Protein ID | Ani_SJS100_1|g691.t1 |
Gene name | |
Location | scaffold_002:752766..754152 |
Strand | + |
Gene length (bp) | 1386 |
Transcript length (bp) | 1332 |
Coding sequence length (bp) | 1332 |
Protein length (aa) | 444 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01490 | Aa_trans | Transmembrane amino acid transporter protein | 5.9E-50 | 30 | 425 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 44 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 55 | 77 | 22 |
2 | 109 | 131 | 22 |
3 | 141 | 163 | 22 |
4 | 168 | 190 | 22 |
5 | 210 | 232 | 22 |
6 | 253 | 275 | 22 |
7 | 290 | 312 | 22 |
8 | 340 | 362 | 22 |
9 | 367 | 389 | 22 |
10 | 402 | 424 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g691.t1 MASEGLPKSPDLSDPETQYILEGNARFRRLGWKRLTVISIVEAIALGSLGLPSAFATLGMVAGVILTIGIGLVAM YAGYNIGQVKLKYPEVGHYADVGQLLLGNIGGKIFVGSFVALLVFVIGSHCLTGAIAFQTITESSVCSVVFSVVS AAILMILAIPPSFAEIAILGYIDFASIILAIGITMIATGIQSSNSSGTFSADHIPWSAWPMAGITFSQAIVATNN IVFAYSFAGCLPSFMEDMHTPEDYVKTLWWLGGIQIVIYTLTGSLIYAFVGQGVESPALLSAGPVISRVVFGIAL PVIFISGSINVTVVCRYIHGKFYHDSAARFINTRKGWMTWLALISLITALAWVIAEAIPIFSELLSIISALFVSG LSFYIPPVMWFVLLRDGAWYEKHNLKPAICNLVVFIVGVIVFGCGTYSSIAELVNEFRSGEISKPFTC* |
Coding | >Ani_SJS100_1|g691.t1 ATGGCCAGTGAAGGCCTTCCCAAGAGTCCGGATCTGTCCGATCCCGAGACTCAGTACATCTTGGAGGGCAACGCC AGATTTCGCCGGCTAGGATGGAAACGCCTCACAGTTATTTCCATAGTGGAGGCCATTGCTCTTGGGAGCTTGGGC TTGCCTTCTGCCTTCGCTACTCTGGGCATGGTTGCCGGTGTCATCCTCACGATCGGTATCGGACTGGTAGCCATG TACGCGGGCTATAACATTGGACAAGTGAAGTTGAAGTACCCTGAGGTTGGGCACTACGCGGATGTCGGTCAGCTT TTACTGGGAAATATCGGAGGCAAAATATTCGTGGGCAGTTTTGTCGCCCTACTGGTCTTTGTTATCGGGTCTCAC TGCTTGACGGGCGCAATTGCATTCCAGACCATCACCGAAAGCAGCGTGTGTTCGGTGGTTTTCAGTGTTGTCTCC GCTGCCATTCTGATGATCCTTGCCATTCCTCCGTCCTTTGCCGAAATTGCCATTCTTGGTTATATCGATTTTGCT TCAATTATCTTGGCAATCGGTATCACTATGATTGCTACAGGCATTCAAAGCTCCAATTCCAGTGGTACCTTCTCC GCCGATCATATCCCGTGGTCGGCATGGCCCATGGCTGGGATCACATTCTCGCAGGCGATTGTGGCCACCAATAAT ATTGTCTTTGCTTATTCTTTCGCTGGCTGCCTGCCTTCGTTCATGGAAGATATGCATACCCCGGAGGACTACGTC AAAACCCTTTGGTGGCTAGGCGGCATTCAGATCGTCATATATACCTTGACGGGATCGCTTATCTACGCATTCGTG GGCCAAGGGGTAGAATCACCCGCGCTGCTATCAGCCGGACCAGTCATTTCAAGAGTGGTTTTCGGCATAGCCCTG CCAGTTATCTTCATCTCCGGCTCCATCAACGTGACAGTCGTCTGCCGATACATTCACGGCAAGTTCTACCATGAC TCGGCCGCCCGCTTCATCAACACCCGTAAAGGCTGGATGACTTGGTTGGCTCTTATATCCCTCATTACTGCTCTC GCTTGGGTCATTGCAGAGGCTATTCCGATTTTCTCGGAGCTGCTTTCCATCATCTCGGCGCTTTTTGTGTCCGGT CTGTCGTTTTACATTCCTCCGGTGATGTGGTTTGTGCTGTTGAGGGATGGGGCTTGGTACGAGAAACACAACCTA AAGCCTGCGATCTGTAACCTGGTGGTCTTTATTGTCGGTGTGATTGTTTTCGGTTGCGGTACTTATTCTAGTATT GCAGAGCTGGTTAATGAGTTTCGGTCGGGGGAGATAAGTAAACCTTTCACGTGCTAG |
