Protein ID | Ani_SJS100_1|g6843.t1 |
Gene name | |
Location | scaffold_044:178478..179972 |
Strand | + |
Gene length (bp) | 1494 |
Transcript length (bp) | 1365 |
Coding sequence length (bp) | 1365 |
Protein length (aa) | 455 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10436 | BCDHK_Adom3 | Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase | 7.9E-45 | 45 | 219 |
PF02518 | HATPase_c | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 3.4E-11 | 264 | 443 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 20 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g6843.t1 MANFYDGARSFSSSPFVQTTTSPRHAFAYGANDEVARLAASRRRPLTLADLLKHGRPPLCKDALLASANFTLSLL PARLASRIEALRNLPFIVVSNPHVSKIYNNYLHSLSTLLPYQQRQVTTLEEENQFAEVLADLVHTHTNTIPILAR GFLECRRYIDPTEVTRFLDTHLRARIGTRLIAEQHLALHFASQPVRDDPAEQQEPPKDAAPSNDIGVIDTALQPA RIVKSCEDFVGEICELKYGVRPRLNIGGQPDASFAHVPVHVEYILTELLKNAFRAVIESGNGSEPIEVTIAAAPD VPASPVHDPKAKEKWSHSDSDTGFHMDTVVGTADANESIKCWSPSQQSITIRIRDRGGGIPPEVLPNIWSYSFTT FSDYGMNGSENGSMDALNTIAGSGGHLSSIAGLGYGLPLSRAYAEYFGGSIAVQSLWGWGTDVYLTLQGVAMPSC VPQH* |
Coding | >Ani_SJS100_1|g6843.t1 ATGGCCAACTTCTACGATGGCGCAAGGTCCTTTTCTTCGTCACCTTTTGTGCAGACTACTACATCCCCACGGCAC GCGTTTGCCTACGGCGCCAATGATGAAGTTGCACGTCTCGCCGCCAGTCGTCGCCGCCCATTGACTCTTGCAGAT CTGCTCAAACATGGCCGCCCGCCCCTGTGCAAAGATGCCCTCCTGGCTTCGGCCAACTTCACGCTCTCCCTCCTT CCAGCCCGACTAGCGTCTCGCATCGAGGCTCTCCGTAACCTCCCGTTTATCGTCGTTTCGAATCCGCATGTATCC AAGATCTACAATAATTACCTACACTCCCTCTCGACTCTCCTACCATATCAACAACGTCAGGTTACGACGCTAGAG GAGGAGAATCAATTCGCAGAGGTACTTGCCGATCTTGTGCATACACATACGAACACCATTCCTATTCTTGCCCGC GGCTTTCTTGAATGTCGCCGATATATCGATCCCACTGAGGTAACACGGTTCCTGGATACACACCTGCGCGCCAGA ATCGGCACGCGGCTGATAGCAGAGCAACACTTGGCACTGCACTTTGCCTCGCAGCCTGTCCGTGATGATCCCGCT GAACAACAAGAACCACCCAAGGATGCTGCGCCATCAAACGATATCGGAGTCATCGATACCGCGCTGCAACCCGCC CGCATAGTCAAATCGTGCGAGGATTTCGTGGGTGAGATCTGCGAGCTCAAGTATGGGGTTCGACCGCGATTGAAT ATTGGCGGACAGCCAGACGCTTCTTTCGCGCATGTGCCGGTCCACGTGGAGTATATTCTTACAGAGCTGCTGAAG AATGCTTTCCGGGCGGTTATTGAGTCTGGGAATGGGAGCGAACCCATTGAGGTAACTATTGCTGCGGCACCTGAT GTTCCTGCCAGTCCGGTACATGACCCGAAGGCGAAGGAGAAGTGGAGTCATTCCGATTCGGACACTGGATTTCAC ATGGACACGGTGGTGGGGACAGCAGATGCGAACGAGTCGATCAAGTGCTGGTCGCCGTCGCAGCAGAGCATTACG ATCCGCATCCGAGATCGGGGAGGAGGTATCCCTCCGGAAGTGCTGCCGAATATCTGGTCATACAGCTTCACTACG TTCTCTGACTATGGTATGAACGGGTCGGAGAATGGCAGCATGGACGCGCTAAACACGATAGCCGGGAGTGGGGGG CATTTGAGCAGCATCGCCGGACTGGGGTATGGGCTGCCGCTGAGTCGGGCATATGCAGAGTATTTTGGAGGGAGC ATTGCGGTGCAGAGCTTGTGGGGATGGGGAACAGATGTATACTTGACGTTACAGGGAGTAGCCATGCCATCTTGT GTGCCGCAACATTGA |
