acid biosynthetic process | No |
| GO:0004312 | fatty acid synthase activity | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0044249 | cellular biosynthetic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0019752 | carboxylic acid metabolic process | No |
| GO:0008610 | lipid biosynthetic process | No |
| GO:0016740 | transferase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0072330 | monocarboxylic acid biosynthetic process | No |
| GO:0009987 | cellular process | No |
| GO:0006082 | organic acid metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0032787 | monocarboxylic acid metabolic process | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0044281 | small molecule metabolic process | No |
| GO:0009058 | biosynthetic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0016746 | acyltransferase activity | No |
| GO:0043436 | oxoacid metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0006629 | lipid metabolic process | No |
| GO:0044283 | small molecule biosynthetic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0016053 | organic acid biosynthetic process | No |
| GO:0006631 | fatty acid metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 13 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g7052.t1 MGKKPSGPAYVLGVGMTKFIKPRGKVDYHELGFEAGVKAMLDAHINYDDVEQGVACYVYGDSTCGQRVFYQFGLT QIPIYNVNNNCSTGSTGLAMARTMVSHGAADCVLVVGFEKMSPGSLQSVYNDRANPTGLFGTMMAETRGITNAPG AAQMFGNAGREYMEKYGAKTEDFAEIARINHEHSKRNPYSQFQDEYTLEQILKAPKIHEPLTKLQCCPTSDGAAA AVIVSQAFLDARPHLKDQAILIAGQQLASDNSSLYNRSSIDLMGFGMSRGACRAATAEAGVNVKDIKVCELHDCF SANEMITIDALELSEPGKAHEMVRKGDITYGGKMVINPSGGLISKGHPLGATGLAQCAELVWHLRGWANNRLVQG TDAALQHNLGLGGAVVVTVYKRADGKVATPVPSDVVAKISGLGYNPAVEAKGFTAEQAKSVQSKNHSDTWALGDT QERVLARF* |
| Coding | >Ani_SJS100_1|g7052.t1 ATGGGGAAGAAACCATCTGGTCCTGCCTACGTCCTGGGCGTGGGAATGACCAAATTCATCAAGCCACGCGGCAAG GTCGATTACCACGAGCTTGGCTTTGAAGCCGGTGTCAAGGCCATGCTGGATGCTCACATCAACTACGACGACGTC GAGCAAGGTGTCGCCTGCTACGTATACGGTGACAGCACATGCGGTCAGCGTGTGTTCTATCAGTTCGGTCTGACC CAGATCCCCATCTACAATGTCAACAACAACTGCTCCACCGGATCCACTGGCCTCGCCATGGCCCGCACCATGGTC TCTCATGGAGCTGCCGATTGTGTTCTGGTTGTCGGTTTCGAGAAGATGAGCCCTGGAAGTCTGCAGTCAGTCTAT AATGACCGCGCGAATCCCACCGGCTTGTTCGGTACCATGATGGCCGAGACTAGAGGAATCACCAATGCTCCTGGT GCTGCACAAATGTTTGGCAATGCTGGTCGCGAATACATGGAGAAATACGGCGCCAAGACAGAGGACTTTGCCGAG ATTGCTCGCATCAACCACGAGCACTCGAAGCGCAACCCATACTCTCAGTTCCAGGATGAATACACACTCGAGCAG ATTCTCAAGGCGCCCAAGATCCACGAACCTCTCACGAAGCTGCAGTGTTGCCCGACCTCGGACGGAGCTGCCGCC GCCGTCATTGTTTCTCAGGCGTTCCTCGACGCCCGCCCGCATCTCAAGGACCAGGCCATCCTCATCGCGGGTCAG CAGCTCGCTTCGGACAACAGCTCGCTCTACAACCGCAGCTCCATCGACTTGATGGGCTTCGGTATGTCCCGGGGG GCATGCCGCGCCGCGACCGCAGAGGCGGGCGTCAACGTAAAGGACATCAAGGTGTGCGAGCTGCACGACTGTTTC TCCGCCAACGAGATGATCACCATCGATGCCCTAGAGCTTTCCGAACCTGGAAAGGCCCACGAGATGGTCCGAAAG GGGGACATCACTTACGGAGGCAAGATGGTCATCAACCCGTCAGGCGGTCTCATCTCCAAGGGTCACCCGCTGGGT GCCACGGGTCTGGCGCAATGTGCAGAGCTGGTCTGGCACTTGCGCGGCTGGGCCAACAACCGCCTGGTCCAAGGA ACTGATGCCGCACTCCAGCACAACCTGGGCTTGGGTGGTGCGGTTGTAGTGACAGTGTACAAACGCGCAGATGGC AAGGTTGCTACACCTGTGCCATCCGATGTCGTTGCTAAGATCTCCGGGCTTGGCTATAATCCGGCCGTGGAGGCC AAGGGCTTCACAGCGGAACAGGCCAAATCCGTGCAGAGCAAGAACCACAGCGATACGTGGGCATTGGGCGACACG CAGGAGAGGGTTCTGGCACGTTTCTAA |
