Protein ID | Ani_SJS100_1|g7010.t1 |
Gene name | |
Location | scaffold_046:228840..230303 |
Strand | - |
Gene length (bp) | 1463 |
Transcript length (bp) | 1257 |
Coding sequence length (bp) | 1257 |
Protein length (aa) | 419 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04652 | Vta1 | Vta1 like | 3.4E-50 | 14 | 157 |
PF18097 | Vta1_C | Vta1 C-terminal domain | 4.4E-16 | 380 | 416 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 46 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g7010.t1 MASNIPASLRSADIGRYALRAAQLERAKPVVAYWCNFWIVNQIIGRGLHTSDDDVKQYTTDLVDKLEQFKSENVD NDAVTDAVAANAYVEQFGLEVLGRAEATMKANKVTKQTADTFQAAATFLELCQIWTNPPEPEIAAKIKFCKYHAV RIIKAIKAGEDPNASNPAPTEEDELESELRGMEAKQDDPEVQAIVGSSAAPPGQPSVEEVPDESTQPSQSPLSLP QPPTTFADAPAAHYGADPMSTSNMEDDAETGAPLNLPSAPETFTSPAPSVPNLPDTPADIGAKPPQARADSFHSF PPPSSIPPSSPSAASHDASSFYTRPTSGVAPPPPFVQSSSATAPVVSRPTPQSIPSSTPPPPAPAASSSSGVNAQ SLDDQAIALAQKHARWAVSALTFDDVNTAIKELKNSLRYLGAE* |
Coding | >Ani_SJS100_1|g7010.t1 ATGGCGAGCAATATCCCCGCTAGCTTGAGATCCGCAGACATTGGGCGATACGCGTTGCGGGCAGCTCAGCTCGAA CGCGCGAAGCCCGTTGTCGCCTACTGGTGTAACTTCTGGATTGTTAATCAGATTATCGGACGGGGACTGCACACT TCTGACGACGATGTCAAGCAATACACAACGGACCTGGTGGACAAGTTGGAGCAGTTCAAGAGTGAGAATGTCGAT AATGATGCGGTAACCGATGCGGTGGCAGCCAATGCCTACGTGGAGCAGTTCGGATTGGAGGTCCTTGGCCGTGCG GAGGCGACTATGAAGGCCAATAAAGTGACCAAACAGACGGCCGACACATTCCAAGCCGCTGCTACGTTTCTCGAA TTGTGTCAGATTTGGACCAACCCTCCGGAACCTGAGATCGCCGCGAAGATCAAGTTTTGCAAGTACCATGCCGTG AGGATCATAAAGGCTATCAAGGCGGGAGAGGATCCTAATGCGTCCAACCCGGCACCTACTGAAGAAGATGAACTC GAAAGTGAACTTAGGGGTATGGAGGCAAAGCAGGACGATCCCGAAGTGCAGGCCATCGTGGGATCGTCAGCCGCA CCACCTGGGCAGCCTTCTGTTGAAGAGGTCCCTGATGAGTCTACACAACCCTCACAATCACCCCTTAGTCTCCCG CAACCTCCGACCACGTTTGCCGATGCTCCAGCTGCTCACTACGGTGCAGACCCCATGTCTACTTCGAACATGGAG GACGATGCGGAGACAGGCGCACCGCTGAACCTTCCCTCGGCTCCAGAGACTTTCACTTCACCTGCTCCCTCCGTG CCCAACCTCCCAGATACGCCCGCGGATATTGGTGCAAAACCTCCGCAAGCTCGTGCTGACTCGTTCCACTCTTTC CCTCCCCCGTCATCCATTCCGCCTTCGAGCCCGTCGGCAGCATCTCACGATGCAAGCTCGTTCTACACCAGACCG ACAAGCGGTGTCGCTCCGCCTCCACCGTTTGTACAGTCTTCCTCTGCGACAGCACCTGTAGTTTCTCGCCCTACT CCTCAAAGTATCCCGTCATCCACACCACCTCCACCTGCACCTGCCGCTTCTAGTTCCAGTGGGGTGAACGCTCAG TCACTTGACGATCAAGCTATAGCTCTTGCTCAGAAGCATGCCCGCTGGGCCGTGTCAGCCTTGACATTCGACGAC GTCAACACCGCGATTAAAGAGCTGAAGAATTCACTGCGTTATCTCGGTGCAGAGTGA |
