Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g7012.t1
Gene name
Locationscaffold_046:234341..235526
Strand+
Gene length (bp)1185
Transcript length (bp)1008
Coding sequence length (bp)1008
Protein length (aa) 336

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00153 Mito_carr Mitochondrial carrier protein 1.6E-20 9 108
PF00153 Mito_carr Mitochondrial carrier protein 7.4E-14 118 203
PF00153 Mito_carr Mitochondrial carrier protein 2.3E-16 208 298

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 28 0.5

Transmembrane Domains

Domain # Start End Length
1 10 32 22
2 77 99 22
3 119 141 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g7012.t1
MAGQSKPALSPWGSAVAGATGAVLANALVYPLDLVKTKLQVQVKTNDAKDENSETVHYKSTLDAITKIVEKEGVE
GLYSGIVGSLIGVASTNFAYFYWYTVVRAFYMASNKVPKPPGTAIELSLGAVAGAVAQIFTIPVAVITTRQQTQA
KNERKGLIETGKEIVDSEDGWTGLWRGLKASLILVVNPAITYGAYQRLKDIIFPGKNSLKPWEAFLLGALSKALA
TIATQPLIVAKVGLQSRPPPSREGKPFKTFGEVMRYIVQNEGLLSLFKGIGPQIMKGLLVQGLLMMTKERVELIF
VLLFAYLRKIREQKLKKLADSAASTAKTSLPATLK*
Coding >Ani_SJS100_1|g7012.t1
ATGGCAGGCCAGTCGAAGCCCGCACTTTCCCCTTGGGGAAGTGCCGTTGCAGGTGCTACAGGTGCGGTTCTAGCG
AACGCTTTGGTCTACCCTCTCGATCTAGTCAAGACGAAGCTTCAAGTACAAGTTAAGACAAACGACGCGAAAGAC
GAGAACTCCGAAACAGTTCACTATAAATCGACATTAGATGCGATCACCAAGATTGTCGAAAAGGAAGGAGTCGAA
GGCCTATACTCCGGAATCGTTGGCTCACTCATCGGTGTGGCGTCCACCAACTTCGCCTACTTCTACTGGTACACC
GTTGTGAGGGCCTTCTATATGGCATCTAACAAGGTCCCTAAACCTCCTGGAACTGCCATTGAGCTTTCCCTCGGT
GCCGTGGCGGGCGCGGTCGCCCAGATCTTCACTATTCCCGTCGCCGTAATCACCACACGGCAGCAGACACAAGCC
AAAAACGAGAGGAAGGGTTTGATTGAAACTGGAAAGGAGATTGTCGATAGTGAAGATGGTTGGACCGGTCTATGG
AGAGGACTCAAAGCTAGTTTGATCCTGGTGGTCAACCCTGCAATCACATACGGCGCCTATCAGCGCCTCAAAGAT
ATCATCTTCCCAGGCAAGAACAGTCTGAAGCCTTGGGAGGCTTTCCTCCTCGGCGCTCTCTCCAAGGCGCTAGCT
ACTATCGCGACGCAGCCATTGATCGTGGCTAAGGTCGGCCTCCAGTCCCGCCCACCTCCGAGCCGCGAAGGAAAG
CCTTTCAAGACATTCGGCGAAGTTATGCGCTATATTGTGCAGAACGAGGGTCTCCTGTCCCTATTCAAGGGAATT
GGACCCCAGATCATGAAGGGACTCCTTGTGCAAGGCCTTTTGATGATGACTAAGGAGAGGGTTGAACTCATCTTC
GTTCTTCTTTTCGCATACCTGCGCAAGATTAGAGAGCAGAAGCTCAAGAAGCTGGCGGACTCTGCTGCATCGACA
GCGAAGACCAGTCTTCCGGCGACCCTCAAATAG
Transcript >Ani_SJS100_1|g7012.t1
ATGGCAGGCCAGTCGAAGCCCGCACTTTCCCCTTGGGGAAGTGCCGTTGCAGGTGCTACAGGTGCGGTTCTAGCG
