Protein ID | Ani_SJS100_1|g6828.t1 |
Gene name | |
Location | scaffold_044:124883..126591 |
Strand | + |
Gene length (bp) | 1708 |
Transcript length (bp) | 1563 |
Coding sequence length (bp) | 1563 |
Protein length (aa) | 521 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00569 | ZZ | Zinc finger, ZZ type | 1.5E-10 | 17 | 61 |
PF00249 | Myb_DNA-binding | Myb-like DNA-binding domain | 6.5E-10 | 81 | 123 |
PF04433 | SWIRM | SWIRM domain | 1.9E-08 | 448 | 518 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0008270 | zinc ion binding | Yes |
GO:0043169 | cation binding | No |
GO:0046872 | metal ion binding | No |
GO:0005488 | binding | No |
GO:0043167 | ion binding | No |
GO:0046914 | transition metal ion binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 37 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g6828.t1 MGVIRKKTASRGTEAGTKYHCDICSVDVTSTVRVSCAHPACHEYDLCVPCFAAGEKSKNHDPSTHPFQVIEQNSV PIFEEDWGADEELLLLEGAEIYGLGSWADIADHIGGYRTKEEVRDHYISAYIDSPNFPLPERADPDDKRLSEAIS KEEFQARKKRRIEERKEAAKAAPPTTPKQKPTASVPACHEVQGYMPGRLEFETEFMNEAEEAVQHMTFEPGAGET ANGETDAEMELKMTVVDIYNSRLTARTERKKILFEHNLLEYRKNTALEKKRTKEERDLLNKAKPFARMMNHDDFE EFNKGLEYEHNLRLAITQLQEWRQMGIGDLKGGEKYEQEKQQRAQRLMPQGSFDRFASTRPTKQSQQPEQPSAAS QLTTPELPLRLQKASGAPKAPEPPNPPMNDFDRAFAATNGDGISTPQPVKTKFVIQPLNGVIPWKLENEGAPDLH LLTKEEVEVCNVLHMQPKPYLVIKETLLKEAMKQGGSLKKKDARAICKVDSTKTSRIYDFMVHSGWINKS* |
Coding | >Ani_SJS100_1|g6828.t1 ATGGGTGTAATACGGAAGAAGACCGCCTCGCGCGGCACTGAAGCGGGCACCAAGTATCACTGTGATATTTGCTCG GTTGATGTGACTTCGACGGTTCGCGTATCTTGCGCCCATCCCGCCTGCCACGAATACGATCTCTGCGTCCCCTGT TTCGCTGCCGGAGAGAAATCCAAGAACCATGACCCGTCGACACATCCGTTCCAGGTGATCGAACAGAACTCGGTC CCGATCTTCGAGGAAGACTGGGGTGCGGACGAGGAGCTCCTGCTGCTGGAAGGCGCCGAGATCTACGGACTGGGC TCATGGGCGGACATTGCAGACCACATTGGCGGTTACCGCACCAAGGAGGAGGTCCGCGACCACTACATCAGCGCC TATATCGATAGTCCAAACTTCCCGTTACCGGAACGCGCCGATCCGGATGACAAGCGCCTCTCGGAGGCCATTTCG AAGGAAGAATTCCAGGCGCGGAAGAAACGCCGCATTGAGGAGCGCAAAGAAGCGGCCAAGGCAGCTCCCCCCACA ACACCGAAGCAGAAGCCTACGGCCAGTGTACCGGCTTGTCACGAAGTGCAGGGTTACATGCCGGGTCGGTTGGAG TTCGAGACAGAGTTTATGAACGAAGCCGAGGAAGCGGTACAGCATATGACATTTGAGCCTGGCGCGGGCGAGACA