Transcript | >Ani_SJS100_1|g7010.t1 ATGGCGAGCAATATCCCCGCTAGCTTGAGATCCGCAGACATTGGGCGATACGCGTTGCGGGCAGCTCAGCTCGAA CGCGCGAAGCCCGTTGTCGCCTACTGGTGTAACTTCTGGATTGTTAATCAGATTATCGGACGGGGACTGCACACT TCTGACGACGATGTCAAGCAATACACAACGGACCTGGTGGACAAGTTGGAGCAGTTCAAGAGTGAGAATGTCGAT AATGATGCGGTAACCGATGCGGTGGCAGCCAATGCCTACGTGGAGCAGTTCGGATTGGAGGTCCTTGGCCGTGCG GAGGCGACTATGAAGGCCAATAAAGTGACCAAACAGACGGCCGACACATTCCAAGCCGCTGCTACGTTTCTCGAA TTGTGTCAGATTTGGACCAACCCTCCGGAACCTGAGATCGCCGCGAAGATCAAGTTTTGCAAGTACCATGCCGTG AGGATCATAAAGGCTATCAAGGCGGGAGAGGATCCTAATGCGTCCAACCCGGCACCTACTGAAGAAGATGAACTC GAAAGTGAACTTAGGGGTATGGAGGCAAAGCAGGACGATCCCGAAGTGCAGGCCATCGTGGGATCGTCAGCCGCA CCACCTGGGCAGCCTTCTGTTGAAGAGGTCCCTGATGAGTCTACACAACCCTCACAATCACCCCTTAGTCTCCCG CAACCTCCGACCACGTTTGCCGATGCTCCAGCTGCTCACTACGGTGCAGACCCCATGTCTACTTCGAACATGGAG GACGATGCGGAGACAGGCGCACCGCTGAACCTTCCCTCGGCTCCAGAGACTTTCACTTCACCTGCTCCCTCCGTG CCCAACCTCCCAGATACGCCCGCGGATATTGGTGCAAAACCTCCGCAAGCTCGTGCTGACTCGTTCCACTCTTTC CCTCCCCCGTCATCCATTCCGCCTTCGAGCCCGTCGGCAGCATCTCACGATGCAAGCTCGTTCTACACCAGACCG ACAAGCGGTGTCGCTCCGCCTCCACCGTTTGTACAGTCTTCCTCTGCGACAGCACCTGTAGTTTCTCGCCCTACT CCTCAAAGTATCCCGTCATCCACACCACCTCCACCTGCACCTGCCGCTTCTAGTTCCAGTGGGGTGAACGCTCAG TCACTTGACGATCAAGCTATAGCTCTTGCTCAGAAGCATGCCCGCTGGGCCGTGTCAGCCTTGACATTCGACGAC GTCAACACCGCGATTAAAGAGCTGAAGAATTCACTGCGTTATCTCGGTGCAGAGTGA |
Gene | >Ani_SJS100_1|g7010.t1 ATGGCGAGCAATATCCCCGCTAGCTTGAGATCCGCAGACATTGGGCGATACGCGTTGCGGGCAGCTCAGCTCGAA CGCGCGAAGCCCGTTGTCGCCTACTGGTGTAAGTGCTGTTGATTGCGCATGCTGCTGCTCAAACAGAAGCCACAT GAACTGACTAACGGTTGCTTCTCAATTACAGGTAACTTCTGGATTGTTAATCAGATTATCGGACGGGGACTGCAC ACTTCTGACGACGATGTCAAGCAATACACAACGGACCTGGTGGACAAGTTGGAGCAGGTACGTCGGGCGCACGAC ACCCCCGCTGCGATGGCGCGCAGTCCCTGGAGACTTACACCTCTTCTCTCTGAGTTCAGTTCAAGAGTGAGAATG TCGATAATGATGCGGTAACCGATGCGGTGGCAGCCAATGCCTACGTGGAGCAGTTCGGATTGGAGGTCCTTGGCC GTGCGGAGGCGACTATGAAGGCCAATAAAGTGACCAAGTGGGTTGTTTTCGTGGGAGACTATCCGCACCACCGCT GACCCGTAATTAGACAGACGGCCGACACATTCCAAGCCGCTGCTACGTTTCTCGAATTGTGTCAGATTTGGACCA ACCCTCCGGAACCTGAGATCGCCGCGAAGATCAAGTTTTGCAAGTACCATGCCGTGAGGATCATAAAGGCTATCA AGGCGGGAGAGGATCCTAATGCGTCCAACCCGGCACCTACTGAAGAAGATGAACTCGAAAGTGAACTTAGGGGTA TGGAGGCAAAGCAGGACGATCCCGAAGTGCAGGCCATCGTGGGATCGTCAGCCGCACCACCTGGGCAGCCTTCTG TTGAAGAGGTCCCTGATGAGTCTACACAACCCTCACAATCACCCCTTAGTCTCCCGCAACCTCCGACCACGTTTG CCGATGCTCCAGCTGCTCACTACGGTGCAGACCCCATGTCTACTTCGAACATGGAGGACGATGCGGAGACAGGCG CACCGCTGAACCTTCCCTCGGCTCCAGAGACTTTCACTTCACCTGCTCCCTCCGTGCCCAACCTCCCAGATACGC CCGCGGATATTGGTGCAAAACCTCCGCAAGCTCGTGCTGACTCGTTCCACTCTTTCCCTCCCCCGTCATCCATTC CGCCTTCGAGCCCGTCGGCAGCATCTCACGATGCAAGCTCGTTCTACACCAGACCGACAAGCGGTGTCGCTCCGC CTCCACCGTTTGTACAGTCTTCCTCTGCGACAGCACCTGTAGTTTCTCGCCCTACTCCTCAAAGTATCCCGTCAT CCACACCACCTCCACCTGCACCTGCCGCTTCTAGTTCCAGTGGGGTGAACGCTCAGTCACTTGACGATCAAGCTA TAGCTCTTGCTCAGAAGCATGCCCGCTGGGCCGTGTCAGCCTTGACATTCGACGACGTCAACACCGCGATTAAAG AGCTGAAGAATTCACTGCGTTATCTCGGTGCAGAGTGA |