Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g6801.t1
Gene name
Locationscaffold_044:37991..39347
Strand-
Gene length (bp)1356
Transcript length (bp)489
Coding sequence length (bp)489
Protein length (aa) 163

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 30 52 22
2 72 94 22
3 115 137 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g6801.t1
MYWLRGLSTRDRTRTVQLHLLCPIRPARHVLSLSVFLSLFLWLSLALAGLVHPHLILRLLSPLSFDSAQFLLCSL
PSLIPTFVCLFTPHYSFALSTSLGPYKETRKEQASLSSVALFCLLSIAPAGFPTCPSFNLTIVSPLYFEFTHAGT
LPFAVHRPKFPI*
Coding >Ani_SJS100_1|g6801.t1
ATGTATTGGTTACGAGGCTTAAGCACCAGGGACCGCACCCGGACAGTTCAACTTCATCTGCTCTGCCCCATTCGG
CCTGCTCGTCATGTCCTCTCCCTCTCTGTCTTTCTGTCTCTCTTTCTTTGGCTGTCACTGGCTCTTGCTGGGCTT
GTTCATCCCCATCTCATCCTGCGGCTCCTTTCTCCCCTTTCCTTCGATTCCGCTCAGTTCCTGCTCTGCTCCCTT
CCCTCGTTGATCCCGACATTCGTTTGCTTGTTCACACCCCATTATTCCTTCGCTCTATCCACTTCCCTGGGCCCT
TATAAAGAAACAAGAAAGGAGCAAGCAAGTCTTAGCTCTGTTGCGCTCTTCTGTCTACTATCTATTGCCCCTGCC
GGCTTTCCCACCTGCCCCTCGTTCAACCTTACGATCGTTTCTCCGTTATACTTCGAATTCACTCACGCCGGAACT
CTGCCCTTCGCCGTGCATCGTCCAAAGTTCCCGATTTAG
Transcript >Ani_SJS100_1|g6801.t1
ATGTATTGGTTACGAGGCTTAAGCACCAGGGACCGCACCCGGACAGTTCAACTTCATCTGCTCTGCCCCATTCGG
CCTGCTCGTCATGTCCTCTCCCTCTCTGTCTTTCTGTCTCTCTTTCTTTGGCTGTCACTGGCTCTTGCTGGGCTT
GTTCATCCCCATCTCATCCTGCGGCTCCTTTCTCCCCTTTCCTTCGATTCCGCTCAGTTCCTGCTCTGCTCCCTT
CCCTCGTTGATCCCGACATTCGTTTGCTTGTTCACACCCCATTATTCCTTCGCTCTATCCACTTCCCTGGGCCCT
TATAAAGAAACAAGAAAGGAGCAAGCAAGTCTTAGCTCTGTTGCGCTCTTCTGTCTACTATCTATTGCCCCTGCC
GGCTTTCCCACCTGCCCCTCGTTCAACCTTACGATCGTTTCTCCGTTATACTTCGAATTCACTCACGCCGGAACT
CTGCCCTTCGCCGTGCATCGTCCAAAGTTCCCGATTTAG
Gene >Ani_SJS100_1|g6801.t1
ATGTATTGGTTACGAGGCTTAAGCACCAGGGACCGCACCCGGACAGTTCAACGTTCGTGAGATATACAGTAGGAA
ACGAAGGGGGACGATAAAGGGGGCAAATACCAGGTCCAGGCATTAAATTTTCCCTCAATCTCATCATATGAGCAT
CACCAGCCTCGTCCCAGATCATCTCTAGACGGACAATGGAGTTTCATTCTGGGCGAGTCTGGTGTTCGGATCGCT
CGAATTCCGACTAGGGAAGTGCGGTATCGTAATAAAAAGAGATGCTTACATACATACCCGGTACTTACTGTAAGT
TACCATACCGCCCAAGCGCCAGCCAGACGGTGTGTACTTACCTTCTGCCCTCCATGCGTGGACGGGGTACATCAT
CAAGCCATAAAATCCAGACAAGCAGGCAGAGGGAAAATAAGAAAAGAAAAAATAAAATAGTGAAAAAGAAATAGT
AGAAGAAAGATATTCTAAGCGACCGCCTACTTGGGCAATTTTTCTTGAAACCTTTAGGATAGGACAGCTTTCTTC
TCTTTCTCAATCTTAAACGTGGAAGGAGTCCCAGTCCTCCTTCTCGTCATCTACTTTTCCGCGCCCGCAAGGTCA
CCATTCCCTCCCCCATCATCATCATCGTCGTCGTCGTCCAAAGGGGAATAATCACTTGGTGAGATCATTATACCC
TCCATCGCTGGGGCCAAGCTTCACGGAGGCTGCTCCAGTCTGAGGAAAGCCCCATCTGCCCGGGTTCCTGAAGGG
CTAAATCAAGGGTTAGAGAGAGGAGAAGCCACCAGGAGAAGAAGCACAAGTGGGTTTGCTTGTATGTAATAGGAA
GTTGGAAGTATTATCGAAACCGGTCAGTTCATCTGCTCTGCCCCATTCGGCCTGCTCGTCATGTCCTCTCCCTCT
CTGTCTTTCTGTCTCTCTTTCTTTGGCTGTCACTGGCTCTTGCTGGGCTTGTTCATCCCCATCTCATCCTGCGGC
TCCTTTCTCCCCTTTCCTTCGATTCCGCTCAGTTCCTGCTCTGCTCCCTTCCCTCGTTGATCCCGACATTCGTTT
GCTTGTTCACACCCCATTATTCCTTCGCTCTATCCACTTCCCTGGGCCCTTATAAAGAAACAAGAAAGGAGCAAG
CAAGTCTTAGCTCTGTTGCGCTCTTCTGTCTACTATCTATTGCCCCTGCCGGCTTTCCCACCTGCCCCTCGTTCA
ACCTTACGATCGTTTCTCCGTTATACTTCGAATTCACTCACGCCGGAACTCTGCCCGTCCGTCGATCAACCGCTC
GCTCTACCTTTTCTCCTGCCCAGCATTGGCTAACATTTCAGTCCCTAGTTCGCCGTGCATCGTCCAAAGTTCCCG
ATTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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