Transcript | >Ani_SJS100_1|g6843.t1 ATGGCCAACTTCTACGATGGCGCAAGGTCCTTTTCTTCGTCACCTTTTGTGCAGACTACTACATCCCCACGGCAC GCGTTTGCCTACGGCGCCAATGATGAAGTTGCACGTCTCGCCGCCAGTCGTCGCCGCCCATTGACTCTTGCAGAT CTGCTCAAACATGGCCGCCCGCCCCTGTGCAAAGATGCCCTCCTGGCTTCGGCCAACTTCACGCTCTCCCTCCTT CCAGCCCGACTAGCGTCTCGCATCGAGGCTCTCCGTAACCTCCCGTTTATCGTCGTTTCGAATCCGCATGTATCC AAGATCTACAATAATTACCTACACTCCCTCTCGACTCTCCTACCATATCAACAACGTCAGGTTACGACGCTAGAG GAGGAGAATCAATTCGCAGAGGTACTTGCCGATCTTGTGCATACACATACGAACACCATTCCTATTCTTGCCCGC GGCTTTCTTGAATGTCGCCGATATATCGATCCCACTGAGGTAACACGGTTCCTGGATACACACCTGCGCGCCAGA ATCGGCACGCGGCTGATAGCAGAGCAACACTTGGCACTGCACTTTGCCTCGCAGCCTGTCCGTGATGATCCCGCT GAACAACAAGAACCACCCAAGGATGCTGCGCCATCAAACGATATCGGAGTCATCGATACCGCGCTGCAACCCGCC CGCATAGTCAAATCGTGCGAGGATTTCGTGGGTGAGATCTGCGAGCTCAAGTATGGGGTTCGACCGCGATTGAAT ATTGGCGGACAGCCAGACGCTTCTTTCGCGCATGTGCCGGTCCACGTGGAGTATATTCTTACAGAGCTGCTGAAG AATGCTTTCCGGGCGGTTATTGAGTCTGGGAATGGGAGCGAACCCATTGAGGTAACTATTGCTGCGGCACCTGAT GTTCCTGCCAGTCCGGTACATGACCCGAAGGCGAAGGAGAAGTGGAGTCATTCCGATTCGGACACTGGATTTCAC ATGGACACGGTGGTGGGGACAGCAGATGCGAACGAGTCGATCAAGTGCTGGTCGCCGTCGCAGCAGAGCATTACG ATCCGCATCCGAGATCGGGGAGGAGGTATCCCTCCGGAAGTGCTGCCGAATATCTGGTCATACAGCTTCACTACG TTCTCTGACTATGGTATGAACGGGTCGGAGAATGGCAGCATGGACGCGCTAAACACGATAGCCGGGAGTGGGGGG CATTTGAGCAGCATCGCCGGACTGGGGTATGGGCTGCCGCTGAGTCGGGCATATGCAGAGTATTTTGGAGGGAGC ATTGCGGTGCAGAGCTTGTGGGGATGGGGAACAGATGTATACTTGACGTTACAGGGAGTAGCCATGCCATCTTGT GTGCCGCAACATTGA |
Gene | >Ani_SJS100_1|g6843.t1 ATGGCCAACTTCTACGATGGCGGTAAGACGAGCCCTGCAGACTGCGTCTCGGGGTGCTAGCCTTCGATATCATTG TTTCTCAACCTTTCCAGCAAGGTCCTTTTCTTCGTCACCTTTTGTGCAGACTACTACATCCCCACGGCACGCGTT TGCCTACGGCGCCAATGATGAAGTTGCACGTCTCGCCGCCAGTCGTCGCCGCCCATTGACTCTTGCAGATCTGCT CAAGTATGCAGCATGCGATGAACTTTGTTAGTTGATATAGGAATAACTGTTTAATTTGATAGACATGGCCGCCCG CCCCTGTGCAAAGATGCCCTCCTGGCTTCGGCCAACTTCACGCTCTCCCTCCTTCCAGCCCGACTAGCGTCTCGC ATCGAGGCTCTCCGTAACCTCCCGTTTATCGTCGTTTCGAATCCGCATGTATCCAAGATCTACAATAATTACCTA CACTCCCTCTCGACTCTCCTACCATATCAACAACGTCAGGTTACGACGCTAGAGGAGGAGAATCAATTCGCAGAG GTACTTGCCGATCTTGTGCATACACATACGAACACCATTCCTATTCTTGCCCGCGGCTTTCTTGAATGTCGCCGA TATATCGATCCCACTGAGGTAACACGGTTCCTGGATACACACCTGCGCGCCAGAATCGGCACGCGGCTGATAGCA GAGCAACACTTGGCACTGCACTTTGCCTCGCAGCCTGTCCGTGATGATCCCGCTGAACAACAAGAACCACCCAAG GATGCTGCGCCATCAAACGATATCGGAGTCATCGATACCGCGCTGCAACCCGCCCGCATAGTCAAATCGTGCGAG GATTTCGTGGGTGAGATCTGCGAGCTCAAGTATGGGGTTCGACCGCGATTGAATATTGGCGGACAGCCAGACGCT TCTTTCGCGCATGTGCCGGTCCACGTGGAGTATATTCTTACAGAGCTGCTGAAGAATGCTTTCCGGGCGGTTATT GAGTCTGGGAATGGGAGCGAACCCATTGAGGTAACTATTGCTGCGGCACCTGATGTTCCTGCCAGTCCGGTACAT GACCCGAAGGCGAAGGAGAAGTGGAGTCATTCCGATTCGGACACTGGATTTCACATGGACACGGTGGTGGGGACA GCAGATGCGAACGAGTCGATCAAGTGCTGGTCGCCGTCGCAGCAGAGCATTACGATCCGCATCCGAGATCGGGGA GGAGGTATCCCTCCGGAAGTGCTGCCGAATATCTGGTCATACAGCTTCACTACGTTCTCTGACTATGGTATGAAC GGGTCGGAGAATGGCAGCATGGACGCGCTAAACACGATAGCCGGGAGTGGGGGGCATTTGAGCAGCATCGCCGGA CTGGGGTATGGGCTGCCGCTGAGTCGGGCATATGCAGAGTATTTTGGAGGGAGCATTGCGGTGCAGAGCTTGTGG GGATGGGGAACAGATGTATACTTGACGTTACAGGGAGTAGCCATGCCATCTTGTGTGCCGCAACATTGA |