© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g6904.t1 |
| Gene name | |
| Location | scaffold_045:147479..149588 |
| Strand | - |
| Gene length (bp) | 2109 |
| Transcript length (bp) | 1941 |
| Coding sequence length (bp) | 1941 |
| Protein length (aa) | 647 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 7.1E-85 | 135 | 596 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.7E-10 | 136 | 334 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 37 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 173 | 195 | 22 |
| 2 | 205 | 227 | 22 |
| 3 | 269 | 286 | 17 |
| 4 | 301 | 320 | 19 |
| 5 | 387 | 409 | 22 |
| 6 | 432 | 454 | 22 |
| 7 | 461 | 483 | 22 |
| 8 | 488 | 510 | 22 |
| 9 | 531 | 553 | 22 |
| 10 | 563 | 580 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g6904.t1 MFGKEECPVIGEPIFENKPSNDEYVSDHRETIRLQRSFGTAAERARRNMNAKLANPLAGYTQEELRQQGINFAIT HQMGDEEDVRAFAMGAMLAQVPERYAEVPGLTPQELAVLENEYAHRWSQPWTMYPVICLCSLSAAVQGMDETVVN GAQIFYKHQFGIDRGSESRSNWLLGLVNCAPYMCCALVGCWLTVPFNAWFGRRGTIFITCCFSAITCLWQGFVNT WWHMFIARFALGFGIGPKSATVPIYAAETAPPVIRGALVMQWQMWTAFGIMFGYVADLAFFEIQDPAGIVGLNWR LMMASALFPALLVCCFVFTCPESPRWYMSRNRYDKAYESMCSLRFNKVQAARDLYYMHTLLQAETGMKLGQNKLI ELIAVPRNRRALIASELVMFMQQFCGVNVIAYYSSEIFLGTTGNSLTQLSVSNQRKALAASFGWGMINWLFAIPA VYTIDTFGRRNLLLTTFPLMALSMFFTGFSFWIPEDTHSSARLGCIALGTYLFAIVYSVGEGPVPFTYSAEAYPL YVRSHGMALATATTWLFNCLLAITWPSLRAAFTPQGAFSWYAGWCIVGWWLILMFMPETKGKTLEELDQVFSVPT RFHAAYGLRQIPYFFRRYILRQKVRPEILYERDDEVPMTEAGYNTA* |
| Coding | >Ani_SJS100_1|g6904.t1 ATGTTTGGAAAAGAAGAATGCCCGGTCATCGGGGAGCCTATCTTCGAGAACAAGCCCTCGAATGATGAATATGTA TCTGACCATAGGGAAACCATTCGTCTCCAGCGTTCCTTCGGAACAGCTGCAGAGCGAGCGCGGCGGAACATGAAC GCGAAGCTGGCCAACCCGCTAGCCGGATATACCCAAGAGGAATTGCGTCAGCAGGGCATCAACTTTGCCATCACT CACCAGATGGGTGACGAAGAGGATGTGCGTGCCTTTGCAATGGGTGCCATGCTGGCGCAAGTCCCTGAAAGATAT GCAGAGGTGCCCGGTCTGACGCCCCAAGAGCTGGCAGTTCTGGAGAATGAATACGCTCATCGCTGGTCCCAGCCA