© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g7012.t1 |
| Gene name | |
| Location | scaffold_046:234341..235526 |
| Strand | + |
| Gene length (bp) | 1185 |
| Transcript length (bp) | 1008 |
| Coding sequence length (bp) | 1008 |
| Protein length (aa) | 336 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00153 | Mito_carr | Mitochondrial carrier protein | 1.6E-20 | 9 | 108 |
| PF00153 | Mito_carr | Mitochondrial carrier protein | 7.4E-14 | 118 | 203 |
| PF00153 | Mito_carr | Mitochondrial carrier protein | 2.3E-16 | 208 | 298 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 28 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 10 | 32 | 22 |
| 2 | 77 | 99 | 22 |
| 3 | 119 | 141 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g7012.t1 MAGQSKPALSPWGSAVAGATGAVLANALVYPLDLVKTKLQVQVKTNDAKDENSETVHYKSTLDAITKIVEKEGVE GLYSGIVGSLIGVASTNFAYFYWYTVVRAFYMASNKVPKPPGTAIELSLGAVAGAVAQIFTIPVAVITTRQQTQA KNERKGLIETGKEIVDSEDGWTGLWRGLKASLILVVNPAITYGAYQRLKDIIFPGKNSLKPWEAFLLGALSKALA TIATQPLIVAKVGLQSRPPPSREGKPFKTFGEVMRYIVQNEGLLSLFKGIGPQIMKGLLVQGLLMMTKERVELIF VLLFAYLRKIREQKLKKLADSAASTAKTSLPATLK* |
| Coding | >Ani_SJS100_1|g7012.t1 ATGGCAGGCCAGTCGAAGCCCGCACTTTCCCCTTGGGGAAGTGCCGTTGCAGGTGCTACAGGTGCGGTTCTAGCG AACGCTTTGGTCTACCCTCTCGATCTAGTCAAGACGAAGCTTCAAGTACAAGTTAAGACAAACGACGCGAAAGAC GAGAACTCCGAAACAGTTCACTATAAATCGACATTAGATGCGATCACCAAGATTGTCGAAAAGGAAGGAGTCGAA GGCCTATACTCCGGAATCGTTGGCTCACTCATCGGTGTGGCGTCCACCAACTTCGCCTACTTCTACTGGTACACC GTTGTGAGGGCCTTCTATATGGCATCTAACAAGGTCCCTAAACCTCCTGGAACTGCCATTGAGCTTTCCCTCGGT GCCGTGGCGGGCGCGGTCGCCCAGATCTTCACTATTCCCGTCGCCGTAATCACCACACGGCAGCAGACACAAGCC AAAAACGAGAGGAAGGGTTTGATTGAAACTGGAAAGGAGATTGTCGATAGTGAAGATGGTTGGACCGGTCTATGG AGAGGACTCAAAGCTAGTTTGATCCTGGTGGTCAACCCTGCAATCACATACGGCGCCTATCAGCGCCTCAAAGAT ATCATCTTCCCAGGCAAGAACAGTCTGAAGCCTTGGGAGGCTTTCCTCCTCGGCGCTCTCTCCAAGGCGCTAGCT ACTATCGCGACGCAGCCATTGATCGTGGCTAAGGTCGGCCTCCAGTCCCGCCCACCTCCGAGCCGCGAAGGAAAG CCTTTCAAGACATTCGGCGAAGTTATGCGCTATATTGTGCAGAACGAGGGTCTCCTGTCCCTATTCAAGGGAATT GGACCCCAGATCATGAAGGGACTCCTTGTGCAAGGCCTTTTGATGATGACTAAGGAGAGGGTTGAACTCATCTTC GTTCTTCTTTTCGCATACCTGCGCAAGATTAGAGAGCAGAAGCTCAAGAAGCTGGCGGACTCTGCTGCATCGACA GCGAAGACCAGTCTTCCGGCGACCCTCAAATAG |
