Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g6959.t1
Gene name
Locationscaffold_046:32436..33020
Strand-
Gene length (bp)584
Transcript length (bp)384
Coding sequence length (bp)384
Protein length (aa) 128

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03911 Sec61_beta Sec61beta family 2.1E-17 79 119

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 55 0.45

Transmembrane Domains

Domain # Start End Length
1 96 118 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g6959.t1
MASPRAASPMTSGAESGPDSKSAGAGTGASAVSSVNRPSSPTPPGGPRAAMRRRAAADHKESLRNARPSSTRAAG
AGGSSGTMLKLYTDESPGLRVDPVVVLVLSLGFIFSVVGLHVIAKITRKFSS*
Coding >Ani_SJS100_1|g6959.t1
ATGGCCTCTCCCCGTGCTGCTTCCCCCATGACCTCCGGTGCTGAGTCCGGTCCCGACTCCAAGTCTGCTGGCGCT
GGCACCGGCGCCTCTGCTGTCTCCTCCGTCAACCGCCCTTCCTCTCCTACTCCTCCTGGTGGTCCCCGGGCTGCT
ATGCGTCGCCGCGCGGCCGCTGACCACAAGGAGTCCCTCCGCAATGCCAGACCCAGCTCGACTCGCGCCGCCGGT
GCTGGTGGCTCCTCCGGCACGATGCTCAAGCTCTACACTGACGAGAGCCCCGGTCTGAGGGTTGACCCCGTTGTT
GTCCTGGTTCTCAGTCTGGGCTTCATTTTCTCCGTCGTTGGTCTCCACGTCATTGCCAAGATCACCCGCAAGTTC
TCCTCATAA
Transcript >Ani_SJS100_1|g6959.t1
ATGGCCTCTCCCCGTGCTGCTTCCCCCATGACCTCCGGTGCTGAGTCCGGTCCCGACTCCAAGTCTGCTGGCGCT
GGCACCGGCGCCTCTGCTGTCTCCTCCGTCAACCGCCCTTCCTCTCCTACTCCTCCTGGTGGTCCCCGGGCTGCT
ATGCGTCGCCGCGCGGCCGCTGACCACAAGGAGTCCCTCCGCAATGCCAGACCCAGCTCGACTCGCGCCGCCGGT
GCTGGTGGCTCCTCCGGCACGATGCTCAAGCTCTACACTGACGAGAGCCCCGGTCTGAGGGTTGACCCCGTTGTT
GTCCTGGTTCTCAGTCTGGGCTTCATTTTCTCCGTCGTTGGTCTCCACGTCATTGCCAAGATCACCCGCAAGTTC
TCCTCATAA
Gene >Ani_SJS100_1|g6959.t1
ATGGTGAGCACCCTTGTCCTGCCGATCCTCTTGGTGGCTACCGTTGTCTCCCAAGCGAACTCAACCAGACCATCG
ACGAATTGTGACAACTTCAGTCAATTAGACTAAGGGCAACCTCATCTAACGTCTGTATTCTCTTCAGGCCTCTCC
CCGTGCTGCTTCCCCCATGACCTCCGGTGCTGAGTCCGGTCCCGACTCCAAGTCTGCTGGCGCTGGCACCGGCGC
CTCTGCTGTCTCCTCCGTCAACCGCCCTTCCTCTCCTACTCCTCCTGGTGGTCCCCGGGCTGCTATGCGTCGCCG
CGCGGCCGCTGACCACAAGGAGTCCCTCCGCAATGCCAGACCCAGCTCGACTCGCGCCGCCGGTGCTGGTGGCTC
CTCCGGCACGATGCTCAAGCTCTACACTGACGAGAGCCCCGGTCTGAGGGTTGACCCCGTTGTTGTCCTGGTTCT
CAGTCTGGGCTTCATTTTCTCCGTCGTTGGTCTCCACGGTAAGTGTGCTTTCCGGGTTGTCTTCTGGGTGGTGAA
GTGGCCTCTAACGCGCATATCCAGTCATTGCCAAGATCACCCGCAAGTTCTCCTCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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