TGGACAATGTACCCGGTCATTTGCTTGTGTTCCCTGTCGGCTGCTGTTCAGGGAATGGATGAAACCGTCGTCAAT GGCGCCCAGATTTTCTATAAGCATCAGTTCGGCATTGATCGTGGCAGCGAGTCCAGGTCAAATTGGCTGCTTGGT CTCGTAAACTGCGCACCCTACATGTGTTGTGCTCTGGTCGGCTGCTGGTTAACAGTCCCGTTCAATGCCTGGTTT GGCCGACGAGGCACCATCTTCATTACCTGCTGTTTTTCGGCCATCACCTGTCTCTGGCAAGGATTCGTCAACACT TGGTGGCACATGTTCATTGCGCGCTTTGCTCTGGGCTTTGGCATTGGACCCAAGTCAGCTACTGTCCCGATCTAT GCCGCAGAAACAGCCCCTCCAGTCATTCGTGGTGCCTTGGTCATGCAATGGCAGATGTGGACCGCCTTTGGCATC ATGTTCGGCTATGTCGCTGACCTGGCTTTCTTCGAGATACAGGACCCTGCAGGTATCGTCGGTCTTAATTGGCGC TTGATGATGGCCTCGGCCTTGTTTCCAGCCCTCCTCGTCTGCTGCTTTGTATTCACGTGCCCCGAATCGCCCCGC TGGTACATGTCGCGCAACCGCTATGACAAGGCCTATGAGTCCATGTGCAGTTTGCGCTTCAACAAGGTCCAAGCT GCGCGTGACTTGTACTACATGCACACATTACTGCAGGCAGAGACGGGCATGAAACTCGGGCAGAACAAACTCATC GAACTCATCGCAGTTCCCCGAAACCGGCGCGCATTGATTGCATCGGAGCTGGTCATGTTCATGCAACAGTTCTGC GGTGTGAACGTTATTGCCTACTATTCATCCGAGATCTTTCTCGGGACTACGGGAAACTCTCTGACGCAGTTGTCC GTATCAAACCAGCGAAAGGCACTGGCAGCATCTTTTGGCTGGGGTATGATCAACTGGCTTTTCGCTATACCGGCT GTATACACAATTGATACCTTTGGCCGTCGCAACCTTCTCCTCACCACCTTTCCTCTAATGGCTTTATCCATGTTC TTCACCGGCTTCAGCTTCTGGATACCGGAAGATACGCACTCTTCAGCCAGGCTTGGATGTATTGCATTAGGCACA TATCTATTCGCGATAGTGTATTCTGTCGGGGAGGGTCCAGTACCATTTACCTATTCCGCCGAGGCCTACCCACTC TACGTCCGCTCCCACGGCATGGCCTTGGCGACTGCGACGACATGGCTGTTCAATTGCCTGCTAGCCATCACCTGG CCATCTCTGCGTGCGGCATTTACCCCGCAGGGGGCATTCAGCTGGTACGCGGGGTGGTGCATCGTCGGGTGGTGG CTGATCCTGATGTTCATGCCTGAGACCAAGGGGAAGACGCTGGAAGAACTGGACCAGGTCTTTTCAGTTCCCACC CGCTTCCATGCCGCATACGGTCTCCGCCAGATTCCTTACTTTTTCCGAAGGTACATTTTACGTCAGAAAGTCCGC CCGGAGATCCTGTATGAGCGAGATGACGAGGTTCCCATGACCGAGGCTGGCTACAATACTGCCTGA |
| Transcript | >Ani_SJS100_1|g6904.t1 ATGTTTGGAAAAGAAGAATGCCCGGTCATCGGGGAGCCTATCTTCGAGAACAAGCCCTCGAATGATGAATATGTA TCTGACCATAGGGAAACCATTCGTCTCCAGCGTTCCTTCGGAACAGCTGCAGAGCGAGCGCGGCGGAACATGAAC GCGAAGCTGGCCAACCCGCTAGCCGGATATACCCAAGAGGAATTGCGTCAGCAGGGCATCAACTTTGCCATCACT CACCAGATGGGTGACGAAGAGGATGTGCGTGCCTTTGCAATGGGTGCCATGCTGGCGCAAGTCCCTGAAAGATAT