© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g680.t1 |
| Gene name | |
| Location | scaffold_002:722092..723752 |
| Strand | - |
| Gene length (bp) | 1660 |
| Transcript length (bp) | 1389 |
| Coding sequence length (bp) | 1389 |
| Protein length (aa) | 463 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.1E-27 | 67 | 442 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 3.0E-15 | 68 | 261 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 61 | 80 | 19 |
| 2 | 95 | 113 | 18 |
| 3 | 125 | 144 | 19 |
| 4 | 149 | 171 | 22 |
| 5 | 184 | 206 | 22 |
| 6 | 211 | 233 | 22 |
| 7 | 283 | 305 | 22 |
| 8 | 325 | 344 | 19 |
| 9 | 365 | 387 | 22 |
| 10 | 423 | 442 | 19 |
| Orthofinder run ID | 3 |
| Orthogroup | 7032 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g680.t1 MRTVARVFTAPVESEKETLLALLPQYGLKLAPDGIHIQWALGNCRHPRNWSLQRKVYDTTLIIFLEFFTTAISTA GSTAANNAVHDFKISKTLSIFLFVSIYLIGQAIGGVVFPPYSEVFGRKKLYVASSALYGMSCILIASVPSLIGVA MGRCLCGFLSAIPTTVVVGSIEDTFNSRERVWVICLWTMFANLGLVVGPILSTFVVAYTHWRWLFYIAAIVTGVL TLLLLTIHESRPSLLLAREVATLRKVTKIDTLEGLNPDKAPDMRSFVRIALFRPIRLLFTELIVSVVSIISAVAI ALVYLFTEALPPIYESFGFTRKQACLPFMAIGLGLSLGLLTRCLDLRIITHHRAQGRPLLPEDKLTGFWIGAPIL AVALWLFAWTIPPAVTNLPWLVSVAALVLAGYSLNEMDYVLGGYLTDSYLSYAASGLAALSLCFGVGRRSDGILC CAAVIFEVREED* |
| Coding | >Ani_SJS100_1|g680.t1 ATGAGAACTGTCGCCCGGGTCTTTACGGCCCCTGTGGAAAGCGAAAAGGAGACGCTTCTGGCGCTGCTTCCGCAA TACGGGCTCAAACTAGCCCCGGACGGGATCCATATCCAGTGGGCTCTGGGCAATTGCCGACATCCGCGAAACTGG AGCTTGCAACGTAAGGTCTATGATACCACTCTTATTATTTTCCTGGAATTTTTCACGACTGCCATTAGCACTGCC GGCTCAACTGCGGCCAACAATGCCGTCCACGACTTCAAGATCTCCAAAACCCTGTCAATCTTCCTTTTCGTCTCC ATATATCTTATCGGCCAAGCCATCGGGGGTGTCGTGTTCCCCCCATACTCTGAAGTATTTGGCCGGAAGAAGCTC TATGTGGCAAGCTCAGCCCTATACGGCATGTCATGCATCCTGATTGCATCCGTACCATCATTGATAGGAGTAGCG ATGGGCCGATGTCTCTGCGGGTTTCTGTCCGCCATCCCCACGACTGTTGTAGTGGGCAGCATTGAAGACACCTTC AATTCCCGCGAGCGAGTCTGGGTAATCTGCCTTTGGACCATGTTCGCCAATCTGGGCCTCGTCGTGGGTCCTATC CTCAGTACCTTTGTCGTGGCCTACACCCACTGGAGATGGCTTTTTTACATCGCAGCCATCGTAACCGGAGTCCTC