GCGAACGGCGAGACGGACGCGGAAATGGAACTGAAAATGACCGTAGTGGATATCTATAACTCACGGCTTACGGCG CGCACGGAGCGCAAGAAGATCCTTTTCGAGCACAATCTCCTCGAGTACCGTAAAAACACGGCGCTGGAGAAGAAG CGCACGAAAGAGGAGCGCGATCTGCTGAACAAGGCGAAGCCGTTTGCCCGGATGATGAACCACGATGATTTCGAA GAGTTCAACAAGGGTCTTGAGTACGAGCACAACCTGCGGCTAGCCATCACGCAGCTCCAGGAATGGCGCCAGATG GGAATTGGCGATCTCAAGGGTGGAGAGAAATACGAACAGGAGAAGCAACAGCGGGCACAGCGGCTGATGCCGCAG GGCTCATTCGATCGGTTCGCCAGCACGCGACCGACGAAGCAGTCGCAGCAACCAGAACAGCCATCGGCCGCGAGT CAGCTGACGACCCCGGAGCTCCCTCTCCGGTTACAAAAGGCGTCTGGGGCGCCTAAGGCACCAGAGCCTCCCAAC CCGCCGATGAATGATTTTGATCGGGCGTTTGCCGCCACCAATGGCGACGGGATCAGCACGCCGCAGCCAGTGAAG ACCAAGTTCGTGATCCAGCCACTAAACGGAGTGATTCCGTGGAAACTGGAGAACGAGGGAGCACCGGATTTGCAC CTGCTGACAAAGGAGGAAGTCGAGGTGTGCAATGTGCTGCACATGCAGCCCAAGCCATACCTGGTAATTAAGGAG ACGTTATTGAAAGAGGCGATGAAGCAGGGCGGCAGTTTAAAGAAGAAGGACGCGCGAGCTATTTGCAAGGTCGAC AGTACCAAGACGAGTCGGATCTACGATTTCATGGTACACAGCGGCTGGATCAACAAGAGCTGA |
Transcript | >Ani_SJS100_1|g6828.t1 ATGGGTGTAATACGGAAGAAGACCGCCTCGCGCGGCACTGAAGCGGGCACCAAGTATCACTGTGATATTTGCTCG GTTGATGTGACTTCGACGGTTCGCGTATCTTGCGCCCATCCCGCCTGCCACGAATACGATCTCTGCGTCCCCTGT TTCGCTGCCGGAGAGAAATCCAAGAACCATGACCCGTCGACACATCCGTTCCAGGTGATCGAACAGAACTCGGTC CCGATCTTCGAGGAAGACTGGGGTGCGGACGAGGAGCTCCTGCTGCTGGAAGGCGCCGAGATCTACGGACTGGGC TCATGGGCGGACATTGCAGACCACATTGGCGGTTACCGCACCAAGGAGGAGGTCCGCGACCACTACATCAGCGCC TATATCGATAGTCCAAACTTCCCGTTACCGGAACGCGCCGATCCGGATGACAAGCGCCTCTCGGAGGCCATTTCG AAGGAAGAATTCCAGGCGCGGAAGAAACGCCGCATTGAGGAGCGCAAAGAAGCGGCCAAGGCAGCTCCCCCCACA ACACCGAAGCAGAAGCCTACGGCCAGTGTACCGGCTTGTCACGAAGTGCAGGGTTACATGCCGGGTCGGTTGGAG TTCGAGACAGAGTTTATGAACGAAGCCGAGGAAGCGGTACAGCATATGACATTTGAGCCTGGCGCGGGCGAGACA GCGAACGGCGAGACGGACGCGGAAATGGAACTGAAAATGACCGTAGTGGATATCTATAACTCACGGCTTACGGCG CGCACGGAGCGCAAGAAGATCCTTTTCGAGCACAATCTCCTCGAGTACCGTAAAAACACGGCGCTGGAGAAGAAG CGCACGAAAGAGGAGCGCGATCTGCTGAACAAGGCGAAGCCGTTTGCCCGGATGATGAACCACGATGATTTCGAA GAGTTCAACAAGGGTCTTGAGTACGAGCACAACCTGCGGCTAGCCATCACGCAGCTCCAGGAATGGCGCCAGATG GGAATTGGCGATCTCAAGGGTGGAGAGAAATACGAACAGGAGAAGCAACAGCGGGCACAGCGGCTGATGCCGCAG GGCTCATTCGATCGGTTCGCCAGCACGCGACCGACGAAGCAGTCGCAGCAACCAGAACAGCCATCGGCCGCGAGT CAGCTGACGACCCCGGAGCTCCCTCTCCGGTTACAAAAGGCGTCTGGGGCGCCTAAGGCACCAGAGCCTCCCAAC