GCAGAGGTGCCCGGTCTGACGCCCCAAGAGCTGGCAGTTCTGGAGAATGAATACGCTCATCGCTGGTCCCAGCCA TGGACAATGTACCCGGTCATTTGCTTGTGTTCCCTGTCGGCTGCTGTTCAGGGAATGGATGAAACCGTCGTCAAT GGCGCCCAGATTTTCTATAAGCATCAGTTCGGCATTGATCGTGGCAGCGAGTCCAGGTCAAATTGGCTGCTTGGT CTCGTAAACTGCGCACCCTACATGTGTTGTGCTCTGGTCGGCTGCTGGTTAACAGTCCCGTTCAATGCCTGGTTT GGCCGACGAGGCACCATCTTCATTACCTGCTGTTTTTCGGCCATCACCTGTCTCTGGCAAGGATTCGTCAACACT TGGTGGCACATGTTCATTGCGCGCTTTGCTCTGGGCTTTGGCATTGGACCCAAGTCAGCTACTGTCCCGATCTAT GCCGCAGAAACAGCCCCTCCAGTCATTCGTGGTGCCTTGGTCATGCAATGGCAGATGTGGACCGCCTTTGGCATC ATGTTCGGCTATGTCGCTGACCTGGCTTTCTTCGAGATACAGGACCCTGCAGGTATCGTCGGTCTTAATTGGCGC TTGATGATGGCCTCGGCCTTGTTTCCAGCCCTCCTCGTCTGCTGCTTTGTATTCACGTGCCCCGAATCGCCCCGC TGGTACATGTCGCGCAACCGCTATGACAAGGCCTATGAGTCCATGTGCAGTTTGCGCTTCAACAAGGTCCAAGCT GCGCGTGACTTGTACTACATGCACACATTACTGCAGGCAGAGACGGGCATGAAACTCGGGCAGAACAAACTCATC GAACTCATCGCAGTTCCCCGAAACCGGCGCGCATTGATTGCATCGGAGCTGGTCATGTTCATGCAACAGTTCTGC GGTGTGAACGTTATTGCCTACTATTCATCCGAGATCTTTCTCGGGACTACGGGAAACTCTCTGACGCAGTTGTCC GTATCAAACCAGCGAAAGGCACTGGCAGCATCTTTTGGCTGGGGTATGATCAACTGGCTTTTCGCTATACCGGCT GTATACACAATTGATACCTTTGGCCGTCGCAACCTTCTCCTCACCACCTTTCCTCTAATGGCTTTATCCATGTTC TTCACCGGCTTCAGCTTCTGGATACCGGAAGATACGCACTCTTCAGCCAGGCTTGGATGTATTGCATTAGGCACA TATCTATTCGCGATAGTGTATTCTGTCGGGGAGGGTCCAGTACCATTTACCTATTCCGCCGAGGCCTACCCACTC TACGTCCGCTCCCACGGCATGGCCTTGGCGACTGCGACGACATGGCTGTTCAATTGCCTGCTAGCCATCACCTGG CCATCTCTGCGTGCGGCATTTACCCCGCAGGGGGCATTCAGCTGGTACGCGGGGTGGTGCATCGTCGGGTGGTGG CTGATCCTGATGTTCATGCCTGAGACCAAGGGGAAGACGCTGGAAGAACTGGACCAGGTCTTTTCAGTTCCCACC CGCTTCCATGCCGCATACGGTCTCCGCCAGATTCCTTACTTTTTCCGAAGGTACATTTTACGTCAGAAAGTCCGC CCGGAGATCCTGTATGAGCGAGATGACGAGGTTCCCATGACCGAGGCTGGCTACAATACTGCCTGA |