| Transcript | >Ani_SJS100_1|g7012.t1 ATGGCAGGCCAGTCGAAGCCCGCACTTTCCCCTTGGGGAAGTGCCGTTGCAGGTGCTACAGGTGCGGTTCTAGCG AACGCTTTGGTCTACCCTCTCGATCTAGTCAAGACGAAGCTTCAAGTACAAGTTAAGACAAACGACGCGAAAGAC GAGAACTCCGAAACAGTTCACTATAAATCGACATTAGATGCGATCACCAAGATTGTCGAAAAGGAAGGAGTCGAA GGCCTATACTCCGGAATCGTTGGCTCACTCATCGGTGTGGCGTCCACCAACTTCGCCTACTTCTACTGGTACACC GTTGTGAGGGCCTTCTATATGGCATCTAACAAGGTCCCTAAACCTCCTGGAACTGCCATTGAGCTTTCCCTCGGT GCCGTGGCGGGCGCGGTCGCCCAGATCTTCACTATTCCCGTCGCCGTAATCACCACACGGCAGCAGACACAAGCC AAAAACGAGAGGAAGGGTTTGATTGAAACTGGAAAGGAGATTGTCGATAGTGAAGATGGTTGGACCGGTCTATGG AGAGGACTCAAAGCTAGTTTGATCCTGGTGGTCAACCCTGCAATCACATACGGCGCCTATCAGCGCCTCAAAGAT ATCATCTTCCCAGGCAAGAACAGTCTGAAGCCTTGGGAGGCTTTCCTCCTCGGCGCTCTCTCCAAGGCGCTAGCT ACTATCGCGACGCAGCCATTGATCGTGGCTAAGGTCGGCCTCCAGTCCCGCCCACCTCCGAGCCGCGAAGGAAAG CCTTTCAAGACATTCGGCGAAGTTATGCGCTATATTGTGCAGAACGAGGGTCTCCTGTCCCTATTCAAGGGAATT GGACCCCAGATCATGAAGGGACTCCTTGTGCAAGGCCTTTTGATGATGACTAAGGAGAGGGTTGAACTCATCTTC GTTCTTCTTTTCGCATACCTGCGCAAGATTAGAGAGCAGAAGCTCAAGAAGCTGGCGGACTCTGCTGCATCGACA GCGAAGACCAGTCTTCCGGCGACCCTCAAATAG |
| Gene | >Ani_SJS100_1|g7012.t1 ATGGCAGGCCAGTCGAAGCCCGCACTTTCCCCTTGGGGAAGTGCCGTTGCAGGTGCTACAGGTGCGGTTCTAGCG AACGCTTTGGTCTACCCTCTCGATCTGTATGCAAGTGCCTGTTGTCGCTTTAGAACTGGAAACAAAGAATATGCT AATAACCATGCGTCAATCCACAGAGTCAAGACGAAGCTTCAAGTACAAGTTAAGACAAACGACGCGAAAGACGAG AACTCCGAAACAGTTCACTATAAATCGACATTAGATGCGATCACCAAGATTGTCGAAAAGGAAGGAGTCGAAGGC CTATACTCCGGAATCGTTGGCTCACTCATCGGTGTGGCGTCCACCAACTTCGCCTACTTCTACTGGTACACCGTT GTGAGGGCCTTCTATATGGCATCTAACAAGGTCCCTAAACCTCCTGGAACTGCCATTGAGCTTTCCCTCGGTGCC GTGGCGGGCGCGGTCGCCCAGATCTTCACTATTCCCGTCGCCGTAATCACCACACGGCAGCAGACACAAGCCAAA AACGAGAGGAAGGGTTTGATTGAAACTGGAAAGGAGATTGTCGATAGTGAAGATGGTTGGACCGGTCTATGGAGA GGACTCAAAGCTAGTTTGATCCTGGTGGTCAACCCTGCAATCACATACGGCGCCTATCAGCGCCTCAAAGATATC ATCTTCCCAGGCAAGAACAGTCTGAAGCCTTGGGAGGCTTTCCGTAAGTAACCCTATTACCGTCCATATCTTACG AGCCAAACCAATGACTTTTGCAGTCCTCGGCGCTCTCTCCAAGGCGCTAGCTACTATCGCGACGCAGCCATTGAT CGTGGCTAAGGTCGGCCTCCAGTCCCGCCCACCTCCGAGCCGCGAAGGAAAGCCTTTCAAGACATTCGGCGAAGT TATGCGCTATATTGTGCAGAACGAGGGTCTCCTGTCCCTATTCAAGGGAATTGGACCCCAGATCATGAAGGGACT CCTTGTGCAAGGCCTTTTGATGATGACTAAGGAGAGGTATGTTTGGTCTTGATTAAGGGGCGCAATCACATGCTG ACAGCGACCAGGGTTGAACTCATCTTCGTTCTTCTTTTCGCATACCTGCGCAAGATTAGAGAGCAGAAGCTCAAG AAGCTGGCGGACTCTGCTGCATCGACAGCGAAGACCAGTCTTCCGGCGACCCTCAAATAG |