ACCCTCCTACTCCTCACTATACACGAATCTCGTCCCTCCCTCCTCCTTGCCCGCGAAGTCGCCACTCTTCGAAAG GTCACCAAAATCGACACCTTGGAAGGTCTCAACCCGGATAAAGCCCCGGACATGCGCAGCTTCGTCCGCATCGCG CTCTTCCGCCCCATCCGCCTCCTCTTCACCGAGCTCATTGTCTCCGTCGTCTCCATCATCAGCGCCGTCGCCATC GCCCTAGTCTACCTTTTCACCGAAGCCCTTCCCCCGATCTACGAATCCTTCGGCTTCACCCGAAAACAAGCCTGC CTTCCCTTCATGGCCATCGGACTAGGTCTCTCCCTCGGTCTCCTCACCCGCTGTCTCGACCTCCGCATCATCACC CACCACCGAGCCCAAGGCCGACCACTGCTCCCCGAAGACAAATTGACCGGGTTCTGGATCGGCGCACCCATACTC GCTGTAGCGTTATGGCTTTTTGCCTGGACCATTCCTCCCGCTGTCACGAATCTCCCTTGGCTTGTGTCGGTCGCA GCTCTCGTGCTGGCTGGGTATAGTCTCAATGAGATGGACTACGTGCTGGGCGGGTATCTGACGGATAGTTATCTC AGCTATGCGGCGAGTGGTCTGGCGGCATTGAGTCTGTGTTTCGGTGTTGGCCGCCGTAGCGACGGTATTTTGTGC TGTGCCGCCGTTATTTTCGAGGTACGGGAGGAGGATTAG |
| Transcript | >Ani_SJS100_1|g680.t1 ATGAGAACTGTCGCCCGGGTCTTTACGGCCCCTGTGGAAAGCGAAAAGGAGACGCTTCTGGCGCTGCTTCCGCAA TACGGGCTCAAACTAGCCCCGGACGGGATCCATATCCAGTGGGCTCTGGGCAATTGCCGACATCCGCGAAACTGG AGCTTGCAACGTAAGGTCTATGATACCACTCTTATTATTTTCCTGGAATTTTTCACGACTGCCATTAGCACTGCC GGCTCAACTGCGGCCAACAATGCCGTCCACGACTTCAAGATCTCCAAAACCCTGTCAATCTTCCTTTTCGTCTCC ATATATCTTATCGGCCAAGCCATCGGGGGTGTCGTGTTCCCCCCATACTCTGAAGTATTTGGCCGGAAGAAGCTC TATGTGGCAAGCTCAGCCCTATACGGCATGTCATGCATCCTGATTGCATCCGTACCATCATTGATAGGAGTAGCG ATGGGCCGATGTCTCTGCGGGTTTCTGTCCGCCATCCCCACGACTGTTGTAGTGGGCAGCATTGAAGACACCTTC AATTCCCGCGAGCGAGTCTGGGTAATCTGCCTTTGGACCATGTTCGCCAATCTGGGCCTCGTCGTGGGTCCTATC CTCAGTACCTTTGTCGTGGCCTACACCCACTGGAGATGGCTTTTTTACATCGCAGCCATCGTAACCGGAGTCCTC ACCCTCCTACTCCTCACTATACACGAATCTCGTCCCTCCCTCCTCCTTGCCCGCGAAGTCGCCACTCTTCGAAAG GTCACCAAAATCGACACCTTGGAAGGTCTCAACCCGGATAAAGCCCCGGACATGCGCAGCTTCGTCCGCATCGCG CTCTTCCGCCCCATCCGCCTCCTCTTCACCGAGCTCATTGTCTCCGTCGTCTCCATCATCAGCGCCGTCGCCATC GCCCTAGTCTACCTTTTCACCGAAGCCCTTCCCCCGATCTACGAATCCTTCGGCTTCACCCGAAAACAAGCCTGC CTTCCCTTCATGGCCATCGGACTAGGTCTCTCCCTCGGTCTCCTCACCCGCTGTCTCGACCTCCGCATCATCACC CACCACCGAGCCCAAGGCCGACCACTGCTCCCCGAAGACAAATTGACCGGGTTCTGGATCGGCGCACCCATACTC GCTGTAGCGTTATGGCTTTTTGCCTGGACCATTCCTCCCGCTGTCACGAATCTCCCTTGGCTTGTGTCGGTCGCA GCTCTCGTGCTGGCTGGGTATAGTCTCAATGAGATGGACTACGTGCTGGGCGGGTATCTGACGGATAGTTATCTC AGCTATGCGGCGAGTGGTCTGGCGGCATTGAGTCTGTGTTTCGGTGTTGGCCGCCGTAGCGACGGTATTTTGTGC TGTGCCGCCGTTATTTTCGAGGTACGGGAGGAGGATTAG |