| Gene | >Ani_SJS100_1|g6904.t1 ATGTTTGGAAAAGAAGAATGCCCGGTCATCGGGGAGCCTATCTTCGAGAACAAGCCCTCGAATGATGAATATGTA TCTGACCATAGGGAAACCATTCGTCTCCAGCGTTCCTTCGGAACAGCTGCAGAGCGAGCGCGGCGGAACATGAAC GCGAAGCTGGCCAACCCGCTAGCCGGATATACCCAAGAGGAATTGCGTCAGCAGGGCATCAACTTTGCCATCACT CACCAGATGGGTGACGAAGAGGATGTGCGTGCCTTTGCAATGGGTGCCATGCTGGCGCAAGTCCCTGAAAGATAT GCAGAGGTGCCCGGTCTGACGCCCCAAGAGCTGGCAGTTCTGGAGAATGAATACGCTCATCGCTGGTCCCAGCCA TGGACAATGTACCCGGTCATTTGCTTGTGTTCCCTGTCGGCTGCTGTTCAGGGAATGGGTAAGTTCAAGACATTC CTCAACACGCCTGGTGTGGCACGACACAGGCTAAGGCAATCGTGCACCTGCAGATGAAACCGTCGTCAATGGCGC CCAGATTTTCTATAAGCATCAGTTCGGCATTGATCGTGGCAGCGAGTCCAGGTCAAATTGGCTGCTTGGTCTCGT AAACTGCGCACCCTACATGTGTTGTGCTCTGGTCGGCTGCTGGTTAACAGTCCCGTTCAATGCCTGGTTTGGCCG ACGAGGCACCATCTTCATTACCTGCTGTTTTTCGGCCATCACCTGTCTCTGGCAAGGATTCGTCAACACTTGGTG GCACATGTTCATTGCGCGCTTTGCTCTGGGCTTTGGCATTGGACCCAAGTCAGCTACTGTCCCGATCTATGCCGC AGAAACAGCCCCTCCAGTCATTCGTGGTGCCTTGGTCATGCAATGGCAGATGTGGACCGCCTTTGGCATCATGTT CGGCTATGTCGCTGACCTGGCTTTCTTCGAGATACAGGACCCTGCAGGTATCGTCGGTCTTAATTGGCGCTTGAT GATGGCCTCGGCCTTGTTTCCAGCCCTCCTCGTCTGCTGCTTTGTATTCACGTGCCCCGAATCGCCCCGCTGGTA CATGTCGCGCAACCGCTATGACAAGGCCTATGAGTCCATGTGCAGTTTGCGCTTCAACAAGGTCCAAGCTGCGCG TGACTTGTACTACATGCACACATTACTGCAGGCAGAGACGGGCATGAAACTCGGGCAGAACAAACTCATCGAACT CATCGCAGTTCCCCGAAACCGGCGCGCATTGATTGCATCGGAGCTGGTCATGTTCATGCAACAGGTATGTCAACT CCCTACTGCAATAAAGCTCCTGCTAACTGATTGCATTAGTTCTGCGGTATGTTACCGAAAATCCCCAAAATGCAA CGTACTAACTGTCCTGCAGGTGTGAACGTTATTGCCTACTATTCATCCGAGATCTTTCTCGGGACTACGGGAAAC TCTCTGACGCAGTTGTCCGTATCAAACCAGCGAAAGGCACTGGCAGCATCTTTTGGCTGGGGTATGATCAACTGG CTTTTCGCTATACCGGCTGTATACACAATTGATACCTTTGGCCGTCGCAACCTTCTCCTCACCACCTTTCCTCTA ATGGCTTTATCCATGTTCTTCACCGGCTTCAGCTTCTGGATACCGGAAGATACGCACTCTTCAGCCAGGCTTGGA TGTATTGCATTAGGCACATATCTATTCGCGATAGTGTATTCTGTCGGGGAGGGTCCAGTACCATTTACCTATTCC GCCGAGGCCTACCCACTCTACGTCCGCTCCCACGGCATGGCCTTGGCGACTGCGACGACATGGCTGTTCAATTGC CTGCTAGCCATCACCTGGCCATCTCTGCGTGCGGCATTTACCCCGCAGGGGGCATTCAGCTGGTACGCGGGGTGG TGCATCGTCGGGTGGTGGCTGATCCTGATGTTCATGCCTGAGACCAAGGGGAAGACGCTGGAAGAACTGGACCAG GTCTTTTCAGTTCCCACCCGCTTCCATGCCGCATACGGTCTCCGCCAGATTCCTTACTTTTTCCGAAGGTACATT TTACGTCAGAAAGTCCGCCCGGAGATCCTGTATGAGCGAGATGACGAGGTTCCCATGACCGAGGCTGGCTACAAT ACTGCCTGA |