| Transcript | >Ani_SJS100_1|g7052.t1 ATGGGGAAGAAACCATCTGGTCCTGCCTACGTCCTGGGCGTGGGAATGACCAAATTCATCAAGCCACGCGGCAAG GTCGATTACCACGAGCTTGGCTTTGAAGCCGGTGTCAAGGCCATGCTGGATGCTCACATCAACTACGACGACGTC GAGCAAGGTGTCGCCTGCTACGTATACGGTGACAGCACATGCGGTCAGCGTGTGTTCTATCAGTTCGGTCTGACC CAGATCCCCATCTACAATGTCAACAACAACTGCTCCACCGGATCCACTGGCCTCGCCATGGCCCGCACCATGGTC TCTCATGGAGCTGCCGATTGTGTTCTGGTTGTCGGTTTCGAGAAGATGAGCCCTGGAAGTCTGCAGTCAGTCTAT AATGACCGCGCGAATCCCACCGGCTTGTTCGGTACCATGATGGCCGAGACTAGAGGAATCACCAATGCTCCTGGT GCTGCACAAATGTTTGGCAATGCTGGTCGCGAATACATGGAGAAATACGGCGCCAAGACAGAGGACTTTGCCGAG ATTGCTCGCATCAACCACGAGCACTCGAAGCGCAACCCATACTCTCAGTTCCAGGATGAATACACACTCGAGCAG ATTCTCAAGGCGCCCAAGATCCACGAACCTCTCACGAAGCTGCAGTGTTGCCCGACCTCGGACGGAGCTGCCGCC GCCGTCATTGTTTCTCAGGCGTTCCTCGACGCCCGCCCGCATCTCAAGGACCAGGCCATCCTCATCGCGGGTCAG CAGCTCGCTTCGGACAACAGCTCGCTCTACAACCGCAGCTCCATCGACTTGATGGGCTTCGGTATGTCCCGGGGG GCATGCCGCGCCGCGACCGCAGAGGCGGGCGTCAACGTAAAGGACATCAAGGTGTGCGAGCTGCACGACTGTTTC TCCGCCAACGAGATGATCACCATCGATGCCCTAGAGCTTTCCGAACCTGGAAAGGCCCACGAGATGGTCCGAAAG GGGGACATCACTTACGGAGGCAAGATGGTCATCAACCCGTCAGGCGGTCTCATCTCCAAGGGTCACCCGCTGGGT GCCACGGGTCTGGCGCAATGTGCAGAGCTGGTCTGGCACTTGCGCGGCTGGGCCAACAACCGCCTGGTCCAAGGA ACTGATGCCGCACTCCAGCACAACCTGGGCTTGGGTGGTGCGGTTGTAGTGACAGTGTACAAACGCGCAGATGGC AAGGTTGCTACACCTGTGCCATCCGATGTCGTTGCTAAGATCTCCGGGCTTGGCTATAATCCGGCCGTGGAGGCC AAGGGCTTCACAGCGGAACAGGCCAAATCCGTGCAGAGCAAGAACCACAGCGATACGTGGGCATTGGGCGACACG CAGGAGAGGGTTCTGGCACGTTTCTAA |
| Gene | >Ani_SJS100_1|g7052.t1 ATGGGGAAGAAACCATCTGGTCCTGCCTACGTCCTGGGCGTGGGAATGACCAAATTCATCAAGCCACGCGGCAAG GTCGATTACCACGAGCTTGGCTTTGAAGCCGGTGTCAAGGCCATGCTGGATGCTCACATCAACTACGACGACGTC GAGCAAGGTGTCGCCTGCTACGTATACGGTGACAGCACATGCGGTCAGCGTGTGTTCTATCAGTTCGGTCTGACC CAGATCCCCATCTACAATGTCAACAACAACTGCTCCACCGGATCCACTGGCCTCGCCATGGCCCGCACCATGGTC TCTCATGGAGCTGCCGATTGTGTTCTGGTTGTCGGTTTCGAGAAGATGAGCCCTGGAAGTCTGCAGTCAGTCTAT AATGACCGCGCGAATCCCACCGGCTTGTTCGGTACCATGATGGCCGAGACTAGAGGAATCACCAATGCTCCTGGT GCTGCACAAATGTTTGGCAATGCTGGTCGCGAATACATGGAGAAGTAAGTCCAAGGCCCTACGCTGTCATCCATA TGTATTAACAAAGACTAGATACGGCGCCAAGACAGAGGACTTTGCCGAGATTGCTCGCATCAACCACGAGCACTC GAAGCGCAACCCATACTCTCAGTTCCAGGATGAATACACACTCGAGCAGATTCTCAAGGCGCCCAAGATCCACGA ACCTCTCACGAAGCTGCAGTGTTGCCCGACCTCGGACGGAGCTGCCGCCGCCGTCATTGTTTCTCAGGCGTTCCT CGACGCCCGCCCGCATCTCAAGGACCAGGCCATCCTCATCGCGGGTCAGCAGCTCGCTTCGGACAACAGCTCGCT CTACAACCGCAGCTCCATCGACTTGATGGGCTTCGGTATGTCCCGGGGGGCATGCCGCGCCGCGACCGCAGAGGC GGGCGTCAACGTAAAGGACATCAAGGTGTGCGAGCTGCACGACTGTTTCTCCGCCAACGAGATGATCACCATCGA TGCCCTAGAGCTTTCCGAACCTGGAAAGGCCCACGAGATGGTCCGAAAGGGGGACATCACTTACGGAGGCAAGAT GGTCATCAACCCGTCAGGCGGTCTCATCTCCAAGGGTCACCCGCTGGGTGCCACGGGTCTGGCGCAATGTGCAGA GCTGGTCTGGCACTTGCGCGGCTGGGCCAACAACCGCCTGGTCCAAGGAACTGATGCCGCACTCCAGCACAACCT GGGCTTGGGTGGTGCGGTTGTAGTGACAGTGTACAAACGCGCAGATGGCAAGGTTGCTACACCTGTGCCATCCGA TGTCGTTGCTAAGATCTCCGGGCTTGGCTATAATCCGGCCGTGGAGGCCAAGGGCTTCACAGCGGAACAGGCCAA ATCCGTGCAGAGCAAGAACCACAGCGATACGTGGGCATTGGGCGACACGCAGGAGAGGGTTCTGGCACGTTTCTA A |