| Gene | >Ani_SJS100_1|g680.t1 ATGAGAACTGTCGCCCGGGTCTTTACGGCCCCTGTGGAAAGCGAAAAGGAGACGCTTCTGGCGCTGCTTCCGCAA TACGGGCTCAAACTAGCCCCGGACGGGATCCATATCCAGTGGGCTCTGGGCAATTGCCGACATCCGCGAAACTGG AGCTTGCAACGTAAGGTCTATGATACCACTCTTATTATTTTCCTGGAATTTTTCACGTAAGAGGCTCCCCGATCT TGATGGTGTTTAAACTAATTGTTCCAGGACTGCCATTAGCACTGCCGGCGTAGGTAATAAAATGTTATCACGGGT GTCCACTTGCTGAATATATAGTCAACTGCGGCCAACAATGCCGTCCACGACTTCAAGATCTCCAAAACCCTGTCA ATCTTCCTTTTCGTCTCCATGTCAGTATACCTCTTCTTTTCTCTTCAAATACCCCAGTCTGACTTCTTAGATATC TTATCGGCCAAGCCATCGGGGGTGTCGTGTTCCCCCCATACTCTGAAGTATTTGGCCGGAAGAAGCTCTATGTGG CAAGCTCAGCCCTATACGGCATGTCATGCATCCTGATTGCATCCGTACCATCATTGATAGGAGTAGCGATGGGCC GATGTCTCTGCGGGTTTCTGTCCGCCATCCCCACGACTGTTGTAGTGGGCAGCATTGAAGACACCTTCAATTCCC GCGAGCGAGTCTGGGTAATCTGCCTTTGGACCATGTTCGCCAATCTGGGCCTCGTCGTGGGTCCTATCCTCAGTA CCTTTGTCGTGGCCTACACCCACTGGTATCTACTTCCTTTCCCCAGCATCTGCCAATATATTCACTAACACTCCA CAAGGAGATGGCTTTTTTACATCGCAGCCATCGTAACCGGAGTCCTCACCCTCCTACTCCTCACTATACACGAAT CTCGTCCCTCCCTCCTCCTTGCCCGCGAAGTCGCCACTCTTCGAAAGGTCACCAAAATCGACACCTTGGAAGGTC TCAACCCGGATAAAGCCCCGGACATGCGCAGCTTCGTCCGCATCGCGCTCTTCCGCCCCATCCGCCTCCTCTTCA CCGAGCTCATTGTCTCCGTCGTCTCCATCATCAGCGCCGTCGCCATCGCCCTAGTCTACCTTTTCACCGAAGCCC TTCCCCCGATCTACGAATCCTTCGGCTTCACCCGAAAACAAGCCTGCCTTCCCTTCATGGCCATCGGACTAGGTC TCTCCCTCGGTCTCCTCACCCGCTGTCTCGACCTCCGCATCATCACCCACCACCGAGCCCAAGGCCGACCACTGC TCCCCGAAGACAAATTGACCGGGTTCTGGATCGGCGCACCCATACTCGCTGTAGCGTTATGGCTTTTTGCCTGGA CCATTCCTCCCGCTGTCACGAATCTCCCTTGGCTTGTGTCGGTCGCAGCTCTCGTGCTGGCTGGGTATAGTCTCA ATGAGATGGACTACGTGCTGGGCGGGTATCTGACGGATAGTTATCTCAGCTATGCGGCGAGTGGTCTGGCGGCAT TGAGTCTGGTGAGGGCATTGTTGTCTGCTGCGTTGCCACTTATCTCGGCGCCTATGTTGGAGCGACTCGGGGCTA ATTATAGTGTTTCGGTGTTGGCCGCCGTAGCGACGGTATTTTGTGCTGTGCCGCCGTTATTTTCGAGGTACGGGA GGAGGATTAG |