Transcript | >Ani_SJS100_1|g691.t1 ATGGCCAGTGAAGGCCTTCCCAAGAGTCCGGATCTGTCCGATCCCGAGACTCAGTACATCTTGGAGGGCAACGCC AGATTTCGCCGGCTAGGATGGAAACGCCTCACAGTTATTTCCATAGTGGAGGCCATTGCTCTTGGGAGCTTGGGC TTGCCTTCTGCCTTCGCTACTCTGGGCATGGTTGCCGGTGTCATCCTCACGATCGGTATCGGACTGGTAGCCATG TACGCGGGCTATAACATTGGACAAGTGAAGTTGAAGTACCCTGAGGTTGGGCACTACGCGGATGTCGGTCAGCTT TTACTGGGAAATATCGGAGGCAAAATATTCGTGGGCAGTTTTGTCGCCCTACTGGTCTTTGTTATCGGGTCTCAC TGCTTGACGGGCGCAATTGCATTCCAGACCATCACCGAAAGCAGCGTGTGTTCGGTGGTTTTCAGTGTTGTCTCC GCTGCCATTCTGATGATCCTTGCCATTCCTCCGTCCTTTGCCGAAATTGCCATTCTTGGTTATATCGATTTTGCT TCAATTATCTTGGCAATCGGTATCACTATGATTGCTACAGGCATTCAAAGCTCCAATTCCAGTGGTACCTTCTCC GCCGATCATATCCCGTGGTCGGCATGGCCCATGGCTGGGATCACATTCTCGCAGGCGATTGTGGCCACCAATAAT ATTGTCTTTGCTTATTCTTTCGCTGGCTGCCTGCCTTCGTTCATGGAAGATATGCATACCCCGGAGGACTACGTC AAAACCCTTTGGTGGCTAGGCGGCATTCAGATCGTCATATATACCTTGACGGGATCGCTTATCTACGCATTCGTG GGCCAAGGGGTAGAATCACCCGCGCTGCTATCAGCCGGACCAGTCATTTCAAGAGTGGTTTTCGGCATAGCCCTG CCAGTTATCTTCATCTCCGGCTCCATCAACGTGACAGTCGTCTGCCGATACATTCACGGCAAGTTCTACCATGAC TCGGCCGCCCGCTTCATCAACACCCGTAAAGGCTGGATGACTTGGTTGGCTCTTATATCCCTCATTACTGCTCTC GCTTGGGTCATTGCAGAGGCTATTCCGATTTTCTCGGAGCTGCTTTCCATCATCTCGGCGCTTTTTGTGTCCGGT CTGTCGTTTTACATTCCTCCGGTGATGTGGTTTGTGCTGTTGAGGGATGGGGCTTGGTACGAGAAACACAACCTA AAGCCTGCGATCTGTAACCTGGTGGTCTTTATTGTCGGTGTGATTGTTTTCGGTTGCGGTACTTATTCTAGTATT GCAGAGCTGGTTAATGAGTTTCGGTCGGGGGAGATAAGTAAACCTTTCACGTGCTAG |
Gene | >Ani_SJS100_1|g691.t1 ATGGCCAGTGAAGGCCTTCCCAAGAGTCCGGATCTGTCCGATCCCGAGACTCAGTACATCTTGGAGGGCAACGCC AGATTTCGCCGGCTAGGATGGAAACGCCTCACAGTTATTTCCATAGTGGAGGCCATTGCTCTTGGGAGCTTGGGC TTGCCTTCTGCCTTCGCTACTCTGGGCATGGTTGCCGGTGTCATCCTCACGATCGGTATCGGACTGGTAGCCATG TACGCGGGCTATAACATTGGACAAGTGAAGTTGAAGTACCCTGAGGTTGGGCACTACGCGGATGTCGGTCAGCTT TTACTGGGAAATATCGGAGGCAAAATATTCGTGGGCAGTTTTGTCGCCCTACTGGTCTTTGTTATCGGGTCTCAC TGCTTGACGGGCGCAATTGCATTCCAGACCATCACCGAAAGCAGCGTGTGTTCGGTGGTTTTCAGTGTTGTCTCC GCTGCCATTCTGATGATCCTTGCCATTCCTCCGTCCTTTGCCGAAATTGCCATTCTTGGTTATATCGATTTTGCT TCAATTATCTTGGCAATCGGTATCACTATGATTGCTACAGGCATTCAAAGCTCCAATTCCAGTGGTACCTTCTCC GCCGATCATATCCCGTGGTCGGCATGGCCCATGGCTGGGATCACATTCTCGCAGGCGATTGTGGCCACCAATAAT ATTGTCTTTGCTTATTCTTTCGCTGGCTGCCTGCCTTCGTTCATGGAAGATATGCATACCCCGGAGGACTACGTC AAAACCCTTTGGTGGCTAGGCGGCATTCAGATCGTCATATATACCTTGACGGGATCGCTTATCTACGCATTCGTG GGCCAAGGGGTAGAATCACCCGCGCTGCTATCAGCCGGACCAGTCATTTCAAGAGTGGTTTTCGGCATAGCCCTG CCAGTTATCTTCATCTCCGGCTCCATCAACGTGACAGTCGTCTGCCGATACATTCACGGCAAGTTCTACCATGAC TCGGCCGCCCGCTTCATCAACACCCGTAAAGGCTGGATGACTTGGTTGGCTCTTATATCCCTCATTACTGCTCTC GCTTGGGTCATTGCAGAGGCTATTCCGATTTTCTCGGAGCTGCTTTCCATCATCTCGGCGCTTTTTGTGTCCGGT CTGTCGTTTTACATTCCTCCGGTGATGTGGTTTGTGCTGTTGAGGGATGGGGCTTGGTACGAGAAACACAACCTA AAGCCTGCGATCTGTAACCTGGTGGTCTTTATTGTCGGTGTGATTGTTTTCGGTTGCGGTACTTATTCTAGTATT GCAGAGCTGGTAGGTGGTTTCCCTGCGGACATGGAAAATCTCATGCTAACGTGATAATCATAGGTTAATGAGTTT CGGTCGGGGGAGATAAGTAAACCTTTCACGTGCTAG |