AACGCTTTGGTCTACCCTCTCGATCTAGTCAAGACGAAGCTTCAAGTACAAGTTAAGACAAACGACGCGAAAGAC
GAGAACTCCGAAACAGTTCACTATAAATCGACATTAGATGCGATCACCAAGATTGTCGAAAAGGAAGGAGTCGAA
GGCCTATACTCCGGAATCGTTGGCTCACTCATCGGTGTGGCGTCCACCAACTTCGCCTACTTCTACTGGTACACC
GTTGTGAGGGCCTTCTATATGGCATCTAACAAGGTCCCTAAACCTCCTGGAACTGCCATTGAGCTTTCCCTCGGT
GCCGTGGCGGGCGCGGTCGCCCAGATCTTCACTATTCCCGTCGCCGTAATCACCACACGGCAGCAGACACAAGCC
AAAAACGAGAGGAAGGGTTTGATTGAAACTGGAAAGGAGATTGTCGATAGTGAAGATGGTTGGACCGGTCTATGG
AGAGGACTCAAAGCTAGTTTGATCCTGGTGGTCAACCCTGCAATCACATACGGCGCCTATCAGCGCCTCAAAGAT
ATCATCTTCCCAGGCAAGAACAGTCTGAAGCCTTGGGAGGCTTTCCTCCTCGGCGCTCTCTCCAAGGCGCTAGCT
ACTATCGCGACGCAGCCATTGATCGTGGCTAAGGTCGGCCTCCAGTCCCGCCCACCTCCGAGCCGCGAAGGAAAG
CCTTTCAAGACATTCGGCGAAGTTATGCGCTATATTGTGCAGAACGAGGGTCTCCTGTCCCTATTCAAGGGAATT
GGACCCCAGATCATGAAGGGACTCCTTGTGCAAGGCCTTTTGATGATGACTAAGGAGAGGGTTGAACTCATCTTC
GTTCTTCTTTTCGCATACCTGCGCAAGATTAGAGAGCAGAAGCTCAAGAAGCTGGCGGACTCTGCTGCATCGACA
GCGAAGACCAGTCTTCCGGCGACCCTCAAATAG
Gene >Ani_SJS100_1|g7012.t1
ATGGCAGGCCAGTCGAAGCCCGCACTTTCCCCTTGGGGAAGTGCCGTTGCAGGTGCTACAGGTGCGGTTCTAGCG
AACGCTTTGGTCTACCCTCTCGATCTGTATGCAAGTGCCTGTTGTCGCTTTAGAACTGGAAACAAAGAATATGCT
AATAACCATGCGTCAATCCACAGAGTCAAGACGAAGCTTCAAGTACAAGTTAAGACAAACGACGCGAAAGACGAG
AACTCCGAAACAGTTCACTATAAATCGACATTAGATGCGATCACCAAGATTGTCGAAAAGGAAGGAGTCGAAGGC
CTATACTCCGGAATCGTTGGCTCACTCATCGGTGTGGCGTCCACCAACTTCGCCTACTTCTACTGGTACACCGTT
GTGAGGGCCTTCTATATGGCATCTAACAAGGTCCCTAAACCTCCTGGAACTGCCATTGAGCTTTCCCTCGGTGCC
GTGGCGGGCGCGGTCGCCCAGATCTTCACTATTCCCGTCGCCGTAATCACCACACGGCAGCAGACACAAGCCAAA
AACGAGAGGAAGGGTTTGATTGAAACTGGAAAGGAGATTGTCGATAGTGAAGATGGTTGGACCGGTCTATGGAGA
GGACTCAAAGCTAGTTTGATCCTGGTGGTCAACCCTGCAATCACATACGGCGCCTATCAGCGCCTCAAAGATATC
ATCTTCCCAGGCAAGAACAGTCTGAAGCCTTGGGAGGCTTTCCGTAAGTAACCCTATTACCGTCCATATCTTACG
AGCCAAACCAATGACTTTTGCAGTCCTCGGCGCTCTCTCCAAGGCGCTAGCTACTATCGCGACGCAGCCATTGAT
CGTGGCTAAGGTCGGCCTCCAGTCCCGCCCACCTCCGAGCCGCGAAGGAAAGCCTTTCAAGACATTCGGCGAAGT
TATGCGCTATATTGTGCAGAACGAGGGTCTCCTGTCCCTATTCAAGGGAATTGGACCCCAGATCATGAAGGGACT
CCTTGTGCAAGGCCTTTTGATGATGACTAAGGAGAGGTATGTTTGGTCTTGATTAAGGGGCGCAATCACATGCTG
ACAGCGACCAGGGTTGAACTCATCTTCGTTCTTCTTTTCGCATACCTGCGCAAGATTAGAGAGCAGAAGCTCAAG
AAGCTGGCGGACTCTGCTGCATCGACAGCGAAGACCAGTCTTCCGGCGACCCTCAAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail