© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g6913.t1 |
| Gene name | |
| Location | scaffold_045:179490..181333 |
| Strand | + |
| Gene length (bp) | 1843 |
| Transcript length (bp) | 1749 |
| Coding sequence length (bp) | 1749 |
| Protein length (aa) | 583 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00860 | Xan_ur_permease | Permease family | 7.9E-65 | 73 | 496 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 16 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 70 | 92 | 22 |
| 2 | 107 | 129 | 22 |
| 3 | 136 | 158 | 22 |
| 4 | 183 | 205 | 22 |
| 5 | 212 | 234 | 22 |
| 6 | 262 | 284 | 22 |
| 7 | 297 | 319 | 22 |
| 8 | 334 | 353 | 19 |
| 9 | 424 | 446 | 22 |
| 10 | 450 | 469 | 19 |
| 11 | 481 | 500 | 19 |
| 12 | 520 | 542 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g6913.t1 MDGPDQIGPDYRPKRTWGDVGRRFVKTFTTREGLIGDYDYAYLFTPNIPFITKKRSSAPFFGLEDKVPIVLALLL GLQHALAMLGGIISPPILIGGTSGANFGTEDYQYLVSTSLIASGILSAIQMFRFHIYGTKYYIGTGLTSVVGISF ATITVATGGFEQMYSSGYCPTAEDGTKLPCPKGYGALLGTSCLCALLEIGLSFMSPKILRRVFPPLVTGPTVLLI GASLIESAFQDWAGGSGTCSENPGNGALCPSADAPHALPWGSAEFIGLGFLVYVSIILCERFGAPIMRSCSVVVG LLVGCIVAAACGYFDRSGIDAAPVASFIWVKTFPLTIYPPMILPLLAVYIVVMMESIGDITATCDVSQVEVEGPT FDSRIQGGVLGNGLTSVLAGLMTMTPMSVFAQNNGVIALTKCANRTAGYCCCFFLIIMGIFAKFAAALVAIPSSV LGGMTTFLFSSVAISGVRIITNVPFTRRNRFILTASFAVGMGATLVSDWFDYVFTYSGNNRGLTGLLDAIDLVME NGFAITALIGLILNLILPEDPEEEAAILEARGVYRRSEEVMTSRESTQYTKGEPSSV* |
| Coding | >Ani_SJS100_1|g6913.t1 ATGGACGGTCCTGACCAGATAGGCCCGGACTACCGGCCTAAGCGGACTTGGGGTGACGTAGGTCGCCGCTTTGTC AAAACCTTCACCACAAGGGAGGGTCTCATTGGAGACTATGATTATGCCTATTTGTTCACTCCGAACATCCCCTTC ATCACAAAGAAACGAAGTTCTGCACCGTTCTTCGGGCTCGAAGACAAGGTACCTATTGTACTAGCTCTACTGCTT GGACTGCAACATGCATTGGCGATGCTGGGTGGAATTATTTCACCTCCTATCCTGATCGGGGGCACATCTGGTGCC AACTTCGGGACAGAAGACTACCAATACCTCGTCTCAACATCTCTCATCGCTTCCGGTATCTTGTCCGCCATTCAG ATGTTCCGCTTCCACATCTACGGAACGAAATACTACATCGGTACCGGCTTGACTTCAGTCGTGGGAATTTCCTTC GCCACAATCACCGTCGCTACTGGTGGCTTCGAACAAATGTACTCTAGTGGATACTGCCCGACCGCCGAGGATGGA ACCAAGCTGCCCTGCCCCAAGGGCTATGGCGCCCTGCTGGGGACTTCGTGTTTGTGTGCGCTGCTCGAGATTGGT CTTTCCTTCATGAGCCCTAAAATCCTGAGACGCGTCTTCCCCCCCCTCGTCACTGGTCCTACTGTTCTCTTGATC GGAGCCAGTCTGATCGAGTCCGCTTTCCAGGACTGGGCAGGTGGTTCGGGAACCTGCTCTGAGAATCCTGGCAAC GGTGCTTTGTGCCCTAGCGCGGACGCACCGCATGCTCTGCCTTGGGGAAGTGCGGAGTTTATCGGTCTCGGATTT CTGGTGTATGTCTCGATCATTCTCTGTGAGCGGTTTGGAGCGCCTATCATGCGATCATGCTCGGTCGTGGTGGGA TTGTTGGTAGGATGTATTGTGGCGGCTGCCTGCGGATACTTTGATCGATCGGGAATTGACGCTGCGCCGGTGGCC TCCTTTATCTGGGTGAAGACTTTCCCGTTGACCATCTACCCGCCCATGATCCTTCCACTGCTGGCAGTGTACATT GTGGTCATGATGGAATCGATCGGTGACATTACCGCCACGTGCGATGTATCGCAGGTCGAAGTTGAAGGGCCCACT TTCGACTCGCGCATTCAGGGTGGTGTGCTGGGCAACGGTCTCACTAGTGTACTGGCCGGCCTCATGACCATGACG CCGATGTCGGTTTTTGCCCAGAACAACGGTGTCATCGCGCTGACCAAGTGCGCCAACCGCACGGCTGGTTACTGC TGCTGCTTCTTCCTCATCATTATGGGAATTTTTGCCAAGTTTGCCGCTGCACTGGTTGCCATTCCCAGTAGTGTT CTTGGTGGTATGACCACGTTCCTTTTCTCATCGGTGGCTATCTCTGGTGTCCGCATTATCACCAATGTGCCATTC ACGCGTCGCAACCGATTCATCCTGACCGCTTCGTTTGCAGTCGGCATGGGAGCCACCTTGGTATCCGACTGGTTC GACTACGTCTTTACCTACAGCGGTAACAACCGTGGTTTGACAGGATTGCTCGACGCGATTGATCTCGTGATGGAG AACGGGTTCGCCATTACCGCTCTAATCGGGTTAATCCTGAATCTGATCCTTCCGGAGGACCCAGAGGAGGAAGCG GCTATCCTGGAGGCACGGGGTGTTTACCGACGAAGCGAGGAGGTGATGACATCGAGGGAGAGCACGCAGTACACC AAGGGCGAGCCCTCGAGTGTTTAA |
| Transcript | >Ani_SJS100_1|g6913.t1 ATGGACGGTCCTGACCAGATAGGCCCGGACTACCGGCCTAAGCGGACTTGGGGTGACGTAGGTCGCCGCTTTGTC AAAACCTTCACCACAAGGGAGGGTCTCATTGGAGACTATGATTATGCCTATTTGTTCACTCCGAACATCCCCTTC ATCACAAAGAAACGAAGTTCTGCACCGTTCTTCGGGCTCGAAGACAAGGTACCTATTGTACTAGCTCTACTGCTT GGACTGCAACATGCATTGGCGATGCTGGGTGGAATTATTTCACCTCCTATCCTGATCGGGGGCACATCTGGTGCC AACTTCGGGACAGAAGACTACCAATACCTCGTCTCAACATCTCTCATCGCTTCCGGTATCTTGTCCGCCATTCAG ATGTTCCGCTTCCACATCTACGGAACGAAATACTACATCGGTACCGGCTTGACTTCAGTCGTGGGAATTTCCTTC GCCACAATCACCGTCGCTACTGGTGGCTTCGAACAAATGTACTCTAGTGGATACTGCCCGACCGCCGAGGATGGA ACCAAGCTGCCCTGCCCCAAGGGCTATGGCGCCCTGCTGGGGACTTCGTGTTTGTGTGCGCTGCTCGAGATTGGT CTTTCCTTCATGAGCCCTAAAATCCTGAGACGCGTCTTCCCCCCCCTCGTCACTGGTCCTACTGTTCTCTTGATC GGAGCCAGTCTGATCGAGTCCGCTTTCCAGGACTGGGCAGGTGGTTCGGGAACCTGCTCTGAGAATCCTGGCAAC GGTGCTTTGTGCCCTAGCGCGGACGCACCGCATGCTCTGCCTTGGGGAAGTGCGGAGTTTATCGGTCTCGGATTT CTGGTGTATGTCTCGATCATTCTCTGTGAGCGGTTTGGAGCGCCTATCATGCGATCATGCTCGGTCGTGGTGGGA TTGTTGGTAGGATGTATTGTGGCGGCTGCCTGCGGATACTTTGATCGATCGGGAATTGACGCTGCGCCGGTGGCC TCCTTTATCTGGGTGAAGACTTTCCCGTTGACCATCTACCCGCCCATGATCCTTCCACTGCTGGCAGTGTACATT GTGGTCATGATGGAATCGATCGGTGACATTACCGCCACGTGCGATGTATCGCAGGTCGAAGTTGAAGGGCCCACT TTCGACTCGCGCATTCAGGGTGGTGTGCTGGGCAACGGTCTCACTAGTGTACTGGCCGGCCTCATGACCATGACG CCGATGTCGGTTTTTGCCCAGAACAACGGTGTCATCGCGCTGACCAAGTGCGCCAACCGCACGGCTGGTTACTGC TGCTGCTTCTTCCTCATCATTATGGGAATTTTTGCCAAGTTTGCCGCTGCACTGGTTGCCATTCCCAGTAGTGTT CTTGGTGGTATGACCACGTTCCTTTTCTCATCGGTGGCTATCTCTGGTGTCCGCATTATCACCAATGTGCCATTC ACGCGTCGCAACCGATTCATCCTGACCGCTTCGTTTGCAGTCGGCATGGGAGCCACCTTGGTATCCGACTGGTTC GACTACGTCTTTACCTACAGCGGTAACAACCGTGGTTTGACAGGATTGCTCGACGCGATTGATCTCGTGATGGAG AACGGGTTCGCCATTACCGCTCTAATCGGGTTAATCCTGAATCTGATCCTTCCGGAGGACCCAGAGGAGGAAGCG GCTATCCTGGAGGCACGGGGTGTTTACCGACGAAGCGAGGAGGTGATGACATCGAGGGAGAGCACGCAGTACACC AAGGGCGAGCCCTCGAGTGTTTAA |
| Gene | >Ani_SJS100_1|g6913.t1 ATGGACGGTCCTGACCAGATAGGCCCGGACTACCGGCCTAAGCGGACTTGGGGTGACGTAGGTCGCCGCTTTGTC AAAACCTTCACCACAAGGTCGGTCATGGAAGCTCGGAACACCAGTCGATGTGCTAATATTCCGTAGGGAGGGTCT CATTGGAGACTATGATTATGCCTATTTGTTCACTCCGAACATCCCCTTCATCACAAAGAAACGAAGTTCTGCACC GTTCTTCGGGCTCGAAGACAAGGTACCTATTGTACTAGCTCTACTGCTTGGACTGCAACATGCATTGGCGATGCT GGGTGGAAGTAAGTTCAGTCCTCTCTGAAACCTGACTAGTGCTGACCCGTCAGTTATTTCACCTCCTATCCTGAT CGGGGGCACATCTGGTGCCAACTTCGGGACAGAAGACTACCAATACCTCGTCTCAACATCTCTCATCGCTTCCGG TATCTTGTCCGCCATTCAGATGTTCCGCTTCCACATCTACGGAACGAAATACTACATCGGTACCGGCTTGACTTC AGTCGTGGGAATTTCCTTCGCCACAATCACCGTCGCTACTGGTGGCTTCGAACAAATGTACTCTAGTGGATACTG CCCGACCGCCGAGGATGGAACCAAGCTGCCCTGCCCCAAGGGCTATGGCGCCCTGCTGGGGACTTCGTGTTTGTG TGCGCTGCTCGAGATTGGTCTTTCCTTCATGAGCCCTAAAATCCTGAGACGCGTCTTCCCCCCCCTCGTCACTGG TCCTACTGTTCTCTTGATCGGAGCCAGTCTGATCGAGTCCGCTTTCCAGGACTGGGCAGGTGGTTCGGGAACCTG CTCTGAGAATCCTGGCAACGGTGCTTTGTGCCCTAGCGCGGACGCACCGCATGCTCTGCCTTGGGGAAGTGCGGA GTTTATCGGTCTCGGATTTCTGGTGTATGTCTCGATCATTCTCTGTGAGCGGTTTGGAGCGCCTATCATGCGATC ATGCTCGGTCGTGGTGGGATTGTTGGTAGGATGTATTGTGGCGGCTGCCTGCGGATACTTTGATCGATCGGGAAT TGACGCTGCGCCGGTGGCCTCCTTTATCTGGGTGAAGACTTTCCCGTTGACCATCTACCCGCCCATGATCCTTCC ACTGCTGGCAGTGTACATTGTGGTCATGATGGAATCGATCGGTGACATTACCGCCACGTGCGATGTATCGCAGGT CGAAGTTGAAGGGCCCACTTTCGACTCGCGCATTCAGGGTGGTGTGCTGGGCAACGGTCTCACTAGTGTACTGGC CGGCCTCATGACCATGACGCCGATGTCGGTTTTTGCCCAGAACAACGGTGTCATCGCGCTGACCAAGTGCGCCAA CCGCACGGCTGGTTACTGCTGCTGCTTCTTCCTCATCATTATGGGAATTTTTGCCAAGTTTGCCGCTGCACTGGT TGCCATTCCCAGTAGTGTTCTTGGTGGTATGACCACGTTCCTTTTCTCATCGGTGGCTATCTCTGGTGTCCGCAT TATCACCAATGTGCCATTCACGCGTCGCAACCGATTCATCCTGACCGCTTCGTTTGCAGTCGGCATGGGAGCCAC CTTGGTATCCGACTGGTTCGACTACGTCTTTACCTACAGCGGTAACAACCGTGGTTTGACAGGATTGCTCGACGC GATTGATCTCGTGATGGAGAACGGGTTCGCCATTACCGCTCTAATCGGGTTAATCCTGAATCTGATCCTTCCGGA GGACCCAGAGGAGGAAGCGGCTATCCTGGAGGCACGGGGTGTTTACCGACGAAGCGAGGAGGTGATGACATCGAG GGAGAGCACGCAGTACACCAAGGGCGAGCCCTCGAGTGTTTAA |