CCGCCGATGAATGATTTTGATCGGGCGTTTGCCGCCACCAATGGCGACGGGATCAGCACGCCGCAGCCAGTGAAG ACCAAGTTCGTGATCCAGCCACTAAACGGAGTGATTCCGTGGAAACTGGAGAACGAGGGAGCACCGGATTTGCAC CTGCTGACAAAGGAGGAAGTCGAGGTGTGCAATGTGCTGCACATGCAGCCCAAGCCATACCTGGTAATTAAGGAG ACGTTATTGAAAGAGGCGATGAAGCAGGGCGGCAGTTTAAAGAAGAAGGACGCGCGAGCTATTTGCAAGGTCGAC AGTACCAAGACGAGTCGGATCTACGATTTCATGGTACACAGCGGCTGGATCAACAAGAGCTGA |
Gene | >Ani_SJS100_1|g6828.t1 ATGGGTGTAATACGGAAGAAGACCGCCTCGCGCGGCACTGAAGCGGGCACCAAGTATCACTGTGATATTTGCTCG GTTGATGTGACTTCGACGGTATAGTCTGCGATCTGTGTCCCAAGGACTTTCGCCTCTTGTCGGTCTTAAACCTAA CTTATCGGTCTCTTTCTAGGTTCGCGTATCTTGCGCCCATCCCGCCTGCCACGAATACGATCTCTGCGTCCCCTG TTTCGCTGCCGGAGAGAAATCCAAGAACCATGACCCGTCGACACATCCGTTCCAGGTGATCGAACAGAACTCGGT CCCGATCTTCGAGGAAGACTGGGGTGCGGACGAGGAGCTCCTGCTGCTGGAAGGCGCCGAGATCTACGGACTGGG CTCATGGGCGGACATTGCAGACCACATTGGCGGTTACCGCACCAAGGAGGAGGTCCGCGACCACTACATCAGCGC CTATATCGATAGTCCAAACTTCCCGTTACCGGAACGCGCCGATCCGGATGACAAGCGCCTCTCGGAGGCCATTTC GAAGGAAGAATTCCAGGCGCGGAAGAAACGCCGCATTGAGGAGCGCAAAGAAGCGGCCAAGGCAGCTCCCCCCAC AACACCGAAGCAGAAGCCTACGGCCAGTGTACCGGCTTGTCACGAAGTGCAGGGTTACATGCCGGGTCGGTTGGA GTTCGAGACAGAGTTTATGAACGAAGCCGAGGAAGCGGTACAGCATATGACATTTGAGCCTGGCGCGGGCGAGAC AGCGAACGGCGAGACGGACGCGGAAATGGAACTGAAAATGACCGTAGTGGATATCTATAACTCACGGCTTACGGC GCGCACGGAGCGCAAGAAGATCCTTTTCGAGCACAATCTCCTCGAGTACCGTAAAAACACGGCGCTGGAGAAGAA GCGCACGAAAGAGGAGCGCGATCTGCTGAACAAGGCGAAGCCGTTTGCCCGGATGATGAACCACGATGATTTCGA AGAGTTCAACAAGGGTCTTGAGTACGAGCACAACCTGCGGCTAGCCATCACGCAGCTCCAGGAATGGCGCCAGAT GGGAATTGGCGATCTCAAGGGTGGAGAGAAATACGAACAGGAGAAGCAACAGCGGGCACAGCGGCTGATGCCGCA GGGCTCATTCGATCGGTTCGCCAGCACGCGACCGACGAAGCAGTCGCAGCAACCAGAACAGCCATCGGCCGCGAG TCAGCTGACGACCCCGGAGCTCCCTCTCCGGTTACAAAAGGCGTCTGGGGCGCCTAAGGCACCAGAGCCTCCCAA CCCGCCGATGAATGATTTTGATCGGGCGTTTGCCGCCACCAATGGCGACGGGATCAGCACGCCGCAGCCAGTGAA GACCAAGTTCGTGATCCAGCCACTAAACGGAGTGATTCCGTGGAAACTGGAGAACGAGGGAGCACCGGATTTGCA CCTGCTGACAAAGGAGGAAGTCGAGGTGTGCAATGTGCTGCACATGCAGCCCAAGCCATACCTGGTAATTAAGGA GACGTTATTGAAAGAGGCGATGAAGCAGGGCGGCAGTTTAAAGAAGAAGGACGCGCGAGCTATTTGCAAGGTCAG TCGCCTTTCCCCCCCTTCTGCCAGCAACAGGAGACGTATGGGTGTCTGACAAAGATTTCTACAGGTCGACAGTAC CAAGACGAGTCGGATCTACGATTTCATGGTACACAGCGGCTGGATCAACAAGAGCTGA |